Possible Orthologs for dme-mir-2279

droSim1 - 47 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
334 chr2R:265657-265782 + 64.93
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAA--------------GATTAATTTCACGCGAAGATATTTATTT---TTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGGCAATTTTCAATTAAATATCTGTGTGTGGAATTATTAAAAACAATGAGTTCAAAGGTTTAGTTTCACGTAAAGATATTTATTTTGTTTAAATTT-TCCCTAGAATAACCAGTATGCCGACATAAA-
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
2114 chrU:6568497-6568617 - 51.63
TCCGATGACCCATGGCGGGA-------GAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------CCAAAGCGGGAATACGGCGGGGATCATGAAATGCAAATG------------CAGTGAG--------TTTAAAACTTTATTTTCCCGCAAAGATATTTATTTTTACATTTGTCCCAAGAATAATCGGCGAACCAACATATA-
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...........................................AATTG------------CAGTGAG--------TTTCAAACT..................................................................2120.500.500.000.000.00
1541 chr2R:202542-202673 - 51.12
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAA----------TTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCAC--GCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCCATGAC-CAAGTCGGGAGAGCATTACGAA-TATGGCGGGGACCAAACTGTGTTCA---AACTGTGTTTGAAATTAAT--AAACAGTAAGTTCAAAAG--------TCTA-------GTTTTTTTTTAGGATAATTTGGTTATC-GTAAATAG
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
........C-TAAGTCGGTAGAGCATT................................................................................................................................1820.500.500.000.000.00
............................................................................................TTCAAAAG--------TCTT-------ATTTTTT.............................1920.500.500.000.000.00
206 chr2L:19986087-19986205 + 47.83
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTT--CACGCGAAGATATTTATTTTTACATTTGTCCC---------------TATAATAACCGGGGTGCCAACATACAT
----------------------------------ACAATGTTAAATAAAATATTTATGTGTTTGCTTATTTAAGGGATT---TTTATATACAAATGT----CTTAATACATTTTTTACAATTTATAGATTGTGTGTACCAACTTCGTTTAAAATCTATGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.................................................................................................................TTTACATTTTAAAGATTGTGT..........................2121.000.000.000.001.00
..................................GCAATGTTAAATAAAATG............................................................................................................1820.500.000.000.500.00
..................................................................TATTGAAGGCATT---TTTATATAC.....................................................................2220.500.500.000.000.00
.................................................................................................................TTTACATTTTAAAGATTGT............................1920.500.000.000.000.50
..................................................................TATTAAAGGCATT---TTTATATAC.....................................................................2220.500.500.000.000.00
1192 chrX:17018292-17018448 + 45.18
TCCGATGACCCATGGCGGGAGAGGATTATGAA-------------------AGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATA--------------------TTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTAATAGCCCAAGTCGGGAGAGGATTAGGAATATGGCGCAATAGGGCGCCGGGCAATATTGCATTGGAAGTCAGG--------------AAAATAATTA--TTTCGTGAAGCCAGTCTGCTTCGCCGCCGAAACTTTATCTGTATT---------TTAGAAACTTACTTTTCAACTACACT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................................................CATTGTACGTCAGG--------------AAAA........................................................................................1830.330.000.000.000.33
............AGTCGGTAGAGGATTGGG........................................................................................................................................................1860.170.000.000.000.17
1329 chr2h_random:1591715-1591833 - 44.8
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGT-GTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGT--CCCTATAATAACCGGGGTGCCAACATACAT
ATTAAA---TTGTGAT--TAAAGGTTAACAAATGAAGATTTTGATATCAATGTAAATATGATGAAATTAGTTAA-----TAACTGCACCTATGAATCTATATTCTAAAATACATTGCCTAATAATAAGC-----------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
634 chr3R:241031-241132 + 44.68
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTA------AATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTC---CCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGACACTTGAAACTTAGCACAACATTTTGTTATGTGATTTTGTTTGAAAAATCATTTTGTTGCAAACATATTTGAATGAAAATTTGTCATTCATTTAATAAC------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................................................CATGxGATTTTGTTTGAAA.......................................................................1829.000.003.505.500.00
........................................................TTTGGTTCTGTGATTTTGT.............................................................................1921.000.000.000.001.00
309 chr2L:21881456-21881579 + 44.27
TCCGATGA--CCC----------ATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTG------------TGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCAGATTCATCCGATTCCGAATAATTACGGATGAGAAATAATAAT-ACA---------------TTTATCAAAAGTCCAAAAT----------------------ATAAAGATAAAGTCAAATCTTTTTTTGTTTATTTGAGTTATTACTAAGGTTCCGCTA-----
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................................................ATTCCAAAAT----------------------AxAAAGATA.....................................................1830.330.000.330.000.00
1625 chr2R:6748730-6748885 - 44.05
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATT---ATTTAAAAGATTAATTTCACGCGAAG----ATAT------------TTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGTGCTCACC-CTGGCTGCCATCGCCTGTGAAGGACAGCCCC-AGTACAATCCCTACCTGCGCAATCCCTACTACAGGGATCTGTACTACAGGAACCGCGATCTCTACAATCTTCGCCGTTTCTACGATGGCTTCTATAAGAAGTACAATCC----CTACAT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...............CTGCCATCGCCTGCGACG.................................................................................................................................1820.500.000.000.500.00
1382 chr2h_random:2411667-2411838 - 43.32
TCCGATGACCCATGGCGGGAGAGGATTATGAA---------------------------------------------------------------------------AGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCATTGACCCAAGTCTGGAGAGGATTAGGAATATGACAGGGACTATGATTAAATGCAAATCATAGCTCAATCGCAGCCATACCGACGAGCCATCAAACTGCAGCCAAGGCAACATAAAATTGTATATCTGTGTGTGACATTAATAAAA---------------------------------------------TATAACCGGGGTGCCAACATAAA-
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...............CTAGAGAGGATTCGGAAT.........................................................................................................................................................................................1821.000.000.001.000.00
..CATCGxCCCAAGTCTGGAG.....................................................................................................................................................................................................1820.500.000.000.000.50
........................................................................................................CAAAGGCAAAATAAAATTGT..............................................................................................2030.330.330.000.000.00
1055 chrU:14356355-14356460 + 43.24
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGCCAATTTGAAATTTCATTTTTTTGCCAAAAATATTTTACCAGATTTTT----TGTGAAAAAAATATTTGGTATTTTGATC---AAAACATTCGGAATAATTACCCAAAT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................................TTTGAAATTTCATTTTTTTGCCAA.................................................................................24280.070.000.000.000.07
.....................................................ATTTGCCAAAGATATTTT........................................................................18220.090.090.000.000.00
.............................................TTTCATTTTTTTGACAAG................................................................................18200.100.000.000.100.00
......................................TTTGAAATTTCATTTTTTTGCCAAAAA..............................................................................27280.040.000.000.000.04
......................................TTTGAAATTTCATTTTTTTGCC...................................................................................22300.030.000.000.000.03
......................................TTTGAAATTTCATTTTCTTGCCAAAAA..............................................................................27280.040.000.000.000.04
......................................TTTGAAATTTCATTTTTTTGGCCAAAA..............................................................................27200.050.000.000.000.05
......................................TTTGAAATTTCATTTTTTTGCCAAAA...............................................................................26280.040.000.000.000.04
................................AGCCAATTTGAACTTTCTT............................................................................................19240.040.000.000.000.04
......................................TTTGAAATTTAATTTTTTTGGCAAA................................................................................25220.050.000.000.000.05
................................................................................................ATATTGGGTTTTTTGATC---..........................1820.500.500.000.000.00
........................................................................................................TATTTTGATC---AAAACATTCGGAAA............2420.500.000.000.000.50
2267 chrX:3240629-3240794 - 42.72
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAA--------------------------------------------------------------------AAGATTAATTTCACGCGAAGATATTTATT-TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACCCAAGTCGGGTGAGGATTGGGAA---------------------CATTGCGGGACCATGATTAAATGCAAATCTTACCTCAATCGCAGCCATGCCGACGCGCCTCCGCAGGTCACCGCCAAGGCAAAAAGTTTAGTTTAATTTCACGTGAAGATATTTATTCTTTTCAATTTTCTCGA-------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
............AGTCGGTAGAGGATTGGG......................................................................................................................................................................................1860.170.000.000.000.17
698 chr4:70117-70218 + 40.97
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAATTCAAATTGAAATTATATATTTCTGTACTAAAATATTTACT----TGTTCACACAT----GCAGTTTCTATTAAAGTTTACC---GAATGAGTAAGATTTAAACAAATGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................AAGTGAAATTTTATATTT........................................................................................1820.500.500.000.000.00
1842 chr3R:467577-467764 - 40.29
TCCGATGACCCATGGCGGGAGAGGATTATGA----------------------------------AAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-----TTTACATTTGTCC-CTATAATAACCGGGGTGCCAACATACAT---------------------
TCCGATGGCCCAAGGCGGGAGAGGATTGCTCAATCGCAGCCATACCGATGCGCCAGATAACCGCCAAGGCAATTTTAAATTAAATATCTGCGTGTGAAATTATTAAA---ATTCACCT---------ATATTTTTTGGAAACTT--GCTTGTCCACTACACTA--CGGAGTCCCCATCTGCCCCGAGGCGAATCCGATGCCGCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
614 chr3R:79591-79710 + 39.64
TCCG-ATGACCCATGGCGGGAGAG-GATTATGAAAGACAATTTG-AAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTGAATAATTCACAGTAGGTGAATGGCTGAAATAGCTAACTAGGATACTAAATATAGAGGTATA---------------------TCGCACACAACCATTTTTTTTTTTTTTTGTACACA-AGCAGCAGAGGA----AAATGCGA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
............................................................................................ACAACCATTTTTTTGATTT...................................1920.500.500.000.000.00
1422 chr2L:17063162-17063270 - 39.34
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT-------------
TATTATTGCTT-TAAAGGTGTACAAATATGAGTTATATTCTGAA--------------------------------------------TAAAGGTGTGTAT-TTTGCACTAGCAAATACA-TATATGTAGTTCAAATGCACATCATCTATCCTTGC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
752 chr4:757056-757148 + 38.48
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGC-----------------GAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGGCAATTTGAAATTATATTTTTGTATGTATTATAATATTTCAATTTATTTAGGCACCGTTAAAAACAATTATAAAATAAATTTATTTTTGCA-----------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................................................................TTTCTATTTATTTCGGCACCG.....................................................................2120.500.000.500.000.00
...................................................................................AGGCACCGTTAAAAACAA...........................................................1820.500.500.000.000.00
2309 chrX:15857302-15857391 - 36.17
TCCGATGACCCATGGCGGGAGAGGATTATGA-----------AAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGGCCCATGTCGGGAGAGGATTGGGTATATGGCGGGGACCATAAATAAAGGCAAATCATTTGTCTGTTTTACTGCTTTACAGATT----------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................................................ATTTGTCTGTTTAATTGC..........................................................................1830.670.000.330.330.00
.............................................................CATTTGACTGTTTGACTG...........................................................................1830.670.000.670.000.00
....ATGGCCCATGTCCGGACAGG..................................................................................................................................2020.500.000.000.500.00
............AGTCGGTAGAGGATTGGG............................................................................................................................1860.170.000.000.000.17
1058 chrU:14405093-14405167 + 35.69
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTAT-TTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGCCAATTTGAAATTTCATTTTTTTTCCCAAAAATATTTTCCCAGATTTTTTTTA-ACAAAAATATTTGGTTTT--------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
................................AGCCAATTTGAACTTTCTT.............................................................................................19240.040.000.000.000.04
......................................TTTGAAATTTCATTTTTTTGCC....................................................................................22300.030.000.000.000.03
......................................TTTGAAATTTCATTTTTTTGGCCAAAA...............................................................................27200.050.000.000.000.05
1047 chrU:13965458-13965530 + 34.52
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGCCAATTTGAAATTTAATTTCTTTGCCAAAAATATTTTCCCGGATT--TTTTGTGAAAATATAATTGCTTTT--------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................................................TTTGCCAAAGATGTTTTC.......................................................................18200.600.600.000.000.00
.....................................................ATTTGCCAAAGATATTTT........................................................................18220.090.090.000.000.00
......................................TTTGAAATTTAATTTTTTTGGCAAA................................................................................25220.050.000.000.000.05
2166 chrU:10257052-10257125 - 34.29
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGCCAATTTGAAATTTCATTTTTTTGCCAAAAATATTTTCCCAGATTTTTTGTGAAC-AAAATATTTGGTTTT--------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................................................TTTGCCAAAGATGTTTTC.......................................................................18200.600.600.000.000.00
......................................TTTGAAATTTCATTTTTTTGCCAA.................................................................................24280.070.000.000.000.07
.....................................................ATTTGCCAAAGATATTTT........................................................................18220.090.090.000.000.00
.............................................TTTCATTTTTTTGACAAG................................................................................18200.100.000.000.100.00
......................................TTTGAAATTTCATTTTTTTGCCAAAAA..............................................................................27280.040.000.000.000.04
......................................TTTGAAATTTCATTTTTTTGCC...................................................................................22300.030.000.000.000.03
......................................TTTGAAATTTCATTTTCTTGCCAAAAA..............................................................................27280.040.000.000.000.04
......................................TTTGAAATTTCATTTTTTTGGCCAAAA..............................................................................27200.050.000.000.000.05
......................................TTTGAAATTTCATTTTTTTGCCAAAA...............................................................................26280.040.000.000.000.04
................................AGCCAATTTGAACTTTCTT............................................................................................19240.040.000.000.000.04
......................................TTTGAAATTTAATTTTTTTGGCAAA................................................................................25220.050.000.000.000.05
...............................................................ACTATTTTCCAAGATTTTTTGT..........................................................22220.050.050.000.000.00
....................................................................................TGAAC-AAAATCTTTGGCT........................................1820.500.000.000.500.00


droSec1 - 50 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
768 super_55:122657-122779 + 66.13
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------AAGTAAACTTAAAATTATAAATATGTGTGTGAAATTAATAAACGGTAAGTTCGAAAGTTTAGTTTCACGCGAAAGTATTTATTTTTACATTTGTCCATAGAATAACCGGGGGGCCAACATAAA-
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
........................................TAAAATTATAAATAGGGG.................................................................................................1830.330.000.330.00
2576 super_79:111615-111742 - 61.7
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGA---AATTAAATATCTG--TGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------GGGAATCCTGTTAGGCGATCTGGCCGTATTAATAATTCGGTTCCCTGAGTAAGTTTGAAAGTTTAGTTTTGCGCAAAAAAATTTATTTTTACATTTGCCCATAGAATAACCAGGGTGCCAACATAAAT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
2450 super_59:159187-159342 - 60.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAA---------GACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCCATGAC-CAAGTCGGGAGAGCATTACGAATATGGCGGGGTCCAAACTGTGTTCAAA---CTGTGTTTGAAATTAATAAACAGTAAGTTCAAAAGTCTAGTTTCACGCGAAGGTATTTATTTTTACAATTTTCCCTGTAATAACCAGGATGCC----TACAT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
......................................................TCAAA---ATGTGTTTTAAAT.........................................................................................1830.330.000.330.00
............AGTCGGTAGAGCATTGCG......................................................................................................................................1820.500.000.000.50
..........CAAGTCGGTAGAGCATTG........................................................................................................................................1820.500.000.500.00
800 super_60:6932-7052 + 52.2
TCCGATGACCCATGGCGGGA-------GAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------CCAAGGCGGGAATACGGCGGGGATCATGAAATGCAAATG------------CAGTGAG--------TTTAAAACTTTATTTTCCCGCAAAGATATTTATTTTTACATTTGTCCCAAGAATAATCGGCGAACCAACATATA-
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.....................................GAATGCAAAGG------------CAGTGAG--------...........................................................................1830.330.000.330.00
.........CCAAGGCGGGTAAACGGCGG.........................................................................................................................2020.500.500.000.00
..............GCGGGAATGGGGCGGGGA......................................................................................................................1820.500.000.000.50
2959 super_1024:1262-1403 - 49.02
TCCGATGACCCATGGCGGGAGAGGATTATGAA--------AGACAATT--TGA-AA------TTAAATATCTG-------TGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTT----GTCCCTATAATAACCGGGGTG---CCAACATACAT
TCCAATGACCCAAGTCGGGAGAGGATTAGGAATATGGCGGAGACCATAAATGAAAATCATAACTCAATCGCAGCCATACCGACGGGA--------------------------------ACTTATTCGTCCACTAGGGCGTCACCATCTGCCCCGAGGCGATCCCGATTCCGCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........AAGTCGTGAGAGGATTAGGA...............................................................................................................................................2080.130.000.130.00
1834 super_8:2871289-2871434 - 46.24
TCCGATGACCCATGGCGGGAGAGGATTATGAA--------AGACAATT--TG-AAATTA------AATATCTG-------TGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTA--------------CATTTGTCCCTATAATAAC----------CGGGGTGCCAACATACAT
TCCAATGACCCAAGTCGGGAGAGGATTAGGAATATGGCGGAGACCATAAATGAAAATCATAACTCAATCGCAGCCATACCGACGGGA--------------------------------ACTTATTCGTCCACTAGGGCGTCACCATCTGCCCCGACGCGATCCCGATTCCGCCGGTG-------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........AAGTCGTGAGAGGATTAGGA................................................................................................................................................................2080.130.000.130.00
2458 super_61:147828-147956 - 46.06
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATGGTTTCCCAATCGGTACCGA-----------AACTTTTTGAAATTATTGATTATTATAATAAATTACTAAATAAAATACATTCAATCGAAAATCGCTACATTATCAGTCGTCGACTAGATTGCATAATTGCAAACT---AT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
2710 super_116:61975-62054 - 45.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------------------------------------AACTCAGTCAAAAGTTTAATTTCAGACGAAGGTATTTATTTTTAAATTTATCCCTGGAATAGCCAGGGTGCCAACATAAA-
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............................................................................................ATTTATTTTTATTTTTATC.............................1940.250.000.250.00
135 super_6:875685-875764 + 45.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------------------------------------AACTCAGTCAAAAGTTTAATTTCAGACGAAGGTATTTATTTTTAAATTTATCCCTGGAATAGCCAGGGTGCCAACATAAA-
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............................................................................................ATTTATTTTTATTTTTATC.............................1940.250.000.250.00
1613 super_11208:120-236 + 45.39
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TAC--------------------------GAATTGGAATTTTCTATTAAATACGATATTGTCAATATTTTTATGAAGTAAATTTTGCGTTCACATTAGCATATTTAGGCATGTATATCTATTAGCAATTGTGTTAAATTTCAT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.......................................................................................................TTAGTCATGTATATCTATTAGCA.................2321.501.500.000.00
TAC--------------------------GAATTGGAATTTTATATTAAATT...........................................................................................2640.500.250.250.00
TAC--------------------------GAATTGGAATTTTATATT................................................................................................2140.500.250.000.25
..............................AATTxTAATTTTCTATTAA..............................................................................................1830.670.000.670.00
......................................................................TATGAAGTAAATTTTGTGTTCAC..................................................2340.250.000.250.00
......................................TTTTATATTAAATACGATATTGTCAA...............................................................................2640.250.000.250.00
........................................................................TGAAGTAAACTTTGTGTTCA...................................................2040.250.250.000.00
......................................................................TATGAGGTAAATTTTGTGTTCAC..................................................2340.250.000.250.00
..............................................................................................................TATATATCTATGAGCAATTGT............2120.500.500.000.00
..........................................................................................CACATTAGCATATTTAGTCATG...............................2240.250.000.000.25
.AC--------------------------GAATTGGAATTTTATATTAAATT...........................................................................................2540.250.250.000.00
.............................................TTAAATTCGATATTGTCAATA.............................................................................2140.250.000.250.00
......................................................................TATGAAGTAAATTTTGTGTTCACATT...............................................2640.250.000.250.00
...................................................................TTTTATGAAGGAAATTTTGTGTTC....................................................2440.250.250.000.00
........................................................................TGAAGGAAATTTTGTGTTCAC..................................................2140.250.000.000.25
..................................................................TTTTTATGAAGTAAATTTTGTGTTCAC..................................................2740.250.000.250.00
1949 super_18:1199695-1199844 - 45.21
TCCGATGACCCATGGCGGGAGAGGATTATGAAAG-----------------------------ACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTT----TACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AAGA-------ATCGTTGAAGAGAATTATCTAGCTAAAGGTAACAGTAAACCTAGTTTAGATCGCATCTTGAAGGTACTTTTCT------------ATTTTAAA-CTTTACTTTTCGAAAAAAAATTTACTACACCTAATGTATAACTATTTAAAATCCGGTGTGCTAA-------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........................................................................................................TTGCATTTCGAAAAAAAA...................................................1840.250.000.250.00
2231 super_40:68566-68695 - 44.82
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTT-TTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TAGATGAAACTATAACGCTT-ACGACCCTAAAAACATATATGAATTTAA---TGTAAATGTAAAATCATGTATAAAGTCACTTTGCTT----TATATCCGTCTTCCACGCACTTCCCTATGTTTG-----GTAAT-AAGTATAT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................................AAGTCACTTTGxTC----TATAT...............................................1841.250.001.250.00
.............................................................................................ATATCCGTCTTCCACGCACTT..............................2120.500.000.500.00
......................................TATGAATTTAA---TGTAAATGT...................................................................................2020.500.000.000.50
2085 super_28:838534-838657 - 43.67
TCCGATG-ACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCAGATTCATCCGATTC--CGAATAATTACGGATGAGAAATAATA-----ATA--CATTTATCAAA-AGTCCAAAATATTAATATAGAGTCAA---ATCTGTTTTT--GTTTATTTGAGTTATTACTAAGGTTCCGCTA-----
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................................................................TCAGTTATT--GTTTATTTGA..........................1920.500.000.000.50
2575 super_79:111513-111659 - 43.66
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT------------------------------------------------------------------------------------------------------
T--------------------------------------------------------------------------------------------------ATTTTTACATTTGCCCATAGAATAACCAGGGTGCCAACATAAATTAAATTTATGTTGGAAGTCTTAAAATCATATTTCTTCAGGCAATTCCGCTCTAAACTCACCACTGAAGAATCAGTGAGTCATGAGTCAAGAGTCAAGATCTC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
1249 super_293:2801-2988 + 39.89
TCCGATGACCCATGGCGGGAGAGGATTATGA----------------------------------AAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-----TTTACATTTGTCC-CTATAATAACCGGGGTGCCAACATACAT---------------------
TCCGATGGCCCAAGGCGGGAGAGGATTGCTCAATCGCAGCCATACCGATGCGCCAGGTAACCGCCAAGGCAATTTTAAATTAAATATCTGCATGTGAAATTATTAAA---ATTCACCT---------ATATTTTTTGGAAACTT--CCTTGTCCACTACACTA--CGGAGTCCCCATCTGCTCCGAGGCGAATCCGATGCCGCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................................................CAAGGGAACCGCCAAGGC......................................................................................................................................1850.200.000.200.00
.............................................................................................................................................................................CGATCTGxTCCGAGGCGAA............1840.250.000.250.00
..CGATGGCCCAAGGCGGGAGAG.....................................................................................................................................................................................2180.130.000.130.00
1782 super_6:522886-523073 - 39.89
TCCGATGACCCATGGCGGGAGAGGATTATGA----------------------------------AAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-----TTTACATTTGTCC-CTATAATAACCGGGGTGCCAACATACAT---------------------
TCCGATGGCCCAAGGCGGGAGAGGATTGCTCAATCGCAGCCATACCGATGCGCCAGGTAACCGCCAAGGCAATTTTAAATTAAATATCTGCATGTGAAATTATTAAA---ATTCACCT---------ATATTTTTTGGAAACTT--CCTTGTCCACTACACTA--CGGAGTCCCCATCTGCTCCGAGGCGAATCCGATGCCGCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................................................CAAGGGAACCGCCAAGGC......................................................................................................................................1850.200.000.200.00
.............................................................................................................................................................................CGATCTGxTCCGAGGCGAA............1840.250.000.250.00
..CGATGGCCCAAGGCGGGAGAG.....................................................................................................................................................................................2180.130.000.130.00
2914 super_461:4208-4305 - 39.72
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCT--ATAATAACCGG--------GGTGCCAACATACAT
-------------------------------------------------------GGGTTTTAAATTTTTCAAAAGATTTATTATGTGCGTCGCCTTTTGTATTAATTTTTGATATTTTGCAAAATCTTGAATGAGCTTGCGGTAATATACGC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
............................................................GTAAATTTTCCAAAAGATTT.........................................................................2020.500.000.500.00
318 super_19:499523-499653 + 39.24
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAAC-------------------------CGGGGTGCCAACATACAT
TTTGACC------------AGGGGATACTGACGAATGCATTAAATATGCAAATTT----GCAAACTTATTAAATGA----ATTTTA---------ATTTATTATTATTT------CTCTGACAAAGCAAACAAAAAGCCCACAGCAAGTATAACATGTTAATT--AAC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................................ATATTAAATGA----AxTTTA---------AT.......................................................................1870.140.000.140.00
........................................................................................................................ACTAAGCAAACAAAAAGC..............................1820.500.000.500.00
286 super_18:304623-304704 + 38.99
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------------------------------GACAATGTTAAATTAAATATTTATGTGTTTGCTTATTTAAGGGATTTTT-----------ATGTGTCTTAATACATTTTTTAAATTT-----------------ATAGCT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..................................................................TATTTATGTGATTTTT-----------AT................................................1834.000.003.001.00
..................................................................TATTTATGCGATTTTT-----------AT................................................1820.500.000.000.50
1656 super_13584:276-459 + 38.52
TCCGATGACCCATGGCGGGAGAGGATTATGAA-------AGACAATTTGAAATTAAATATCTGT-------------------------------------------GTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACCCAAGTCGGGTGAGGATTGGGAACATTGCGGGACCATGATTAAATGCAAATCTTACCTCAATCGCAGCCATGCCGACGCGCCTCCGCAGGTCACCGCCAAGGCAAAAAGTTT---AGTTTAGTTTCACGTGAAGATATTTATTCTTTTCAATTTTCCCGAGTAAATCGCGAGTCCGAA-------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................................................................................................................GTGAAGACATTTATTTTT.......................................1870.140.000.140.00
51 super_4:2517889-2518072 + 38.52
TCCGATGACCCATGGCGGGAGAGGATTATGAA-------AGACAATTTGAAATTAAATATCTGT-------------------------------------------GTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACCCAAGTCGGGTGAGGATTGGGAACATTGCGGGACCATGATTAAATGCAAATCTTACCTCAATCGCAGCCATGCCGACGCGCCTCCGCAGGTCACCGCCAAGGCAAAAAGTTT---AGTTTAGTTTCACGTGAAGATATTTATTCTTTTCAATTTTCCCGAGTAAATCGCGAGTCCGAA-------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................................................................................................................GTGAAGACATTTATTTTT.......................................1870.140.000.140.00


droYak2 - 54 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
9623 chr2h_random:1837227-1837349 - 62.61
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------AAGACAACTTAAATTTTTATATCTGTGTGGGAAATTAAGAAACAGTGAGTTCGAAAATTTAGTTTCGTGTAAAGTTATTTATTTCTGCATTTGTCCCTAGAATAACCGAGGTCCCAACATAAA-
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.......................................................................................ATTTAGTTTCTTGTTAAGT.................................................1920.500.000.000.500.000.00
11041 chr2L_random:2961681-2961805 - 56.29
T-CCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA---------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACCGACGATCT---------------------------TTTAAATTTATCAATATGGGCGTTAAATTAAAAACTGAGTTAAAAAATTTAGTGTCACATAAAGATGTTTACTTATGCATTTATCCTTAGAGTAATCGGGGTCTCAACATAAA-
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
566 chr2h_random:3036408-3036527 + 55.35
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGGGAACTTAAATTTATATATCTGTGTGGGAAAATAAGAAACAGTGTGTTAGATAATTTAGTGTCGGGTAAAACTATTTATTTCTGCATTTAACCCTAGAATAACCGTGGTCCCAACA---AT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................................................................................................................................AAGAACCGTCGTCCCAAC......1881.130.000.000.000.131.00
..................................................................................AGATAATTTAGTGTCGGGTAAAA..................................................2380.130.130.000.000.000.00
........................................................................................TTTAGTGTCGGGTAAAACTATTTAT..........................................2580.130.000.000.130.000.00
.................................................................ATAAGAAACAGTGTGCTAGATAATT.................................................................2580.130.000.000.130.000.00
..................................................TGTCTGTGTGGGTAAAT........................................................................................17110.090.000.000.000.090.00
..........................................................................................TAGAGTCGGGTAAAATTATTTATT.........................................2480.130.000.000.000.000.13
................................................................AATAAGAAACACTCTGTT.........................................................................18110.090.000.000.000.090.00
...........................................................GGGAAAATAAGAAACAGTGTGTTAG.......................................................................25110.090.000.000.090.000.00
567 chr2h_random:3046355-3046472 + 55.32
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGGGAACTTAAATTTATATATCTGTGTGGGAAAATAAGAAACAGTGTGTTAGATAATTTAGTGTCGGGTAAAACTATTTATTTCTGCATTTAACCCTAGAATAACCGTGGTCCCAACA-----
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................................................................................................................................AAGAACCGTCGTCCCAAC......1881.130.000.000.000.131.00
..................................................................................AGATAATTTAGTGTCGGGTAAAA..................................................2380.130.130.000.000.000.00
........................................................................................TTTAGTGTCGGGTAAAACTATTTAT..........................................2580.130.000.000.130.000.00
.................................................................ATAAGAAACAGTGTGCTAGATAATT.................................................................2580.130.000.000.130.000.00
..................................................TGTCTGTGTGGGTAAAT........................................................................................17110.090.000.000.000.090.00
..........................................................................................TAGAGTCGGGTAAAATTATTTATT.........................................2480.130.000.000.000.000.13
................................................................AATAAGAAACACTCTGTT.........................................................................18110.090.000.000.000.090.00
...........................................................GGGAAAATAAGAAACAGTGTGTTAG.......................................................................25110.090.000.000.090.000.00
6631 chrU:11905822-11905943 + 54.87
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA-----------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------AAGGCAACATAAAATTATACATTTTTACCTTTAACTAAGGCCCGTGAGTATAAAATTTTATTGTCACGTCAATTTATTTAGTTATGCATTTGTCCTTAGAGTAACTTGGGTCCCAACATAAA-
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
14542 chrU:3064832-3064953 - 54.17
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA-----------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------AAGGCAACATAAAATTATACATTTTTACCTTTAACTAAGGCCCGTGAGTATAAAATTTTATTGTCACGTCAATTTATTTAGTTACGCATTTGTCCTTAGAGTAACTTGGGTCCCAACATAAA-
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
565 chr2h_random:3033223-3033337 + 53.91
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATTTAAATTTATATATCTGTGTGGGAAAATAAGAAACAGTGTGTTAGATAATTTAGTGTCGGGTAAAACTATTTATTTCTGCATTTAACCCTAGAATAACCGTGGTCCCAACA---AT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................................................................................................................................AAGAACCGTCGTCCCAAC......1881.130.000.000.000.131.00
..................................................TGTCTGTGTGGGTAAAT........................................................................................17110.090.000.000.000.090.00
...........................................................GGGAAAATAAGAAACAGTGTGTTAG.......................................................................25110.090.000.000.090.000.00
..................................................................................AGATAATTTAGTGTCGGGTAAAA..................................................2380.130.130.000.000.000.00
................................................................AATAAGAAACACTCTGTT.........................................................................18110.090.000.000.000.090.00
..........................................................................................TAGAGTCGGGTAAAATTATTTATT.........................................2480.130.000.000.000.000.13
.................................................................ATAAGAAACAGTGTGCTAGATAATT.................................................................2580.130.000.000.130.000.00
........................................................................................TTTAGTGTCGGGTAAAACTATTTAT..........................................2580.130.000.000.130.000.00
574 chr2h_random:3074583-3074699 + 53.9
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA------------TTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------------------AGGGAACTTAAATTTATATATCTGTGTGGGAAAATAAGAAACAGTGTGTTAGATAATTTAGTGTCGGGTAAAACTATTTATTTCTGCATTTAACCCTAGAATAACCGTAGTCCCAAC------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................................................................................................................................AAGAACCGTCGTCCCAAC------1881.130.000.000.000.131.00
..................................................................................AGATAATTTAGTGTCGGGTAAAA..................................................2380.130.130.000.000.000.00
........................................................................................TTTAGTGTCGGGTAAAACTATTTAT..........................................2580.130.000.000.130.000.00
.................................................................ATAAGAAACAGTGTGCTAGATAATT.................................................................2580.130.000.000.130.000.00
..................................................TGTCTGTGTGGGTAAAT........................................................................................17110.090.000.000.000.090.00
..........................................................................................TAGAGTCGGGTAAAATTATTTATT.........................................2480.130.000.000.000.000.13
................................................................AATAAGAAACACTCTGTT.........................................................................18110.090.000.000.000.090.00
...........................................................GGGAAAATAAGAAACAGTGTGTTAG.......................................................................25110.090.000.000.090.000.00
8717 chrX:3321599-3321716 + 49.39
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTT----GAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
C---------CATCGCGCGAAAGTAGCATGCACTGAAAGTAGCAAGAATTTAAATGTATTTTTTTTTATTGATTGAATAGACCTATTTG----GAAAATATTTAGTTATACATTTAAGCTTCTCACC----------------ACAG
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................................CTTTTTTATxTTGATTGAA......................................................................1821.000.500.000.000.000.50
.................................................................TTATTGATTAAAAAGACC................................................................1820.500.000.000.000.000.50
.............................................GAATTTxxATGTATTTTTTTTT................................................................................2030.330.330.000.000.000.00
17000 chrU:24183856-24183985 - 48.94
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACA---------ATTTGAAATTAAATATCTGTGTGTGAAATTATTTA----------------------AAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------------------AGGGTTTTTAAAGACTGATGTTGGATTTAGAAAACTCAAACCTTTATATTGGAAAATTTGATTTACTTATTTATTTACTGATAAAAATTCAATTCGTGCAGAACTATATCTATTTACATACTTCCCCATA-----------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................TGATGTTGGATTTAGAAAACTCAAACCT..............................................................................................................2874.570.000.000.000.004.57
....................................TGATGTTGGATTTAGAAAACTCAAACC...............................................................................................................2770.430.290.000.000.000.14
...........................................................................................TTATTTACTGATAAAAATTCAATTGG.........................................................2670.290.290.000.000.000.00
..........................................TGGATTTAGAAAACTCAAACATTTA...........................................................................................................2570.290.290.000.000.000.00
................................................TAGAAAACTCAAACATTTATATGGGA....................................................................................................2630.670.670.000.000.000.00
.....................................................................................................................TGCAGAACTATATCTATTTACATCCT...............................2660.330.000.000.000.000.33
....................................TGATGTTGGATTTAGAAAACTCAAACATT.............................................................................................................2970.290.000.000.000.000.29
.......................GGTTTTTTAAGTCTGATG.....................................................................................................................................1860.330.000.000.000.000.33
...........................................................................................................ATTCAATTCGTGCAGAACTAT..............................................2160.330.000.000.000.000.33
.........................TTTTTAAAGGCTGATGTTGG.................................................................................................................................2070.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAAACCG..............................................................................................................2870.140.000.000.000.000.14
....................................TGATGTTGGATTTAGAAAACTC....................................................................................................................2270.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAA........................................................................................................................1870.140.140.000.000.000.00
.......................GGTTTTTTAAGTCTGATGT....................................................................................................................................1960.170.000.000.170.000.00
...............................................................................................TTACTGATAAAATTTCAATTTGT........................................................2350.200.200.000.000.000.00
.............................................................................................................TCAATTTGTGCAGAACTATATCTATT.......................................2660.170.170.000.000.000.00
...........................................................................................TTATTTACTGATAAAATTTCAATTTG.........................................................2650.200.200.000.000.000.00
..........................................TGGATTTAGAAAACTCAAAC................................................................................................................2070.140.140.000.000.000.00
..........................TTTTAAAGACTGATGTTGGATT..............................................................................................................................2270.140.140.000.000.000.00
............................................................................................TATTTACTGATAAAATTTCAATTTGTGC......................................................2850.200.200.000.000.000.00
..............................AAAGACTGATGTTGGATTTAGAAAAC......................................................................................................................2670.140.000.000.140.000.00
...........................................................................................TTATTTACTGATAAAATTTCAATTTGT........................................................2750.200.200.000.000.000.00
..............................................TTTAGAAAACTCAAACATTTATATGG......................................................................................................2630.330.330.000.000.000.00
................................................................................................................ATTTGTGCAGAACTATATCTATTT......................................2460.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAACCCC..............................................................................................................2830.330.000.000.000.000.33
....................................TGATGTTGGATTTAGAAAACTCA...................................................................................................................2370.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAGACCT..............................................................................................................2870.140.000.000.000.000.14
16428 chrU:19642467-19642562 - 48.43
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGAT-TAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-----------------------------------------------AGATTACTCTTAGGAAAATTAGTTAAGAAATGTAATGTGTTGTAAAGTTATTCATTTTTGCATTTGTCCCAAGAGTAACCGGGATCCCAACATAAA-
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
7660 chrU:20429492-20429645 + 48.16
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAA--------TTT---GAAATTAAATATCTGTGTGTGA---------------AATTATTTA-----AAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCG---GGGTGCCAACATACAT
---------------------AGGGTTTTTAAAGACTGATGTTGGATTTACAAAACTCAAACCTTTATATTGGAAAATTTCATTTACTTATTTATTTACTGATAAAAATTCAATTCATGCAGAACTATATCTATTTACATCCTTCCCCTTATATACCATATGGGTAATACCATTC--
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................TGATGTTGGATTTAGAAAACTCAAACCT.................................................................................................................2874.570.000.000.000.004.57
.............................................................................................................................TATATCTATTTACATCCTTCCCCT............................2460.830.830.000.000.000.00
.............................................................................................................................TATATCTATTTACATCCTTCCCCTTA..........................2660.830.830.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAAACC..................................................................................................................2770.430.290.000.000.000.14
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCATA.................2760.500.500.000.000.000.00
.............................................................................................................................TATATCTATTTACATCCTTCCCCTTATA........................2860.500.170.000.170.170.00
...........................................................................................TTATTTACTGATAAAAATTCAATTGG............................................................2670.290.290.000.000.000.00
..........................................TGGATTTAGAAAACTCAAACATTTA..............................................................................................................2570.290.290.000.000.000.00
.......................................................................................................................................TACATCCTTCCCCTTATATACCATA.................2560.330.330.000.000.000.00
.....................................................................................................................TGCAGAACTATATCTATTTACATCCT..................................2660.330.000.000.000.000.33
.......................GGTTTTTTAAGTCTGATG........................................................................................................................................1860.330.000.000.000.000.33
....................................TGATGTTGGATTTAGAAAACTCAAACATT................................................................................................................2970.290.000.000.000.000.29
...........................................................................................................ATTCAATTCGTGCAGAACTAT.................................................2160.330.000.000.000.000.33
.........................TTTTTAAAGGCTGATGTTGG....................................................................................................................................2070.140.140.000.000.000.00
...........................................................................................................................................TCCTTCCCCTTATATACCATATGGGT............2660.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAAACCG.................................................................................................................2870.140.000.000.000.000.14
...................................................................................................................................TATTTACATCCTTCCCCTTAT.........................2160.170.170.000.000.000.00
..............................................................................................................................................TTCCCCTTATATACCATA.................1860.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTC.......................................................................................................................2270.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAA...........................................................................................................................1870.140.140.000.000.000.00
.......................GGTTTTTTAAGTCTGATGT.......................................................................................................................................1960.170.000.000.170.000.00
.............................................................................................................TCAATTTGTGCAGAACTATATCTATT..........................................2660.170.170.000.000.000.00
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCAT..................2660.170.170.000.000.000.00
..........................................TGGATTTAGAAAACTCAAAC...................................................................................................................2070.140.140.000.000.000.00
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCG...................2560.170.170.000.000.000.00
..........................TTTTAAAGACTGATGTTGGATT.................................................................................................................................2270.140.140.000.000.000.00
.............................................................................................................................TCTATCTATTTACATCCTTCCCCTTAT.........................2760.170.170.000.000.000.00
..............................AAAGACTGATGTTGGATTTAGAAAAC.........................................................................................................................2670.140.000.000.140.000.00
................................................................................................................ATTTGTGCAGAACTATATCTATTT.........................................2460.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCA......................................................................................................................2370.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAGACCT.................................................................................................................2870.140.000.000.000.000.14
15615 chrU:12757072-12757225 - 48.16
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACA---------ATTTGAAATTAAATATCTGTGTGTGAAATTATT-----------------T-----AAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGG---GGTGCCAACATACAT
---------------------AGGGTTTTTAAAGACTGATGTTGGATTTAGAAACCTCAAACCTTTATATTGGAAAATTTCATTTACTTATTTATTTACTGATAAAAATTCAATTCGTGCAGAACTATATCTATTTACATTCTTCCCCTTATATACCATATGGGTA--ATCCCATAC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................TGATGTTGGATTTAGAAAACTCAAACCT.................................................................................................................2874.570.000.000.000.004.57
.............................................................................................................................TATATCTATTTACATCCTTCCCCT............................2460.830.830.000.000.000.00
.............................................................................................................................TATATCTATTTACATCCTTCCCCTTA..........................2660.830.830.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAAACC..................................................................................................................2770.430.290.000.000.000.14
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCATA.................2760.500.500.000.000.000.00
.............................................................................................................................TATATCTATTTACATCCTTCCCCTTATA........................2860.500.170.000.170.170.00
...........................................................................................TTATTTACTGATAAAAATTCAATTGG............................................................2670.290.290.000.000.000.00
..........................................TGGATTTAGAAAACTCAAACATTTA..............................................................................................................2570.290.290.000.000.000.00
.......................................................................................................................................TACATCCTTCCCCTTATATACCATA.................2560.330.330.000.000.000.00
.....................................................................................................................TGCAGAACTATATCTATTTACATCCT..................................2660.330.000.000.000.000.33
.......................GGTTTTTTAAGTCTGATG........................................................................................................................................1860.330.000.000.000.000.33
....................................TGATGTTGGATTTAGAAAACTCAAACATT................................................................................................................2970.290.000.000.000.000.29
...........................................................................................................ATTCAATTCGTGCAGAACTAT.................................................2160.330.000.000.000.000.33
.........................TTTTTAAAGGCTGATGTTGG....................................................................................................................................2070.140.140.000.000.000.00
...........................................................................................................................................TCCTTCCCCTTATATACCATATGGGT............2660.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAAACCG.................................................................................................................2870.140.000.000.000.000.14
...................................................................................................................................TATTTACATCCTTCCCCTTAT.........................2160.170.170.000.000.000.00
..............................................................................................................................................TTCCCCTTATATACCATA.................1860.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTC.......................................................................................................................2270.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAA...........................................................................................................................1870.140.140.000.000.000.00
.......................GGTTTTTTAAGTCTGATGT.......................................................................................................................................1960.170.000.000.170.000.00
...............................................................................................TTACTGATAAAATTTCAATTTGT...........................................................2350.200.200.000.000.000.00
.............................................................................................................TCAATTTGTGCAGAACTATATCTATT..........................................2660.170.170.000.000.000.00
...........................................................................................TTATTTACTGATAAAATTTCAATTTG............................................................2650.200.200.000.000.000.00
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCAT..................2660.170.170.000.000.000.00
..........................................TGGATTTAGAAAACTCAAAC...................................................................................................................2070.140.140.000.000.000.00
.....................................................................................................................................TTTACATCCTTCCCCTTATATACCG...................2560.170.170.000.000.000.00
..........................TTTTAAAGACTGATGTTGGATT.................................................................................................................................2270.140.140.000.000.000.00
.............................................................................................................................TCTATCTATTTACATCCTTCCCCTTAT.........................2760.170.170.000.000.000.00
..............................AAAGACTGATGTTGGATTTAGAAAAC.........................................................................................................................2670.140.000.000.140.000.00
............................................................................................TATTTACTGATAAAATTTCAATTTGTGC.........................................................2850.200.200.000.000.000.00
...........................................................................................TTATTTACTGATAAAATTTCAATTTGT...........................................................2750.200.200.000.000.000.00
................................................................................................................ATTTGTGCAGAACTATATCTATTT.........................................2460.170.170.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCA......................................................................................................................2370.140.140.000.000.000.00
....................................TGATGTTGGATTTAGAAAACTCAGACCT.................................................................................................................2870.140.000.000.000.000.14
8331 chrU:26258556-26258684 + 47.26
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATT-TATTTTTACATTTGTCCCTATAATAACCGGGGTG-----CCAA--CATACAT
TTCAATAATACTTGAT-----------ATTGAAGATGCTGTACAATTAAATATTTTTAT--AAGGTT---------ATTATTTTCAATAAAAATTACTTGATTGTTACAACTTTGGTTAAAGTTTTCGGAGTGATATTCCAAGTTATACAT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
511 chr2h_random:2718079-2718196 + 45.65
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAA---ATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTT----ATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GTCTTATATTTATAGATAGTGACAATAATGCAATT--ATATCAATTTAATTTAATGTTGTGAGTGTTATTACTTGAAATATATTATTCGTCTGATTGTGTTGTTCGATTATTTCTTTTGT------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
............................................................................................................TATTTCATTTGT------------------------------1860.170.000.000.000.000.17
6993 chrU:14805327-14805493 + 44.81
TCCGATGACCCATGGCGGGAGAGGAT---------------------TATGAAAGACAATTTGAA-------------------------ATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTAATGACCCA----AAGAGAGGATTTGGAATATGACGGGGAGCATGATAAAA------TGGAAGTTATTGTCCATTTAAGCCATACCGACGAGATATCCGGTTGC-AACTTATTT--------AGTGTTGTGTAAAGTTATTTATTTCTGCATTTGTCCCTACAACAACCGGGGCCCCAACATG---
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
14605 chrU:3507136-3507290 - 42.11
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACAT---------------TTGTCCCTATAATAACCGGGGTGCCA----ACATACAT
GAAATTTGTTTATTAAAATCGGGTAGTATTAAGATTAATTAAAAAATAA-TAACTTGTTATAA--TTATCA--AAAATTTATTCT--TCATATATAAGAGTTTTTACATAAATAAAAAATTATATTATACTTAAAATAGTTTAATTACCATATTACATATGT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
9861 chr2h_random:3656893-3656993 - 41.84
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCA-----CGCGA-AGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------------GAAGTATGAAAGGCTATTCTAAATTAAATAAATATGTAGACCTTCCAGCCAACGGTCTTTTTCAACAAACGCAAAAACTCTATATTCATTCATTTTC--------------------------ACCT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..................................................TAAATATGTAGACCTTCCAGCCAACGG........................................................................2721.000.500.000.000.000.50
.....................................................ATATGTAGACCTTCCAGCCAA...........................................................................2120.500.000.000.000.000.50
..................................................TAAATATGTAGACCTTCCAGC..............................................................................2120.500.000.000.500.000.00
......................................................TATGTAGACCTTCCAGCCAAC..........................................................................2120.500.000.000.000.000.50
11777 chr2R:18436388-18436510 - 41.51
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT-----------------------------
TCATATTATTTATTTATTTAAAT-------------------------------------------ATATTAAATTATACAAATTATTTTGGGATAATATTTTTAGCATTTTACCTTT------TTGTGAAACCAACATAAGTTAACTTTTATCAAAATAGAATTGTTATTA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
........TTTATTTATTTAAAT-------------------------------------------ATACT.....................................................................................................2020.500.000.000.000.000.50
............................................................................................GATAATATTTGTAGCAATT.............................................................1920.500.000.000.500.000.00
10201 chr2L:19956959-19957053 - 40.71
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGT---GAAATTATTTAAA---AGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------------------AGGATGAAGGAAGGTGATTTGAAATTATATATATGTATACCCCACAATCATATAAATCTAGTGTCGTTCTACGCACA-GTGCTTCCCTTTGGATCT--------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
10043 chr2L:16221487-16221573 - 38.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTA-----AAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---GGCAGCTTATGTCGTCAGATTTTTATCAAATTAAAACCGAAATTACATATGTGTGTGTGCAAATGTATATTGTCAAATAATAATTGC----------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head


droEre2 - 85 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1760 scaffold_4845:21278391-21278511 + 50.8
TCCGATGACCCA---TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT---TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CTCCATAACTCAACTTATCTTAATCGGATTTTGAAGTGGCAT--ACCTCTAAATGTTTGTG-GTGCAATTATCTAAAAAACTGCATTCAAATTTAAAAATTTATTTTTTTTACATTTTTTTGTA-------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...............AATCTTAATCGGATTTTGAAGTGGC.............................................................................................................25160.190.060.000.000.13
...............TATCTTAATCGGATTTTGAAGTGG..............................................................................................................24210.140.050.000.000.10
...................TTAATCGGATTTTGAAGTGGC.............................................................................................................21280.070.000.000.000.07
...............TATCTTAATCGGATTTTGAAGTGGCA............................................................................................................26210.050.000.000.000.05
...........................ATTTTGAAGTGGCAT--ACCT.....................................................................................................19320.030.000.000.000.03
...............TATCTTACTCGGATTTTGAAGTGGC.............................................................................................................25210.050.000.000.000.05
..............................................................................ATCTGCATTCAAATTTAAAA...................................................20240.040.000.000.000.04
..........CAACTTATCTTAGTCGGAT........................................................................................................................19250.040.040.000.000.00
...............TATCTTAATCGTATTTTGGAGTGGC.............................................................................................................2590.110.000.000.000.11
......AACTCAACTTATCTTAATCGGATTTTG....................................................................................................................27200.050.000.000.000.05
................................GAAGTGGCAT--ACCTCTAAATGT.............................................................................................22370.030.000.000.000.03
......................................................................................TTTAATTTAAAAATTTATT............................................19110.090.090.000.000.00
......AACTCAACTTATCTTAATCGG..........................................................................................................................21240.040.000.000.000.04
...............AATCTTAATCGGATTTTGACGTGGC.............................................................................................................25180.060.000.000.000.06
...............TATCTTAATCGGATTTTGAAGTGGC.............................................................................................................25210.050.000.000.000.05
..............TTATCTTAGTTGGATTTTGA...................................................................................................................20110.090.000.090.000.00
..................ATTAATCGGATTTTGAAGT................................................................................................................19200.050.050.000.000.00
...................................GTGGCAT--ATCTCTAAATGT.............................................................................................19410.020.020.000.000.00
.........................................................................TAAAAATCTGCATTCAAATTTATAAAT.................................................27450.020.000.000.000.02
...........................ATTTTAAAGTGGAAT--ACCT.....................................................................................................19260.040.000.000.000.04
...............TATCTTGATCGGATTTTGATGTG...............................................................................................................23150.070.000.000.000.07
..........CAACTTATCTTAATCGGAT........................................................................................................................19250.040.040.000.000.00
..........................GATTTTGAAGCGGAAT--ACCTCTAAAT...............................................................................................26190.050.000.000.000.05
......AACTCAACTTATCTTATTCGGA.........................................................................................................................22240.040.000.000.000.04
...........AACTTATCTTAATCGGAT........................................................................................................................18250.040.000.000.000.04
.....TAACTCAGCTTATCTTAATCGGAATT......................................................................................................................26110.090.090.000.000.00
.....................................................................................TTCAAATTTGCAAATTTATTTTTTT.......................................25100.100.000.000.000.10
...........................ATTTTGAAGTGGCGT--ACCT.....................................................................................................19340.030.000.000.000.03
...........AACTGATCGTAATCGGAT........................................................................................................................18130.080.000.000.000.08
..................CTTAATCGGATTTTGAAGT................................................................................................................19260.040.040.000.000.00
...............TATCTTGATCGGATTTTAAAGT................................................................................................................22150.070.000.000.000.07
..........CAACTTATCTTAATCGTAT........................................................................................................................19250.040.000.040.000.00
................................AAAGTGGCAT--ACCTCTAAAT...............................................................................................20280.040.000.000.000.04
...............TATCTGAATCGGATTTTGAAGTGGC.............................................................................................................25230.040.000.040.000.00
.......................TCGGATTTTGAAGTGGCAT--ACCTCT...................................................................................................25280.040.040.000.000.00
...CATAACTCAACTTATCTTA...............................................................................................................................19270.040.000.000.000.04
..................................AGTGGCGT--ACCTATAAATGTT............................................................................................21290.030.030.000.000.00
..........CAACTTATCTTAATCTGAT........................................................................................................................19260.040.000.040.000.00
....................TAATCGGATTTTGAAGTGGCAT--ACCT.....................................................................................................26250.040.040.000.000.00
.................................AAGTGGCAT--ACCTCTAAATG..............................................................................................20380.030.000.000.000.03
..................CTTAATCGGATTTTGAATTGGC.............................................................................................................22260.040.040.000.000.00
...............................TGAAGTGGAAT--ACCTCTAAATGT.............................................................................................23340.030.000.000.000.03
...................TTAATCGGATTTTGAAGTxGCAT--A........................................................................................................23170.060.000.000.000.06
.......................TCGGAATTTGATGTGGCAT--ACCTCTA..................................................................................................26250.040.000.000.000.04
................ATATTATTCGGATTTTGAAGT................................................................................................................21190.050.000.000.000.05
GTCCATAACTCAACTTATCTTC...............................................................................................................................22150.070.070.000.000.00
...............TATCTTGATCGGATTTTGATGTGG..............................................................................................................24150.070.000.000.000.07
.....TAACTCAACTTATCTGTATCGGAT........................................................................................................................24120.080.000.000.000.08
..................CTGAATCGGATTTTGAAGTG...............................................................................................................20280.040.000.000.000.04
...............TATCTTAGTCGGATTTTGAAGTTGC.............................................................................................................2590.110.000.000.000.11
...............TATCTTAATCGGATTGTGAAGTGGC.............................................................................................................25210.050.000.050.000.00
.......................TCGGATTTTGATGTGGCAT--ACCTCT...................................................................................................25200.050.000.000.000.05
...............TATCTTAATCGGATTTTGAAGTG...............................................................................................................23210.050.050.000.000.00
..................CTTAATCGGATTTTGAAGTAGC.............................................................................................................22260.040.000.000.000.04
.................TCTGGATCGGATTTTGAAGTGGC.............................................................................................................23170.060.060.000.000.00
...............TATCTTAATCGGATTTTCAAGTGGC.............................................................................................................25210.050.000.000.000.05
................................GAAGTGGCAT--ACCTCTAAATG..............................................................................................21370.030.000.000.000.03
..............................TTGAAGTGGCAT--ACCTCTAAATGTT............................................................................................25340.030.000.000.000.03
..................CTTAATCGGATTTTGAAGTGG..............................................................................................................21260.040.000.000.000.04
........................................AT--ACCTCTAAATGTTTCTG-G......................................................................................20340.030.030.000.000.00
.................TCTTAATCGGATTTTGAAGTGTC.............................................................................................................23260.040.040.000.000.00
..................CTTAATCGGAATTTTAAGTGGC.............................................................................................................22140.070.000.000.000.07
.......ACTCAACTAATCTTAATCGG..........................................................................................................................20330.030.000.000.000.03
...........AACTAATCTTAATCGGAAT.......................................................................................................................19230.040.000.000.000.04
..............TTATCTGAATCGGATTTTGAAGTGGC.............................................................................................................26210.050.050.000.000.00
...............TATCTTAGTCGGATTTTGAAGTGGC.............................................................................................................25210.050.000.000.000.05
...........................................................................................................................A-------------------------20210.050.050.000.000.00
................ATTTTAATCGGACTTTGAAGTGG..............................................................................................................23200.050.000.000.000.05
..................CTGAATCGGATTTTGAAGT................................................................................................................19280.040.040.000.000.00
.......................TCGGATTTTGAAGTGGAAT--AC.......................................................................................................21330.030.000.000.000.03
................ATCTTAGTCGGATTTTGAAGTGGC.............................................................................................................24260.040.000.000.000.04
................................CAAGTGGCAT--ACCTCTAAAT...............................................................................................20400.030.000.000.000.03
...............TATCTGAATCGGATTTTGAAGTTGC.............................................................................................................25100.100.000.000.000.10
................ATCTTAATCGGATTTTGAAGTGGC.............................................................................................................24260.040.000.000.000.04
...............TATCTTAATCGGATTTTGAAGTTGC.............................................................................................................25210.050.000.000.000.05
658 scaffold_4748:80554-80700 + 49.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTA----AATATCTGTGTGTGAAATTATTTAAAAGATTA-----------ATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCAATTGTCGGGGGCAAGGTGCAATTATGAAAGTTGGTTGT-ATTCATAGAAATGTGGGACAATAGAAATATTTC----ATTAGTATCTACGTTATACCAGGTGGAAGTTTTAATGTTTATC-ATATTTTTGTAATTAAC--GTTGCCAATATA---
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........TCxGGGGTAAGGTGCAATTATGAAAGT...........................................................................................................................2620.500.000.000.000.50
...............................................................................................................TTAATGGTTATC-ATAGTTT...........................1920.500.500.000.000.00
1840 scaffold_4929:9976110-9976242 + 47.16
TCCGATGACCCATGGCGGGAGA-------------------------------GGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TAAAATGTCCCAAGGCTGAAGTTCTATACTCCATAACTCAACTAATTTTAATCGGATTTTGAAGTG--GCGTATATCTAAATGTTTCTG-GCGCAATTCTCTAAAAATCTGCATTCAAATTTAGAAATTTATTTTT--------------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..........................................................................................................ATCTGCATTCAAATTTGGAA................................................20170.180.060.000.000.12
..................................................................................GTTTCTG-GAGCAATTCTCTAAA.....................................................................22380.080.050.000.000.03
...........................................AATCTTAATCGGATTTTGAAGTG--GC........................................................................................................25160.190.060.000.000.13
.............................................................................TAAATGTTTCTG-GAGCAATTC...........................................................................21410.050.000.000.000.05
...............................................TTAATCGGATTTTGAAGTG--GC........................................................................................................21280.070.000.000.000.07
............................................................................CTAAATGTTTCTG-GAGCA...............................................................................18260.080.040.000.000.04
.........................................................................................................AATCTGCATTCAAATTTGGAA................................................21130.150.000.000.000.15
.......................CTATACTCCATAACTCAACTT..................................................................................................................................2130.330.000.000.000.33
...............................................................GTG--GCATATCTCTAAATGT..........................................................................................19410.020.020.000.000.00
..................................................................................GTTTCTG-GGGCAATTCTCTAAAAAACT................................................................27480.020.020.000.000.00
......GTCCCATAGCTGAAGTTCT.....................................................................................................................................................1940.250.000.000.000.25
............................................................................................................CTGCATTCAAATTTGGAAATTT............................................22470.020.020.000.000.00
..............................................................................................AATTCTCTAAAAATCTGCATTCAAAT......................................................26510.020.000.000.000.02
............................................................................CTAAATGTTGCTG-GAGCA...............................................................................18260.040.040.000.000.00
..............................................................................AAATGTTTCTG-GAGCAATTCTCTA.......................................................................24390.030.000.000.000.03
...AATGTCCCGAGGCTGAAGTT.......................................................................................................................................................2080.130.000.000.000.13
............................................ATCTTAATCGGATTTTGAAGTG--GC........................................................................................................24260.040.000.000.000.04
..............................................CTTAATCGGATTTTGAAGTG--G.........................................................................................................21260.040.000.000.000.04
...............................................................................AATGTTTCTG-GAGCAATTCTC.........................................................................21390.030.000.000.000.03
.......................CTAAACTCCATAACTCAACTT..................................................................................................................................21230.040.000.000.000.04
..............................................CTTAATCGGATTTTGAAGT.............................................................................................................19260.040.040.000.000.00
............................................................................CTAAATGTTTCTG-GCGCA...............................................................................18320.030.000.000.000.03
............................................ATCTTAGTCGGATTTTGAAGTG--GC........................................................................................................24260.040.000.000.000.04
...AATGACCCAAGACTGAAGT........................................................................................................................................................1980.130.130.000.000.00
..........................................................................CTCTAAATGTTTCTG-TCGCAATTCT..........................................................................25230.040.000.000.000.04
.................................................................................TGTTTCTG-GCGTAATTCTCTAAAA....................................................................24240.040.000.000.000.04
.............................................................................TAAATGTTTCTG-GAGCAATTCTC.........................................................................23380.030.030.000.000.00
.....................................................................................................................AATTTAGxAATTTATTTAT--------------------------------------18500.020.000.000.000.02
......................................................................................CTG-GCGCAATTCTCTAAGAACC.................................................................22190.050.000.000.000.05
..........................................................................................................ATCTGCATTGAAATTTAGAATTT.............................................23140.070.000.000.000.07
...........................................AATTTTAATCGGATTTTGAAGT.............................................................................................................2270.140.000.000.000.14
........................................................................................................AAATCTGCATTCAAATTTGGAA................................................22130.080.000.000.000.08
....ATGTCCCAAGGCTGAAGTTCTAAA..................................................................................................................................................24110.090.000.000.000.09
............................................ATATTATTCGGATTTTGAAGT.............................................................................................................21190.050.000.000.000.05
..............................................................................AAATGTTTCTC-GCGCAAC.............................................................................18240.040.040.000.000.00
..............................................................................................AATTCTCTAAAAAGCTGCATTCAAA.......................................................25410.020.000.000.000.02
...................................ACTCAACTAATCTTAATCGG.......................................................................................................................20330.030.000.000.000.03
..............................................CTGAATCGGATTTTGAAGT.............................................................................................................19280.040.040.000.000.00
...AATGTGCTAAGGCTGAAGT........................................................................................................................................................1980.130.130.000.000.00
.AAAATGTCCAAAGGCTGAAG.........................................................................................................................................................2090.110.000.000.000.11
.......................................AACTAATCTTAATCGGAAT....................................................................................................................19230.040.000.000.000.04
.....................................................................................................TAAAAATCTGCATTCAAATTTATAAAT..............................................27450.020.000.000.000.02
............................................ATTTTAATCGGACTTTGAAGTG--G.........................................................................................................23200.050.000.000.000.05
..............................................ATTAATCGGATTTTGAAGT.............................................................................................................19200.050.050.000.000.00
....................TTTCTAAACTCCATAACTC.......................................................................................................................................19220.050.050.000.000.00
..............................................CTTAATCGGATTTTGAATTG--GC........................................................................................................22260.040.040.000.000.00
.AAAGTGTCCCAAGACTGAAGTTCT.....................................................................................................................................................2440.250.000.000.000.25
..........................................................................................................ATCTGCATTCAAATTTAAAA................................................20240.040.000.000.000.04
............................................................................CTAAATGTTTCTG-GAGCAATT............................................................................21250.040.040.000.000.00
.....TGTCCCAAGGCTGAAGTTCTAAAGT................................................................................................................................................2580.130.000.000.000.13
................................................................................ATGTTTCTG-GAGCAATTCTC.........................................................................20390.030.030.000.000.00
...........................................AATCTTAATCGGATTTTGACGTG--GC........................................................................................................25180.060.000.000.000.06
...............................................................................AATGTTTCTG-GAGCCATTCTCTAAA.....................................................................25380.030.000.000.000.03
.....TGCACCAAGGCTGAAGTTC......................................................................................................................................................1960.170.170.000.000.00
...............................................................................................ATTCTCTAACAATCTGCGTT...........................................................20130.080.000.000.000.08
.............................................................................................................TGCATTCAAATTTGGAAATTTATTTT.......................................26430.020.000.000.000.02
.............................................TCTTAATCGGATTTTGAAGTG--TC........................................................................................................23260.040.040.000.000.00
............................................................................CAACATGTTTCTG-GCGCAA..............................................................................19140.070.000.000.000.07
..............................................CTTAATCGGATTTTGAAGTA--GC........................................................................................................22260.040.000.000.000.04
..............................................CTGAATCGGATTTTGAAGTG--..........................................................................................................20280.040.000.000.000.04
..................................................................................GTCTCTG-GCGCAATTCTCTAAAA....................................................................23510.020.000.000.000.02
...........................................................................................................TCTGCATTCAAATTTGGA.................................................18210.050.000.000.000.05
..........................................................................................................ATCTGCATTCAAATTTGGA.................................................19170.060.000.000.000.06
..AAATGTCTCAAAGCTGAA..........................................................................................................................................................1850.200.000.000.000.20
...ATTGACCCAAGGCTGAAGTTCT.....................................................................................................................................................2240.250.000.000.000.25
.......................................................ATTTTGAAGTG--GCGTACCT..................................................................................................19340.030.000.000.000.03
.....TGTCCCAAGGCTGAACTTCTAAA..................................................................................................................................................2360.170.000.170.000.00
.........................................................................................................AATCTGCGTTCAAATTTAGAA................................................21470.020.020.000.000.00
448 scaffold_4644:142821-142970 + 46.69
TCCGA-TGACCCATGGCGGGAGAGGATTATGAAAG---ACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAG-----------------------------------ATAT---T--TATTTTTACAT-TTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCCACTTGTCCATC------------TATAAATGGCCATCATTTGAAGCTC--------------------------AAATTAAGCTGACTCAGGAAATATGTGTTATTCGTATTTCAATGGTTCTTAATAATATTTTTTATATTTCCATATTTTACTCCTGTCATAAATCAGACGCGCACATAGGC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
1379 scaffold_4820:5441042-5441150 + 45.27
TCCGATGACCCA---TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCATAAACTCAACTTATCTTAATCGGATTTTGAAAGT-GGCATACCTCTAAATGTTTCTG-GCGAAATTCTCTAAAAAACTGCATTCAAATTTAGAAATTTATTTTTTCA-----------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.................................CAAGT-GGCATACCTCTAAAT............................................................................................20400.030.000.000.000.03
..............................................CTCTAAATGTTTCTG-TCGCAATTCT..........................................................................25230.040.000.000.000.04
..........CAACTTATCTTAGTCGGAT.....................................................................................................................19250.040.040.000.000.00
......AACTCAACTTATCTTAATCGGATTTTG.................................................................................................................27200.050.000.000.000.05
....................................GT-GGCATATCTCTAAATGT..........................................................................................19410.020.020.000.000.00
......AACTCAACTTATCTTAATCGG.......................................................................................................................21240.040.000.000.000.04
..................................................................AATTCTCTAAAAATCTGCATTCAAAT......................................................26510.020.000.000.000.02
..........................................ATACCTCTAAATGTTTCTG-G...................................................................................20340.030.030.000.000.00
..............TTATCTTAGTTGGATTTTGA................................................................................................................20110.090.000.090.000.00
..................................AAGT-GGCATACCTCTAAATG...........................................................................................20380.030.000.000.000.03
......................................................GTCTCTG-GCGCAATTCTCTAAAA....................................................................23510.020.000.000.000.02
..........CAACTTATCTTAATCGGAT.....................................................................................................................19250.040.040.000.000.00
.....................................................TGTTTCTG-GCGTAATTCTCTAAAA....................................................................24240.040.000.000.000.04
..................................................................AATTCTCTAAAAAGCTGCATTCAAA.......................................................25410.020.000.000.000.02
......AACTCAACTTATCTTATTCGGA......................................................................................................................22240.040.000.000.000.04
...........AACTTATCTTAATCGGAT.....................................................................................................................18250.040.000.000.000.04
................................................................................CTGCATTCAAATTTGGAAATTT............................................22470.020.020.000.000.00
...........AACTGATCGTAATCGGAT.....................................................................................................................18130.080.000.000.000.08
.........................................................................TAAAAATCTGCATTCAAATTTATAAAT..............................................27450.020.000.000.000.02
.................................GAAGT-GGCATACCTCTAAATG...........................................................................................21370.030.000.000.000.03
..........CAACTTATCTTAATCGTAT.....................................................................................................................19250.040.000.040.000.00
..............................................................................................................A-----------------------------------20210.050.050.000.000.00
................................................CTAAATGTTTCTG-GCGCA...............................................................................18320.030.000.000.000.03
.................................................................................TGCATTCAAATTTGGAAATTTATTTT.......................................26430.020.000.000.000.02
.......ACTCAACTAATCTTAATCGG.......................................................................................................................20330.030.000.000.000.03
...........AACTAATCTTAATCGGAAT....................................................................................................................19230.040.000.000.000.04
.................................AAAGT-GGCATACCTCTAAAT............................................................................................20280.040.000.000.000.04
......................................................GTTTCTG-GGGCAATTCTCTAAAAAACT................................................................27480.020.020.000.000.00
...................................AGT-GGCGTACCTATAAATGTT.........................................................................................21290.030.030.000.000.00
.........................................................................................AATTTAGxAATTTATTTAT......................................18500.020.000.000.000.02
.................................GAAGT-GGCATACCTCTAAATGT..........................................................................................22370.030.000.000.000.03
.............................................................................................................AA-----------------------------------2860.170.000.000.000.17
..........CAACTTATCTTAATCTGAT.....................................................................................................................19260.040.000.040.000.00
.............................................................................AATCTGCGTTCAAATTTAGAA................................................21470.020.020.000.000.00
1381 scaffold_4820:5780381-5780496 + 44.45
TCCGATGACCCA---TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAA-TTTCACG--CGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CTCCATAACTCAACTTATCTTAATCGGATTTTGATGT--GGCATACCTCTAAATGTTTCTG-GCGCAATTCTCTAAAAAACTGCATTTAAATTTAGAAATCATTTTTTTTTAAATTTTT------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
......................................................GTTTCTG-GAGCAATTCTCTAAA........................................................................22380.080.050.000.000.03
...............TATCTTAATCGGATTTTGAAGT--GG............................................................................................................24210.140.050.000.000.10
.................................................TAAATGTTTCTG-GAGCAATTC..............................................................................21410.050.000.000.000.05
................................................CTAAATGTTTCTG-GAGCA..................................................................................18260.080.040.000.000.04
...................TTAATCGGATTTTGAAGT--GGC...........................................................................................................21280.070.000.000.000.07
....................................................ATGTTTCTG-GAGCAATTCTC............................................................................20390.030.030.000.000.00
......................................................GTCTCTG-GCGCAATTCTCTAAAA.......................................................................23510.020.000.000.000.02
...............TATCTTAATCGGATTTTGAAGT--GGCA..........................................................................................................26210.050.000.000.000.05
...........................ATTTTGAAGT--GGCATACCT.....................................................................................................19320.030.000.000.000.03
........................................GCATACCTCTAAATGTTTCTG-GAGCA..................................................................................26190.050.000.000.000.05
...............TATCTTACTCGGATTTTGAAGT--GGC...........................................................................................................25210.050.000.000.000.05
..........CAACTTATCTTAGTCGGAT........................................................................................................................19250.040.040.000.000.00
......AACTCAACTTATCTTAATCGGATTTTG....................................................................................................................27200.050.000.000.000.05
................................GAAGT--GGCATACCTCTAAATGT.............................................................................................22370.030.000.000.000.03
......AACTCAACTTATCTTAATCGG..........................................................................................................................21240.040.000.000.000.04
...............AATCTTAATCGGATTTTGACGT--GGC...........................................................................................................25180.060.000.000.000.06
...............TATCTTAATCGGATTTTGAAGT--GGC...........................................................................................................25210.050.000.000.000.05
...............TCTCTTAATCGGATTTTTATGT--GGC...........................................................................................................2520.500.000.000.000.50
..............TTATCTTAGTTGGATTTTGA...................................................................................................................20110.090.000.090.000.00
................................................CTAAATGTTGCTG-GAGCA..................................................................................18260.040.040.000.000.00
...................................GT--GGCATATCTCTAAATGT.............................................................................................19410.020.020.000.000.00
...............TATCTTGATCGGATTTTGATGT--G.............................................................................................................23150.070.000.000.000.07
..........CAACTTATCTTAATCGGAT........................................................................................................................19250.040.040.000.000.00
......AACTCAACTTATCTTATTCGGA.........................................................................................................................22240.040.000.000.000.04
...........AACTTATCTTAATCGGAT........................................................................................................................18250.040.000.000.000.04
.....TAACTCAGCTTATCTTAATCGGAATT......................................................................................................................26110.090.090.000.000.00
...........................ATTTTGAAGT--GGCGTACCT.....................................................................................................19340.030.000.000.000.03
...........AACTGATCGTAATCGGAT........................................................................................................................18130.080.000.000.000.08
..................CTTAATCGGATTTTGAAGT--..............................................................................................................19260.040.040.000.000.00
..........CAACTTATCTTAATCGTAT........................................................................................................................19250.040.000.040.000.00
...............TATCTGAATCGGATTTTGAAGT--GGC...........................................................................................................25230.040.000.040.000.00
.......................TCGGATTTTGAAGT--GGCATACCTCT...................................................................................................25280.040.040.000.000.00
..................................................AAATGTTTCTC-GCGCAAC................................................................................18240.040.040.000.000.00
...CATAACTCAACTTATCTTA...............................................................................................................................19270.040.000.000.000.04
................................................CAACATGTTTCTG-GCGCAA.................................................................................19140.070.000.000.000.07
........................................................TTCTG-GAGCAATTCTCTAAAAAACTGC.................................................................27280.040.000.000.000.04
................................................CTAAATGTTTCTG-GAGCAATT...............................................................................21250.040.040.000.000.00
...................................................AATGTTTCTG-GAGCAATTCTC............................................................................21390.030.000.000.000.03
..........................................GTACCTCTAAATGTTTCTG-GAGCA..................................................................................24210.050.050.000.000.00
..........CAACTTATCTTAATCTGAT........................................................................................................................19260.040.000.040.000.00
....................TAATCGGATTTTGAAGT--GGCATACCT.....................................................................................................26250.040.040.000.000.00
.................................AAGT--GGCATACCTCTAAATG..............................................................................................20380.030.000.000.000.03
..................CTTAATCGGATTTTGAATT--GGC...........................................................................................................22260.040.040.000.000.00
...............................TGAAGT--GGAATACCTCTAAATGT.............................................................................................23340.030.000.000.000.03
..............................................................................AACTGCATTTAAATTTGGAA...................................................2050.200.000.000.000.20
......................................................GTTTCTG-GGGCAATTCTCTAAAAAACT...................................................................27480.020.020.000.000.00
.......................TCGGAATTTGATGT--GGCATACCTCTA..................................................................................................26250.040.000.000.000.04
..............................................CTCTAAATGTTTCTG-TCGCAATTCT.............................................................................25230.040.000.000.000.04
................................................CTAAATGTTTCTG-GCGCA..................................................................................18320.030.000.000.000.03
GTCCATAACTCAACTTATCTTC...............................................................................................................................22150.070.070.000.000.00
...............TATCTTGATCGGATTTTGATGT--GG............................................................................................................24150.070.000.000.000.07
.....TAACTCAACTTATCTGTATCGGAT........................................................................................................................24120.080.000.000.000.08
...................................................AATGTTTCTG-GAGCCATTCTCTAAA........................................................................25380.030.000.000.000.03
.................................................TAAATGTTTCTG-GAGCAATTCTC............................................................................23380.030.030.000.000.00
..................CTGAATCGGATTTTGAAGT--G.............................................................................................................20280.040.000.000.000.04
...............TATCTTAATCGGATTGTGAAGT--GGC...........................................................................................................25210.050.000.050.000.00
.......................TCGGATTTTGATGT--GGCATACCTCT...................................................................................................25200.050.000.000.000.05
...............TATCTTAATCGGATTTTGAAGT--G.............................................................................................................23210.050.050.000.000.00
..................CTTAATCGGATTTTGAAGT--AGC...........................................................................................................22260.040.000.000.000.04
..................................................AAATGTTTCTG-GAGCAATTCTCTA..........................................................................24390.030.000.000.000.03
...............TATCTTAATCGGATTTTCAAGT--GGC...........................................................................................................25210.050.000.000.000.05
................................GAAGT--GGCATACCTCTAAATG..............................................................................................21370.030.000.000.000.03
..............................TTGAAGT--GGCATACCTCTAAATGTT............................................................................................25340.030.000.000.000.03
..................CTTAATCGGATTTTGAAGT--GG............................................................................................................21260.040.000.000.000.04
..........................................................CTG-GCGCAATTCTCTAAGAACC....................................................................22190.050.000.000.000.05
..........................................ATACCTCTAAATGTTTCTG-G......................................................................................20340.030.030.000.000.00
.................TCTTAATCGGATTTTGAAGT--GTC...........................................................................................................23260.040.040.000.000.00
.......ACTCAACTAATCTTAATCGG..........................................................................................................................20330.030.000.000.000.03
...........AACTAATCTTAATCGGAAT.......................................................................................................................19230.040.000.000.000.04
..............TTATCTGAATCGGATTTTGAAGT--GGC...........................................................................................................26210.050.050.000.000.00
.....................................................TGTTTCTG-GCGTAATTCTCTAAAA.......................................................................24240.040.000.000.000.04
...............TATCTTAGTCGGATTTTGAAGT--GGC...........................................................................................................25210.050.000.000.000.05
..................CTGAATCGGATTTTGAAGT--..............................................................................................................19280.040.040.000.000.00
.......................TCGGATTTTGAAGT--GGAATAC.......................................................................................................21330.030.000.000.000.03
................ATCTTAGTCGGATTTTGAAGT--GGC...........................................................................................................24260.040.000.000.000.04
................................CAAGT--GGCATACCTCTAAAT...............................................................................................20400.030.000.000.000.03
................ATCTTAATCGGATTTTGAAGT--GGC...........................................................................................................24260.040.000.000.000.04
...............TATCTTAATCGGATTTTGAAGT--TGC...........................................................................................................25210.050.000.000.000.05
1795 scaffold_4929:1522671-1522775 + 43.72
TCCGATGACCC---ATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CTCCATAACTCAACATATCTTAATCGGATTTTGAAGTG--GCATACCTCTAAATGTTTCTG-GCGCAATTATCTAAAAAACTGCATTCAAATTTAGAAATTTATTTTT--------------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...............AATCTTAATCGGATTTTGAAGTG--GC........................................................................................................25160.190.060.000.000.13
...............TATCTTAATCGGATTTTGAAGTG--G.........................................................................................................24210.140.050.000.000.10
................................................CTAAATGTTTCTG-GAGCA...............................................................................18260.080.040.000.000.04
...................TTAATCGGATTTTGAAGTG--GC........................................................................................................21280.070.000.000.000.07
......................................................GTCTCTG-GCGCAATTCTCTAAAA....................................................................23510.020.000.000.000.02
...............TATCTTAATCGGATTTTGAAGTG--GCA.......................................................................................................26210.050.000.000.000.05
...........................ATTTTGAAGTG--GCATACCT..................................................................................................19320.030.000.000.000.03
........................................GCATACCTCTAAATGTTTCTG-GAGCA...............................................................................26190.050.000.000.000.05
...............TATCTTACTCGGATTTTGAAGTG--GC........................................................................................................25210.050.000.000.000.05
..........CAACTTATCTTAGTCGGAT.....................................................................................................................19250.040.040.000.000.00
...............TATCTTAATCGTATTTTGGAGTG--GC........................................................................................................2590.110.000.000.000.11
......AACTCAACTTATCTTAATCGGATTTTG.................................................................................................................27200.050.000.000.000.05
................................GAAGTG--GCATACCTCTAAATGT..........................................................................................22370.030.000.000.000.03
......AACTCAACTTATCTTAATCGG.......................................................................................................................21240.040.000.000.000.04
...............AATCTTAATCGGATTTTGACGTG--GC........................................................................................................25180.060.000.000.000.06
...............TATCTTAATCGGATTTTGAAGTG--GC........................................................................................................25210.050.000.000.000.05
..................ATTAATCGGATTTTGAAGT.............................................................................................................19200.050.050.000.000.00
................................................CTAAATGTTGCTG-GAGCA...............................................................................18260.040.040.000.000.00
...................................GTG--GCATATCTCTAAATGT..........................................................................................19410.020.020.000.000.00
.........................................................................TAAAAATCTGCATTCAAATTTATAAAT..............................................27450.020.000.000.000.02
...........................ATTTTAAAGTG--GAATACCT..................................................................................................19260.040.000.000.000.04
...............TATCTTGATCGGATTTTGATGTG--..........................................................................................................23150.070.000.000.000.07
..........................GATTTTGAAGCG--GAATACCTCTAAAT............................................................................................26190.050.000.000.000.05
..........CAACTTATCTTAATCGGAT.....................................................................................................................19250.040.040.000.000.00
......AACTCAACTTATCTTATTCGGA......................................................................................................................22240.040.000.000.000.04
...........AACTTATCTTAATCGGAT.....................................................................................................................18250.040.000.000.000.04
.............................................................................AATCTGCGTTCAAATTTAGAA................................................21470.020.020.000.000.00
...........................ATTTTGAAGTG--GCGTACCT..................................................................................................19340.030.000.000.000.03
.........................................................................................AATTTAGxAATTTATTTAT--------------------------------------18500.020.000.000.000.02
..................CTTAATCGGATTTTGAAGT.............................................................................................................19260.040.040.000.000.00
...............TATCTTGATCGGATTTTAAAGT.............................................................................................................22150.070.000.000.000.07
..........CAACTTATCTTAATCGTAT.....................................................................................................................19250.040.000.040.000.00
................................AAAGTG--GCATACCTCTAAAT............................................................................................20280.040.000.000.000.04
.......................TCGGATTTTGAAGTG--GCATACCTCT................................................................................................25280.040.040.000.000.00
...............TATCTGAATCGGATTTTGAAGTG--GC........................................................................................................25230.040.000.040.000.00
..................................................AAATGTTTCTC-GCGCAAC.............................................................................18240.040.040.000.000.00
...CATAACTCAACTTATCTTA............................................................................................................................19270.040.000.000.000.04
.................................................................................TGCATTCAAATTTGGAAATTTATTTT.......................................26430.020.000.000.000.02
..................................AGTG--GCGTACCTATAAATGTT.........................................................................................21290.030.030.000.000.00
................................................CAACATGTTTCTG-GCGCAA..............................................................................19140.070.000.000.000.07
................................................CTAAATGTTTCTG-GAGCAATT............................................................................21250.040.040.000.000.00
..........................................GTACCTCTAAATGTTTCTG-GAGCA...............................................................................24210.050.050.000.000.00
..........CAACTTATCTTAATCTGAT.....................................................................................................................19260.040.000.040.000.00
....................TAATCGGATTTTGAAGTG--GCATACCT..................................................................................................26250.040.040.000.000.00
.................................AAGTG--GCATACCTCTAAATG...........................................................................................20380.030.000.000.000.03
..................CTTAATCGGATTTTGAATTG--GC........................................................................................................22260.040.040.000.000.00
...................TTAATCGGATTTTGAAGTx--GCATA.....................................................................................................23170.060.000.000.000.06
...............................TGAAGTG--GAATACCTCTAAATGT..........................................................................................23340.030.000.000.000.03
......................................................GTTTCTG-GGGCAATTCTCTAAAAAACT................................................................27480.020.020.000.000.00
.......................TCGGAATTTGATGTG--GCATACCTCTA...............................................................................................26250.040.000.000.000.04
................ATATTATTCGGATTTTGAAGT.............................................................................................................21190.050.000.000.000.05
..............................................CTCTAAATGTTTCTG-TCGCAATTCT..........................................................................25230.040.000.000.000.04
................................................CTAAATGTTTCTG-GCGCA...............................................................................18320.030.000.000.000.03
...............TATCTTGATCGGATTTTGATGTG--G.........................................................................................................24150.070.000.000.000.07
..................CTGAATCGGATTTTGAAGTG--..........................................................................................................20280.040.000.000.000.04
...............TATCTTAGTCGGATTTTGAAGTT--GC........................................................................................................2590.110.000.000.000.11
...............TATCTTAATCGGATTGTGAAGTG--GC........................................................................................................25210.050.000.050.000.00
.......................TCGGATTTTGATGTG--GCATACCTCT................................................................................................25200.050.000.000.000.05
...............TATCTTAATCGGATTTTGAAGTG--..........................................................................................................23210.050.050.000.000.00
..................CTTAATCGGATTTTGAAGTA--GC........................................................................................................22260.040.000.000.000.04
.................TCTGGATCGGATTTTGAAGTG--GC........................................................................................................23170.060.060.000.000.00
...............TATCTTAATCGGATTTTCAAGTG--GC........................................................................................................25210.050.000.000.000.05
................................GAAGTG--GCATACCTCTAAATG...........................................................................................21370.030.000.000.000.03
..............................TTGAAGTG--GCATACCTCTAAATGTT.........................................................................................25340.030.000.000.000.03
..................CTTAATCGGATTTTGAAGTG--G.........................................................................................................21260.040.000.000.000.04
..........................................ATACCTCTAAATGTTTCTG-G...................................................................................20340.030.030.000.000.00
.................TCTTAATCGGATTTTGAAGTG--TC........................................................................................................23260.040.040.000.000.00
..................CTTAATCGGAATTTTAAGTG--GC........................................................................................................22140.070.000.000.000.07
.......ACTCAACTAATCTTAATCGG.......................................................................................................................20330.030.000.000.000.03
..............TTATCTGAATCGGATTTTGAAGTG--GC........................................................................................................26210.050.050.000.000.00
...............TATCTTAGTCGGATTTTGAAGTG--GC........................................................................................................25210.050.000.000.000.05
................ATTTTAATCGGACTTTGAAGTG--G.........................................................................................................23200.050.000.000.000.05
..................CTGAATCGGATTTTGAAGT.............................................................................................................19280.040.040.000.000.00
.......................TCGGATTTTGAAGTG--GAATAC....................................................................................................21330.030.000.000.000.03
................ATCTTAGTCGGATTTTGAAGTG--GC........................................................................................................24260.040.000.000.000.04
................................CAAGTG--GCATACCTCTAAAT............................................................................................20400.030.000.000.000.03
...............TATCTGAATCGGATTTTGAAGTT--GC........................................................................................................25100.100.000.000.000.10
................ATCTTAATCGGATTTTGAAGTG--GC........................................................................................................24260.040.000.000.000.04
................................................................................CTGCATTCAAATTTGGAAATTT............................................22470.020.020.000.000.00
...............TATCTTAATCGGATTTTGAAGTT--GC........................................................................................................25210.050.000.000.000.05
2405 scaffold_3066:11642-11788 - 43.45
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTG--------------TGAAATTATTTAAAAGATT----AATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATA---------CAT
TCCGAA-------------------GTATGACAGGCTATTCTAAATTAAATAAATATGTAGACCTTTCAGCCAACAATCTTATTCAACAAATACAAAAATTCTA----TATCCATTCATTTTCACCTTTCACCTTACATTCTATTAGGAAGAAAAATACTAATGGAAAAT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
142 scaffold_3066:39208-39354 + 43.45
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTG--------------TGAAATTATTTAAAAGATT----AATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATA---------CAT
TCCGAA-------------------GTATGACAGGCTATTCTAAATTAAATAAATATGTAGACCTTTCAGCCAACAATCTTATTCAACAAATACAAAAATTCTA----TATCCATTCATTTTCACCTTTCACCTTACATTCTATTAGGAAGAAAAATACTAATGGAAAAT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2289 scaffold_4929:26490038-26490155 + 43.44
TCCGATGACC-CATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAA---------------------------------------TTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACGGTGTGTGTGTGGT-----------------------------------GTGTGTGTGTGGGTATGGGTAACAAAGTGTTATACTATGGTACATATGCTACTATGTATATATTTTTAATTACACGTGA-------TATTTTTTCATTATTTTTTATA-----------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...TGTGTGTGTGTGTT-----------------------------------GTGTG..............................................................................................................................1952.000.000.400.001.60
...................................................................................................GCTAGTATGGATATATTTT.................................................................1960.500.000.000.000.50
.......TGTGTGTGGT-----------------------------------GTGTATCTGTG........................................................................................................................2150.400.000.000.000.40
...................................................................................................GCTAGTATGGATATATTTTT................................................................2060.330.000.000.000.33
.........................................................................................................ATTTATGTATTTTTAATT............................................................18130.150.080.000.000.08
....GTGTGTGTGTGGG-----------------------------------ATGTG..............................................................................................................................1850.400.000.000.000.40
...TGTGTGTGTGTGTT-----------------------------------GTGT...............................................................................................................................1860.330.000.170.000.17
...................................................................................................GCTACTATGGAGATATTTTT................................................................2060.330.170.000.000.17
...................................................................................................GCTATTATGTATATATTTTTT...............................................................2160.170.170.000.000.00
................A-----------------------------------GTGTGTGTGTGCGTATG..................................................................................................................18100.100.000.000.000.10
......GCATGTGTGGT-----------------------------------GTGTGTG............................................................................................................................1850.200.000.000.000.20
....GTGTGGGTGTGGT-----------------------------------GTGGGT.............................................................................................................................1960.170.000.000.000.17
.....TGCATGTGTGGT-----------------------------------GTGTGTG............................................................................................................................1950.200.000.000.000.20
......GTGTGTCTCGT-----------------------------------GTGTGTGTGT.........................................................................................................................2140.250.000.000.000.25
....ATGTGTGxCTGGT-----------------------------------GTGTGTG............................................................................................................................1940.250.000.000.000.25
.....TGTGTGTGTGGT-----------------------------------GTGTGTT............................................................................................................................1950.200.000.000.000.20
...........TGTGGT-----------------------------------GTGTGTGTGTTGT......................................................................................................................1920.500.000.000.000.50
....................................................GTGTGTGTGTGCGTATGT.................................................................................................................18140.070.070.000.000.00
....................................................GTGTGTGTGTGCGTATGTGT...............................................................................................................20100.100.000.000.000.10
...............................................................................................................................................................A-----------------------2050.200.000.000.000.20
.........................................................................................................ATTTATATATTTTTGATT............................................................18160.060.060.000.000.00
....................................................GTGTGGGTGTGGGTATGGG................................................................................................................1960.170.000.000.000.17
....ATGTGTGTGTGGT-----------------------------------GTCTGTGT...........................................................................................................................2140.250.000.000.000.25
...........TGTGGT-----------------------------------GTGAGTGTGTGGTT.....................................................................................................................2020.500.000.000.000.50
...................................................................................................GCTACTATGGAGATATTTT.................................................................1960.170.000.000.000.17
.............TGGT-----------------------------------GTGTGTGTGTGTGA.....................................................................................................................1870.140.000.140.000.00
....GTGTGTGTGTGGT-----------------------------------ATGCGT.............................................................................................................................1950.200.200.000.000.00
...TGTGTGTGTGTGTT-----------------------------------GTGTGT.............................................................................................................................2050.200.000.000.000.20
............TTGGT-----------------------------------GTGTGTGTGTGTG......................................................................................................................18160.060.000.000.000.06
.........................................................................................................ATGTATGTATTTTTGATT............................................................1890.110.110.000.000.00
....GTGTxTGTGTGGT-----------------------------------GTGTTTG............................................................................................................................1950.200.000.000.000.20
...............GT-----------------------------------GTGTGTGTATGTGTATG..................................................................................................................19100.100.000.000.000.10
.....TGAGTGTGTAGT-----------------------------------GTGTGTGTG..........................................................................................................................2140.250.250.000.000.00
...............GT-----------------------------------GTGTGTGTGTGTGTTTGGGT...............................................................................................................2260.170.000.000.000.17
................T-----------------------------------GTGTGTGTGxGGATGTGG.................................................................................................................18110.090.000.000.000.09
.......TGTGTGTGGT-----------------------------------GTGTATCT...........................................................................................................................1850.200.000.000.000.20
................T-----------------------------------GTGTGTGTGTGCGGATGG.................................................................................................................1960.170.000.000.000.17
....................................................GTGGGTGTGTGGGTGTGGGT...............................................................................................................20100.100.100.000.000.00
...................................................................................................GCTAGTATGTAGATATTTTT................................................................2060.170.000.170.000.00
......ATGTGTGTGCT-----------------------------------GTGTGTG............................................................................................................................1840.250.000.000.000.25
3588 scaffold_4845:2189741-2189920 - 43.28
TCCGATGACCCATGGCGGGAGAGGATTATGA---------------------AAGACAATTTGAAATTAAATATCTG-------------------------TGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACTCAAATCGGCAGAGGATGAGGAATATAGCGAGGAGCATGATTAAATGCAAATGCATGATTAATTTCTTAATGTGTGCCTTAAATAAAAGACTGTGAG--------CTTAAAATTCTTTTGGCAGGGTAAGTTATTTATTTATACAATTGTCCTTGTAGAAACCGGGGTCCCAACATAGA-
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........CTCAAAxCGGCAGAGCATGA.................................................................................................................................................................1920.500.500.000.000.00
441 scaffold_4602:8294-8415 + 42.94
TCCGATGACC-CATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAA---------------------------------------TTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACTGTGTGTGTGTGGTGT-------------------------------GTGTGTGTGTGTGGGTATGGGTAACAAAGTGTTATACTATGGTACATATGCTACTATGTATATATTTTTAATTACACGTGA-------TATTTTTTCATTATTTTTTATA-----------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..............TGTGT-------------------------------GTGTGTGTGTGTGTGT.....................................................................................................................21430.300.000.000.000.30
................TGT-------------------------------GTGTGTGTGTGTGTGTGT...................................................................................................................21430.300.000.000.000.30
...TGTGTGTGTGTGTTGT-------------------------------GTG..................................................................................................................................1952.000.000.400.001.60
...TGTGTGTGTGTGTTGT-------------------------------GTGC.................................................................................................................................2031.670.000.000.001.67
.................GT-------------------------------GGGTGTGTGGGTGGGT.....................................................................................................................1841.250.000.000.001.25
............GTGGTGC-------------------------------GTGTGTGTGTGTGTG......................................................................................................................2240.750.000.000.000.75
..............TGTGT-------------------------------GTGTGTGTGTGTG........................................................................................................................18360.080.000.000.000.08
...................................................................................................GCTAGTATGGATATATTTT.................................................................1960.500.000.000.000.50
................TGT-------------------------------GTGTGTGTGTGTGTG......................................................................................................................18360.080.000.000.000.08
...............GTGC-------------------------------GTGTGTGTGTGTGT.......................................................................................................................18400.050.050.000.000.00
...................................................................................................GCTACTATGGAGATATTTTT................................................................2060.330.170.000.000.17
.......TGTGTGTGGTGT-------------------------------GTATCTGTG............................................................................................................................2150.400.000.000.000.40
...................................................................................................GCTAGTATGGATATATTTTT................................................................2060.330.000.000.000.33
.........................................................................................................ATTTATGTATTTTTAATT............................................................18130.150.080.000.000.08
...........TATCGTGT-------------------------------GTGTGTGTGT...........................................................................................................................1860.330.170.000.000.17
.................GT-------------------------------CTGTGTGTGTGTGAGT.....................................................................................................................18110.180.090.000.000.09
....GTGTGTGTGTGGGAT-------------------------------GTG..................................................................................................................................1850.400.000.000.000.40
...TGTGTGTGTGTGTTGT-------------------------------GT...................................................................................................................................1860.330.000.170.000.17
.............TCGAGT-------------------------------GTGTGTGTGTGT.........................................................................................................................1870.290.140.000.000.14
.................GT-------------------------------GCGTGTGTGTGTGTGT.....................................................................................................................18400.050.050.000.000.00
.............GAGTGT-------------------------------GTGTGTGTGTGT.........................................................................................................................18460.020.020.000.000.00
.....TGCATGTGTGGTGT-------------------------------GTGTG................................................................................................................................1950.200.000.000.000.20
TACTGTGTGTGTGGTGTGT-------------------------------.....................................................................................................................................1930.330.000.000.000.33
......GTGTGTCTCGTGT-------------------------------GTGTGTGT.............................................................................................................................2140.250.000.000.000.25
...............GTGT-------------------------------GTGCGTGTGTGTGA.......................................................................................................................18140.070.070.000.000.00
...............GTAC-------------------------------GTGTGTGTGTGTGG.......................................................................................................................1870.140.140.000.000.00
............GGGCTGT-------------------------------GTGTGTGTGTGT.........................................................................................................................1940.250.000.000.000.25
.........................................................................................................ATGTATGTATTTTTGATT............................................................1890.110.110.000.000.00
.........................................................................................................ATTTATATATTTTTGATT............................................................18160.060.060.000.000.00
...................................................................................................GCTATTATGTATATATTTTTT...............................................................2160.170.170.000.000.00
...............GAGT-------------------------------GTGTGTGTGTGTGT.......................................................................................................................18460.020.020.000.000.00
...................................................TGTGTGTGTGTGCGGATGG.................................................................................................................1960.170.000.000.000.17
...................................................TGTGTGTGTGxGGATGTGG.................................................................................................................18110.090.000.000.000.09
...................................................................................................GCTAGTATGTAGATATTTTT................................................................2060.170.000.170.000.00
...............GTTT-------------------------------GTGTTTGTGTGTGG.......................................................................................................................1880.130.000.130.000.00
..............CGTGT-------------------------------GTGTGTGTATGTG........................................................................................................................1880.130.000.000.000.13
...........TGTGGTTT-------------------------------ATGTGTGTGT...........................................................................................................................1840.250.000.000.000.25
.................GT-------------------------------GTGTGTATxAGTGGGTA....................................................................................................................1860.170.000.170.000.00
......GAGTGTGxCGTGT-------------------------------GTGTGTGTGTGT.........................................................................................................................2420.500.000.000.000.50
................TGT-------------------------------GTGTGTGTGTGTGGT......................................................................................................................18150.070.000.000.000.07
..................................................GTGTGTGTGTATGTGTATG..................................................................................................................19100.100.000.000.000.10
...............GTGT-------------------------------GCATGTGTGTGTGG.......................................................................................................................1860.170.170.000.000.00
................TGT-------------------------------GTGGGTGTGTGTGTG......................................................................................................................18420.020.000.000.000.02
..............GTTGT-------------------------------GCGTGTGTGTGTG........................................................................................................................18110.090.000.000.000.09
.................GA-------------------------------GTGTGTGTGTGTGTGT.....................................................................................................................18460.020.020.000.000.00
............GTGGTGC-------------------------------GTGTGTGTGTGTGTGT.....................................................................................................................2340.250.000.000.000.25
.............TGGTGT-------------------------------GCGTGTATGTGTGG.......................................................................................................................2040.250.000.000.000.25
....GTGTxTGTGTGGTGT-------------------------------GTTTG................................................................................................................................1950.200.000.000.000.20
.....TGAGTGTGTAGTGT-------------------------------GTGTGTG..............................................................................................................................2140.250.250.000.000.00
............GTGGTGT-------------------------------GTGGGTGGGTGT.........................................................................................................................1940.250.000.000.000.25
......ATGTGTGTGCTGT-------------------------------GTGTG................................................................................................................................1840.250.000.000.000.25
..................................................GTGTGTGTGTGTGTGTTTGGGT...............................................................................................................2260.170.000.000.000.17
...................................................AGTGTGTGTGTGCGTATG..................................................................................................................18100.100.000.000.000.10
...............GTGT-------------------------------GTGAGTGTGTGTGTGT.....................................................................................................................20250.040.000.000.000.04
..............TGTGT-------------------------------GGGTGTGTGTGTG........................................................................................................................18420.020.000.000.000.02
.................GT-------------------------------GAGTGTGTGTGTGCGT.....................................................................................................................1880.130.000.000.000.13
............GTGGTGT-------------------------------GCGTGCGTGTGT.........................................................................................................................1940.250.000.250.000.00
......GCATGTGTGGTGT-------------------------------GTGTG................................................................................................................................1850.200.000.000.000.20
.....TGTGTGTGxAGTGT-------------------------------GTGTGTGAGTGT.........................................................................................................................2540.250.000.000.000.25
....................................................GTGTGTGTGTGCGTATGT.................................................................................................................18140.070.070.000.000.00
....GTGTGGGTGTGGTGT-------------------------------GGGT.................................................................................................................................1960.170.000.000.000.17
....................................................GTGGGTGTGTGGGTGTGGGT...............................................................................................................20100.100.100.000.000.00
...............GTGG-------------------------------GTGTGTGGGTGTGGGT.....................................................................................................................20100.100.100.000.000.00
...............GTGT-------------------------------GTGTGTGTGTGTAGGT.....................................................................................................................20100.100.000.000.000.10
....ATGTGTGxCTGGTGT-------------------------------GTGTG................................................................................................................................1940.250.000.000.000.25
....................................................GTGTGTGTGTGCGTATGTGT...............................................................................................................20100.100.000.000.000.10
.....TGTGTGTGTGGTGT-------------------------------GTGTT................................................................................................................................1950.200.000.000.000.20
................TGT-------------------------------GTGTGTGTGTGTGCGA.....................................................................................................................1970.140.000.000.000.14
...................................................................................................GCTACTATGGAGATATTTT.................................................................1960.170.000.000.000.17
...TGTGTGTGTGTGCTGT-------------------------------GTGC.................................................................................................................................2030.330.000.000.000.33
...............GTGT-------------------------------TTGTGTGTGTGTGGT......................................................................................................................1970.140.000.140.000.00
................TGT-------------------------------GTGTGTGTGTGTGTGTGTG..................................................................................................................22320.030.000.000.000.03
................TGT-------------------------------GTGTGTGTGTGTGGGTT....................................................................................................................2080.130.000.000.000.13
....ATGTGTGTGTGGTGT-------------------------------CTGTGT...............................................................................................................................2140.250.000.000.000.25
.................GT-------------------------------GTGTGTGTGTGTGTGTTTGGGT...............................................................................................................2440.250.000.000.000.25
.............TGGTGT-------------------------------GTGTGTGTGTGA.........................................................................................................................1870.140.000.140.000.00
....GTGTGTGTGTGGTAT-------------------------------GCGT.................................................................................................................................1950.200.200.000.000.00
...TGTGTGTGTGTGTTGT-------------------------------GTGT.................................................................................................................................2050.200.000.000.000.20
............TTGGTGT-------------------------------GTGTGTGTGTG..........................................................................................................................18160.060.000.000.000.06
...............GTGT-------------------------------GTGTGTGTGTGTGTGTGTG..................................................................................................................23240.040.000.040.000.00
....................................................GTGTGGGTGTGGGTATGGG................................................................................................................1960.170.000.000.000.17
................TTT-------------------------------GTGTGTATGTGTGGGT.....................................................................................................................1950.200.200.000.000.00
...........ATTGGTGT-------------------------------GTGTGTGTGT...........................................................................................................................1860.170.000.000.000.17
.......TGTGTGTGGTGT-------------------------------GTATCT...............................................................................................................................1850.200.000.000.000.20
...........TGTGCTGT-------------------------------ATGTGTGTGTG..........................................................................................................................1940.250.000.000.000.25
............GTTGTGC-------------------------------GTGTGTGTGTG..........................................................................................................................18110.090.000.000.000.09
..............TGTGT-------------------------------GTGCGTGTGTGTG........................................................................................................................18500.020.000.000.000.02
...TGTGTGTGTATGTTGT-------------------------------GTG..................................................................................................................................1930.330.000.000.000.33
...............ATGT-------------------------------GTGTGTGTGTGTGGT......................................................................................................................1950.200.000.000.000.20
................TGT-------------------------------GTGTGCGTGTGTGTG......................................................................................................................18500.020.000.000.000.02
389 scaffold_4512:1003613-1003731 + 42.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGT----GAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATTTGCAAGCCGCCAAACGAAAATATTATAAGAAACA--TGAAAAACGTATGTCTCTGGAAGAAGAAAGACATTGTAAAGATGAACTCCA------GGTATTAATTTAAACAATTTTTACAAAAGTA--------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.....................................................CGCTGGAAGAAGAAAGAGA...........................................................................1930.670.000.000.000.67
.................................AACA--TGAAAAACGTATGTCGCTGGAA......................................................................................2620.500.000.000.000.50
................................................TATGTCTCTGGAAGAAGAAAGAC............................................................................2320.500.000.000.000.50
490 scaffold_4690:10040326-10040490 + 41.7
TCCGATGACCCATGGCGGGA------------------------GAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTG-TCCCTATAATAACCGGGGTGCCAACATACAT
TCCGAATGCTGAAGTTCTGAAGTCCATAACTCAACTAATATTAATCGGATTTTGAAGTGGCA--TACCTTTAAATGTTTCTG-GAGCAATTCTCTAAAAATCTGCATTCAAATTTAGAAATTTATTTTTTTTTTCATTTTTTGTAATTTTTTTGATGCAGAAATCCAA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
....................................AATCTTAATCGGATTTTGAAGTGGC...........................................................................................................25160.190.060.000.000.13
...................................................................................................ATCTGCATTCAAATTTGGAA.................................................20170.180.060.000.000.12
...........................................................................GTTTCTG-GAGCAATTCTCTAAA......................................................................22380.080.050.000.000.03
......................................................................TAAATGTTTCTG-GAGCAATTC............................................................................21410.050.000.000.000.05
........................................TTAATCGGATTTTGAAGTGGC...........................................................................................................21280.070.000.000.000.07
.....................................................................CTAAATGTTTCTG-GAGCA................................................................................18260.080.040.000.000.04
..................................................................................................AATCTGCATTCAAATTTGGAA.................................................21130.150.000.000.000.15
.....................................................................................................CTGCATTCAAATTTGGAAATTT.............................................22470.020.020.000.000.00
....................................AATTTTAATCGGATTTTGAAGT..............................................................................................................2270.140.000.000.000.14
.......................................................................................AATTCTCTAAAAATCTGCATTCAAAT.......................................................26510.020.000.000.000.02
......................................................AAGTGGCA--TACCTCTAAATG............................................................................................20380.030.000.000.000.03
.........TGAAGTTCTAAAGTCCATAACTGAAC.....................................................................................................................................26110.090.000.000.000.09
......................................................................TAAATGTTTCTG-GAGCAATTCTC..........................................................................23380.030.030.000.000.00
..................................................................................................AATCTGCGTTCAAATTTAGAA.................................................21470.020.020.000.000.00
.............................................................A--TACCTTTAAATGTTTCTG-GA...................................................................................21120.080.000.000.000.08
.....................................ATATTATTCGGATTTTGAAGT..............................................................................................................21190.050.000.000.000.05
.......................................CTGAATCGGATTTTGAAGT..............................................................................................................19280.040.040.000.000.00
.....................................................CAAGTGGCA--TACCTCTAAAT.............................................................................................20400.030.000.000.000.03
....................................................................................................TCTGCATTCAAATTTGGA..................................................18210.050.000.000.000.05
.......................................ATTAATCGGATTTTGAAGT..............................................................................................................19200.050.050.000.000.00
.........................................................................ATGTTTCTG-GAGCAATTCTC..........................................................................20390.030.030.000.000.00
......................................TCTTAATCGGATTTTGAAGTGTC...........................................................................................................23260.040.040.000.000.00
......................................................................................................TGCATTCAAATTTGGAAATTTATTTT........................................26430.020.000.000.000.02
..............................................................................................TAAAAATCTGCATTCAAATTTATAAAT...............................................27450.020.000.000.000.02
.................................................................................................AAATCTGCATTCAAATTTGGAA.................................................22130.080.000.000.000.08
.......................................CTTAATCGGATTTTGAAGTAGC...........................................................................................................22260.040.000.000.000.04
....................................AATCTTAATCGGATTTTGACGTGGC...........................................................................................................25180.060.000.000.000.06
........................................................GTGGCA--TATCTCTAAATGT...........................................................................................19410.020.020.000.000.00
..........................................................................................................TTCAAATTTGCAAATTTATTTTTTT.....................................25100.100.000.000.000.10
.............................................................................TTCTG-GAGCAATTCTCTAAAAAACTGC...............................................................27280.040.000.000.000.04
................................................ATTTTGAAGTGGCG--TACCT...................................................................................................19340.030.000.000.000.03
................................AACTAATCTTAATCGGAAT.....................................................................................................................19230.040.000.000.000.04
..........................................................................................................................................TGTTGTAATTTTTTTGATGTAGAA......2430.330.000.000.000.33
...........................................................................GTTTCTG-GGGCAATTCTCTAAAAAACT.................................................................27480.020.020.000.000.00
........................................................................AATGTTTCTG-GAGCAATTCTC..........................................................................21390.030.000.000.000.03
............................................TCGGATTTTGAAGTGGCA--TACCTCT.................................................................................................25280.040.040.000.000.00
.............................................................A--TACCTCTAAATGTTTCTG-G....................................................................................20340.030.030.000.000.00
.....................................ATCTTAGTCGGATTTTGAAGTGGC...........................................................................................................24260.040.000.000.000.04
.........................................TAATCGGATTTTGAAGTGGCA--TACCT...................................................................................................26250.040.040.000.000.00
.......................................CTTAATCGGATTTTGAAGT..............................................................................................................19260.040.040.000.000.00
.....................................................GAAGTGGCA--TACCTCTAAATG............................................................................................21370.030.000.000.000.03
.......................................CTTAATCGGATTTTGAATTGGC...........................................................................................................22260.040.040.000.000.00
.......................................................................................................................................ATTTTGTGTAATTTTTTTA..............1950.200.000.000.000.20
...................................................................................................ATCTGCATTCAAATTTGGA..................................................19170.060.000.000.000.06
........CTGAAGTTCTAAAGTCCATAACT.........................................................................................................................................23110.090.090.000.000.00
...........................................................GCA--TACCTCTAAATGTTTCTG-GAGCA................................................................................26190.050.000.000.000.05
............................ACTCAACTAATCTTAATCGG........................................................................................................................20330.030.000.000.000.03
...................................................................................................ATCTGCATTCAAATTTAAAA.................................................20240.040.000.000.000.04
................................................ATTTTGAAGTGGCA--TACCT...................................................................................................19320.030.000.000.000.03
....ATAGCTGAAGTTCTGAAGTCCATAACT.........................................................................................................................................2720.500.500.000.000.00
.......................................CTGAATCGGATTTTGAAGTG.............................................................................................................20280.040.000.000.000.04
...........................................................................GTCTCTG-GCGCAATTCTCTAAAA.....................................................................23510.020.000.000.000.02
.........TGAAGTTCTAAAGTCCATATCTCAACT....................................................................................................................................27100.100.000.000.000.10
........................................................................................ATTCTCTAACAATCTGCGTT............................................................20130.080.000.000.000.08
.....................................ATTTTAATCGGACTTTGAAGTGG............................................................................................................23200.050.000.000.000.05
........CTGAAGTTCTAAAGTCCATAACTCA.......................................................................................................................................25110.090.000.000.000.09
.....................................................................CTAAATGTTGCTG-GAGCA................................................................................18260.040.040.000.000.00
...................................................................................................................................................TTTTTTGATCCAGAAATACA.2020.500.000.000.000.50
...................................................TTGAAGTGGCA--TACCTCTAAATGTT..........................................................................................25340.030.000.000.000.03
..............................................................................................................AATTTAGxAATTTATTTATTT.....................................20120.080.000.080.000.00
.......................................................................AAATGTTTCTG-GAGCAATTCTCTA........................................................................24390.030.000.000.000.03
.....................................ATCTTAATCGGATTTTGAAGTGGC...........................................................................................................24260.040.000.000.000.04
.............................................................G--TACCTCTAAATGTTTCTG-GAGCA................................................................................24210.050.050.000.000.00
........................................TTAATCGGATTTTGAAGTxGCA--TA......................................................................................................23170.060.000.000.000.06
........................................................................AATGTTTCTG-GAGCCATTCTCTAAA......................................................................25380.030.000.000.000.03
............................................TCGGATTTTGAAGTGGAA--TAC.....................................................................................................21330.030.000.000.000.03
....................................................TGAAGTGGAA--TACCTCTAAATGT...........................................................................................23340.030.000.000.000.03
.......................................CTTAATCGGATTTTGAAGTGG............................................................................................................21260.040.000.000.000.04
...................................................................................................ATCTGCATTGAAATTTAGAATTT..............................................23140.070.000.000.000.07
.....................................................GAAGTGGCA--TACCTCTAAATGT...........................................................................................22370.030.000.000.000.03
.....................................................................CTAAATGTTTCTG-GAGCAATT.............................................................................21250.040.040.000.000.00
...............................................................................................................ATTTAGxAATTTATTTATTT.....................................19130.080.000.080.000.00
.......................................................................................AATTCTCTAAAAAGCTGCATTCAAA........................................................25410.020.000.000.000.02
................................................ATTTTAAAGTGGAA--TACCT...................................................................................................19260.040.000.000.000.04
..............................................................................................................AATTTAGxAATTTATTTAT.......................................18500.020.000.000.000.02
.......................................................AGTGGCG--TACCTATAAATGTT..........................................................................................21290.030.030.000.000.00
1741 scaffold_4845:17513855-17514010 + 41.19
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAAT---TATTTAAAAGATTAATTTCACGCGAA----GATAT------------TTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGTGCTCACC-CTGGCTGCCATCGCCTGCAAGGGGCAGCCCC-AATACAATCCCTACCTGCGCAACCCCTACTACAGGGATCTGTACTACAGGAATCGGGATCTCTACAATCTTCGCCGTTTCTACGATGGCTTCTATAGGAAGTACAATCC----CTACAT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
......................................................................................CTACAGGxATCGGGATCTC.........................................................1820.500.000.000.000.50
...................................................................CCTACAACAGGGATCTGAA............................................................................1920.500.000.000.000.50
.....................................................................................ACTACAGGAATCGGGATCTCT........................................................2120.500.500.000.000.00
.....................................................................................TCTACAGGxATCGGGATCTC.........................................................1920.500.000.000.000.50
.................................................................................................................................................................T21330.030.000.000.000.03
1397 scaffold_4820:8526846-8526957 + 41.11
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTG---------AAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCTGCAGTCCATAACTCAA--CTAATATCAATCGGAATTTGAAGTGGGATACCTCTAAATGTTCCTGGAGCAATTCTCTAAAAAACTGCATTCAAATTTAGAATTTTATTTTT--------------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........................................................................................GCAATxAAATTTAGAATTT.............................................1872.430.570.000.001.86
.......................................................................................TGCAATxAAATTTAGAATTT.............................................1951.400.600.000.000.80
.......................................................................................TGCAATxAAATTTAGAATT..............................................1861.170.000.000.001.17
.............................................................GTTTCTGGAGCAATTCTCTAAA.....................................................................22380.080.050.000.000.03
.......................................................CTAAATGTTTCTGGAGCA...............................................................................18260.080.040.000.000.04
........................................................TAAATGTTTCTGGAGCAATTC...........................................................................21410.050.000.000.000.05
.................................................ATACCTCTAAATGTTTCTGG...................................................................................20340.030.030.000.000.00
...............................................................................................AATTTAGAAxTTTATTTAT--------------------------------------18500.020.000.000.000.02
.........................................GAAGTGGCATACCTCTAAATGT.........................................................................................22370.030.000.000.000.03
........................................................TAAATGTTTCTGGAGCAATTCTC.........................................................................23380.030.030.000.000.00
....................................................................................ATCTGCATTGAAATTTAGAATTT.............................................23140.070.000.000.000.07
.......................................................CTAAATGTTGCTGGAGCA...............................................................................18260.040.040.000.000.00
........................................TGAAGTGGAATACCTCTAAATGT.........................................................................................23340.030.000.000.000.03
................................TCGGATTTTGAAGTGGAATAC...................................................................................................21330.030.000.000.000.03
...............................................................TTCTGGAGCAATTCTCTAAAAAACTGC..............................................................27280.040.000.000.000.04
..........................................................AATGTTTCTGGAGCCATTCTCTAAA.....................................................................25380.030.000.000.000.03
.......................................................CTAAATGTTTCTGGAGCAATT............................................................................21250.040.040.000.000.00
.........................................CAAGTGGCATACCTCTAAAT...........................................................................................20400.030.000.000.000.03
.........................................GAAGTGGCATACCTCTAAATG..........................................................................................21370.030.000.000.000.03
.................................................GTACCTCTAAATGTTTCTGGAGCA...............................................................................24210.050.050.000.000.00
...................................................................................AATCTGCGTTCAAATTTAGAA................................................21470.020.020.000.000.00
.........................................................AAATGTTTCTGGAGCAATTCTCTA.......................................................................24390.030.000.000.000.03
............................................GTGGCATATCTCTAAATGT.........................................................................................19410.020.020.000.000.00
...........................................................ATGTTTCTGGAGCAATTCTC.........................................................................20390.030.030.000.000.00
........................................................................AATTCTCTAAAAATCTGCATTCAAAT......................................................26510.020.000.000.000.02
..........................................................AATGTTTCTGGAGCAATTCTC.........................................................................21390.030.000.000.000.03
................................TCGGAATTTGATGTGGCATACCTCTA..............................................................................................26250.040.000.000.000.04
..............ACTCAA--CTAATCTTAATCGG....................................................................................................................20330.030.000.000.000.03
..................AA--CTAATCTTAATCGGAAT.................................................................................................................19230.040.000.000.000.04
..........................................AAGTGGCATACCTCTAAATG..........................................................................................20380.030.000.000.000.03
........................................................................AATTCTCTAAAAAGCTGCATTCAAA.......................................................25410.020.000.000.000.02
.......................................TTGAAGTGGCATACCTCTAAATGTT........................................................................................25340.030.000.000.000.03
.............................................................GTTTCTGGGGCAATTCTCTAAAAAACT................................................................27480.020.020.000.000.00
1341 scaffold_4820:970365-970531 + 40.73
TCCGATGACCCATGGCGGGAGAGGAT------------TATGAAAGACAATTTGAAATTAAATATCTGT----------GTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT---TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCCACGACTGAAGTTCTAAAGTCCATAACTCAACTTATCTTTATCGGAATTTAAAGTGGCATACCTCTAAATGTTTCTG-GAGCAATTCTCTAAGAAATTGCATTCAAATTTAGAATTTTATTTTTTTTAAATTTTTTTGTATTTTTTCTGATGTGATGATATGTAG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.....................................................................................................GCAATxAAATTTAGAATTT................................................1872.430.570.000.001.86
....................................................................................................TGCAATxAAATTTAGAATTT................................................1951.400.600.000.000.80
....................................................................................................TGCAATxAAATTTAGAATT.................................................1861.170.000.000.001.17
.........................................................................GTTTCTG-GAGCAATTCTCTAAA........................................................................22380.080.050.000.000.03
....................................................................TAAATGTTTCTG-GAGCAATTC..............................................................................21410.050.000.000.000.05
...................................................................CTAAATGTTTCTG-GAGCA..................................................................................18260.080.040.000.000.04
.......................................................................................................................................TTTTTGTTGTTTTTCTGATGT............2160.170.000.000.000.17
......................................................AAGTGGCATACCTCTAAATG..............................................................................................20380.030.000.000.000.03
.........TGAAGTTCTAAAGTCCATAACTGAAC.....................................................................................................................................26110.090.000.000.000.09
....................................................................TAAATGTTTCTG-GAGCAATTCTC............................................................................23380.030.030.000.000.00
...................................................................................................TTGCAATxAAATTTAGAATTT................................................2020.500.000.000.000.50
....................................TATCTTGATCGGAATTTAAAGTGG............................................................................................................2440.250.000.000.000.25
.......................CCATAACTCAGCxTATCTTT.............................................................................................................................1930.330.330.000.000.00
.............................................................ATACCTTTAAATGTTTCTG-GA.....................................................................................21120.080.000.000.000.08
.....................................................................................................................GTTTATTTTTTTTTAATTTTT..............................2160.170.170.000.000.00
..........................TAACTCAGCTTATCTTAATCGGAATT....................................................................................................................26110.090.090.000.000.00
............................................................................................................................................GTAATTTTTCTGATGTGAT.........19130.080.000.000.000.08
.....................................................CAAGTGGCATACCTCTAAAT...............................................................................................20400.030.000.000.000.03
............................................TCGGAATTTGATGTGGCATACCTCTA..................................................................................................26250.040.000.000.000.04
......................................................................................ATTCTCTAATCAATTGCATTC.............................................................2160.170.000.000.000.17
.......................................................................ATGTTTCTG-GAGCAATTCTC............................................................................20390.030.030.000.000.00
............................................................................................................AATTTAGAAxTTTATTTATTT.......................................20120.080.000.080.000.00
........................................................GTGGCATATCTCTAAATGT.............................................................................................19410.020.020.000.000.00
....................ACTCCATATCTCAACTTATC................................................................................................................................20210.050.050.000.000.00
................................AACTAATCTTAATCGGAAT.....................................................................................................................19230.040.000.000.000.04
........................CATAACTCAACTTATCTTA.............................................................................................................................19270.040.000.000.000.04
........................................TTTATCGGAATTTAAAGTG.............................................................................................................1920.500.000.000.000.50
......................................................................AATGTTTCTG-GAGCAATTCTC............................................................................21390.030.000.000.000.03
...................................................................CTAAATGTTTCTG-GCGCA..................................................................................18320.030.000.000.000.03
...........................AACTCAACTTATCTTAATCGG........................................................................................................................21240.040.000.000.000.04
.............................................................ATACCTCTAAATGTTTCTG-G......................................................................................20340.030.030.000.000.00
.....................................................GAAGTGGCATACCTCTAAATG..............................................................................................21370.030.000.000.000.03
........CTGAAGTTCTAAAGTCCATAACT.........................................................................................................................................23110.090.090.000.000.00
..............................................................................................................TTTAGAAxTTTATTTCTTTTA.....................................2060.170.170.000.000.00
...........................................................GCATACCTCTAAATGTTTCTG-GAGCA..................................................................................26190.050.000.000.000.05
............................ACTCAACTAATCTTAATCGG........................................................................................................................20330.030.000.000.000.03
...............................................................................................................................................TTTTTTATGATGTGATGT.......1820.500.000.000.000.50
.........TGAAGTTCTAAAGTCCATATCTCAACT....................................................................................................................................27100.100.000.000.000.10
......................................................................................ATTCTCTAAGCAATTGCATTCAAA..........................................................2470.140.000.000.000.14
.................................................................CTCTAAATGTTTCTG-TCGCAATTCT.............................................................................25230.040.000.000.000.04
..........................TAACTCAACTTATCTGTATCGGAT......................................................................................................................24120.080.000.000.000.08
........CTGAAGTTCTAAAGTCCATAACTCA.......................................................................................................................................25110.090.000.000.000.09
............................................................................................................AATTTAGAAxTTTATTTAT.........................................18500.020.000.000.000.02
.....................GTCCATAACTCAACTTATCTTC.............................................................................................................................22150.070.070.000.000.00
...................................................................CTAAATGTTGCTG-GAGCA..................................................................................18260.040.040.000.000.00
................CTAAACTCCATAACTCAACTT...................................................................................................................................21230.040.000.000.000.04
...................................................TTGAAGTGGCATACCTCTAAATGTT............................................................................................25340.030.000.000.000.03
.....................................................AAAGTGGCATACCTCTAAAT...............................................................................................20280.040.000.000.000.04
............................................................................................................................................GTATTTTTTCTGATGTGATGAT......2220.500.500.000.000.00
...........................AACTCAACTTATCTTATTCGGA.......................................................................................................................22240.040.000.000.000.04
....................................TATCTTGATCGGATTTTAAAGT..............................................................................................................22150.070.000.000.000.07
.....................................................................AAATGTTTCTG-GAGCAATTCTCTA..........................................................................24390.030.000.000.000.03
.............................................................GTACCTCTAAATGTTTCTG-GAGCA..................................................................................24210.050.050.000.000.00
.......................................CTTAATCGGAATTTTAAGTGGC...........................................................................................................22140.070.000.000.000.07
.......................................................................................................................................................................C18320.030.000.000.000.03
......................................................................AATGTTTCTG-GAGCCATTCTCTAAA........................................................................25380.030.000.000.000.03
.............................................................................................................................................TATTTTTTAGGATGTGAT.........1820.500.000.000.000.50
....................................................TGAAGTGGAATACCTCTAAATGT.............................................................................................23340.030.000.000.000.03
.............TTTCTAAACTCCATAACTC........................................................................................................................................19220.050.050.000.000.00
.....................................................GAAGTGGCATACCTCTAAATGT.............................................................................................22370.030.000.000.000.03
...................................................................CTAAATGTTTCTG-GAGCAATT...............................................................................21250.040.040.000.000.00
.....................................................................................................................TTTTATTTTTTTTTAATGT................................19110.090.090.000.000.00
.............................................................................................................ATTTAGAAxTTTATTTATTT.......................................19130.080.000.080.000.00
................................................................................................................................................TTTTTCTGATGTGATGAT......1890.110.000.000.000.11
................................................ATTTTAAAGTGGAATACCT.....................................................................................................19260.040.000.000.000.04
.......................................................AGTGGCGTACCTATAAATGTT............................................................................................21290.030.030.000.000.00
.................................................................................................................................................TTTTCTGATGCGATGATGT....1980.130.130.000.000.00
.....................................ATCTTCATCGGAATTTAAAGT..............................................................................................................2120.500.500.000.000.00
959 scaffold_4784:1237167-1237331 + 40.69
TCCGATGACCCATGGCGGGAG------------------------AGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATT-TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAAAGACTGAAGTTCTAAAGTCCATAACTCAACTTATCTTAATCCGATTTTGAAGCGGC--ATACCTCTAAATGTTTCTG-GAGCAATTCTCTAAAAAACTGCATTTAAATTTGGAAATTTATTTTTTATACATTTTTTTGTAATTTTTTGGGTGTTAATATATTG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...........................................................................................................TTAAACTTCGAAATTTAT...........................................1831.000.000.000.001.00
...........................................................................GTTTCTG-GAGCAATTCTCTAAA......................................................................22380.080.050.000.000.03
......................................................................TAAATGTTTCTG-GAGCAATTC............................................................................21410.050.000.000.000.05
.....................................................................CTAAATGTTTCTG-GAGCA................................................................................18260.080.040.000.000.04
.....................................................................................................CTGCATTCAAATTTGGAAATTT.............................................22470.020.020.000.000.00
......................................................AAGTGGC--ATACCTCTAAATG............................................................................................20380.030.000.000.000.03
......................................................................TAAATGTTTCTG-GAGCAATTCTC..........................................................................23380.030.030.000.000.00
.........TGAAGTTCTAAAGTCCATAACTGAAC.....................................................................................................................................26110.090.000.000.000.09
...............................................................ATACCTTTAAATGTTTCTG-GA...................................................................................21120.080.000.000.000.08
..........................................................................................................TTTAAATTTCGAAATGTAT...........................................1930.330.000.000.000.33
.....................................................CAAGTGGC--ATACCTCTAAAT.............................................................................................20400.030.000.000.000.03
.................................................................................................................TTGGAACTTTATATTTTA.....................................1840.250.250.000.000.00
................................AACTTATCTTAATCGGAT......................................................................................................................18250.040.000.000.000.04
.........................................................................ATGTTTCTG-GAGCAATTCTC..........................................................................20390.030.030.000.000.00
...............................CAACTTATCTTAATCGTAT......................................................................................................................19250.040.000.040.000.00
......................................................................................................TGCATTCAAATTTGGAAATTTATTTT........................................26430.020.000.000.000.02
........................................................GTGGC--ATATCTCTAAATGT...........................................................................................19410.020.020.000.000.00
....................ACTCCATATCTCAACTTATC................................................................................................................................20210.050.050.000.000.00
.............................................................................TTCTG-GAGCAATTCTCTAAAAAACTGC...............................................................27280.040.000.000.000.04
................................................ATTTTGAAGTGGC--GTACCT...................................................................................................19340.030.000.000.000.03
...........................................................................GTTTCTG-GGGCAATTCTCTAAAAAACT.................................................................27480.020.020.000.000.00
........................CATAACTCAACTTATCTTA.............................................................................................................................19270.040.000.000.000.04
........................................................................AATGTTTCTG-GAGCAATTCTC..........................................................................21390.030.000.000.000.03
.....................................................................CTAAATGTTTCTG-GCGCA................................................................................18320.030.000.000.000.03
...............................................................ATACCTCTAAATGTTTCTG-G....................................................................................20340.030.030.000.000.00
...........................AACTCAACTTATCTTAATCGG........................................................................................................................21240.040.000.000.000.04
...ATAGACTGAAGTTCTAAAGT.................................................................................................................................................2040.250.000.000.000.25
.....................................................GAAGTGGC--ATACCTCTAAATG............................................................................................21370.030.000.000.000.03
...........................AACTCAACTTATCTTAATCGGATTTTG..................................................................................................................27200.050.000.000.000.05
........CTGAAGTTCTAAAGTCCATAACT.........................................................................................................................................23110.090.090.000.000.00
...........................................................GC--ATACCTCTAAATGTTTCTG-GAGCA................................................................................26190.050.000.000.000.05
............................ACTCAACTAATCTTAATCGG........................................................................................................................20330.030.000.000.000.03
................................................ATTTTGAAGTGGC--ATACCT...................................................................................................19320.030.000.000.000.03
...............................CAACTTATCTTAGTCGGAT......................................................................................................................19250.040.040.000.000.00
...........................................................................GTCTCTG-GCGCAATTCTCTAAAA.....................................................................23510.020.000.000.000.02
...........................................................................................................................ATTTTTTATTCATATTTTTGT........................2120.500.500.000.000.00
.........TGAAGTTCTAAAGTCCATATCTCAACT....................................................................................................................................27100.100.000.000.000.10
...............................................GATTTTGAAGCGGA--ATACCTCTAAAT.............................................................................................26190.050.000.000.000.05
...................................................................CTCTAAATGTTTCTG-TCGCAATTCT...........................................................................25230.040.000.000.000.04
...............................CAACTTATCTTAATCGGAT......................................................................................................................19250.040.040.000.000.00
...................................................................................................AACTGCATTTAAATTTGGAA.................................................2050.200.000.000.000.20
........CTGAAGTTCTAAAGTCCATAACTCA.......................................................................................................................................25110.090.000.000.000.09
.....................GTCCATAACTCAACTTATCTTC.............................................................................................................................22150.070.070.000.000.00
.....................................................................CTAAATGTTGCTG-GAGCA................................................................................18260.040.040.000.000.00
...............................CAACTTATCTTAATCTGAT......................................................................................................................19260.040.000.040.000.00
................CTAAACTCCATAACTCAACTT...................................................................................................................................21230.040.000.000.000.04
...................................................TTGAAGTGGC--ATACCTCTAAATGTT..........................................................................................25340.030.000.000.000.03
...........................AACTCAACTTATCTTATTCGGA.......................................................................................................................22240.040.000.000.000.04
.......................................................................AAATGTTTCTG-GAGCAATTCTCTA........................................................................24390.030.000.000.000.03
...............................................................GTACCTCTAAATGTTTCTG-GAGCA................................................................................24210.050.050.000.000.00
........................................................................AATGTTTCTG-GAGCCATTCTCTAAA......................................................................25380.030.000.000.000.03
....................................................TGAAGTGGA--ATACCTCTAAATGT...........................................................................................23340.030.000.000.000.03
.............TTTCTAAACTCCATAACTC........................................................................................................................................19220.050.050.000.000.00
.....................................................GAAGTGGC--ATACCTCTAAATGT...........................................................................................22370.030.000.000.000.03
.....................................................................CTAAATGTTTCTG-GAGCAATT.............................................................................21250.040.040.000.000.00
4150 scaffold_4929:22681709-22681810 - 40.12
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTT-CACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------------------------AAAATTCTAAAGTAAATATTCGATATTGAACTTATTTAAAATGTATATTTTTAATATAA--------TCTAAATATTTTCACACATAAAATTTAAAATATGAACCTTAGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.........................................TAAAGTAAATATTCTGTATTG..................................................................................2130.330.000.000.000.33
2659 scaffold_4690:10929315-10929437 - 40.08
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAA-TATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTT-----GTCCCTATAATAACCGGGGTGCCAACATACAT
TATACTATCATACGACA------ACTTATCCACCACAATATCATGCTGAAATGA----AT-----GTAATATAAGAAAACAAGTTAATA----AGAATTTATTTCTAAGCTTCGCGTATACCTACGTCAAACGG-------ACAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2261 scaffold_4929:25930045-25930142 + 40.02
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATAT---TTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A-----------------------------------------------GGTATTTGTAATGGGTCTTATGTAATAGAACTCTTCCATTATTGTAAATGTAACATTTCCACATTTGTCTGCATTATTGCCGATGTTCCAATTTACA-
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head


droFic1 - 0 hit found

droEug1 - 32 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2987 scf7180000409463:813252-813375 - 48.94
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATT------TCACGCGAAGATATTTATT-----TTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-----GACACAAATCGAGAGTGCACTGAGAAAAAGGCAGGGTAGCTACTTATCTGTAAGAGGAAAAACTTAAGAAATAAGTTCTTTTATGAAGTAATGAAATTTATTCATCTTTCACCTTTATTTCTA-------------------------
SizeHit CountTotal Norm
2772 scf7180000409142:16534-16652 - 48.94
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTG---AAATTAA---ATATCTGTGTGTGAA---------ATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------GAAAAAGAAGAAAGAAAATTTTCATAAATTCATGTAAACCTTTTTATGAATTGCCAGATATATTAAAAAAAATCAATAATAAATTAATATATTTAAATTTGCGTTATTTCCTATAAAAA-------------------
SizeHit CountTotal Norm
804 scf7180000409046:2005-2123 + 45.92
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT----
-----------AGGGTCGGAAACGGGTATAAAA----ATATAAAATAAAATATTTAAAAGTAACATATTTTAAAAATAAAACCACCATCGAGCAAATATATTTTGACGTTTT-------------CGAGGCCCTAAAAAACATCGAA
SizeHit CountTotal Norm
1714 scf7180000409880:37519-37645 + 45.64
TCCGATGACCCATGGCGGGAGAG----GATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTGAAGGGGCATACTTTGAAGACTGAAATTGTCA-CCATTTTTTTAAATTAAATCTCT------AAAGTAGTAAAAAAAAGTTGTATTAC----------TTTTTTTTGCATT---TTGTAGAAAAGCTGATATCTCGATAAATAT
SizeHit CountTotal Norm
3570 scf7180000409862:22728-22856 - 44.68
TCCGATGACCCAT-------GGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAA-AGATTAATTTCACGCGAAGATATTTATTTTTACATTTGT----CCCTATAATAACCGGGGTGCCAACATACAT
ATTGATGATCAGTTAAATACAGTAAAAAGATTTTTTAAAAATGAAATAGAATTTAGGCTAATGCGTAGCATATTGTGTAGCCACACAAATTTTAGAAAAATATGTTTACAAATTTATTCATTACACCC--------------------------T
SizeHit CountTotal Norm
1065 scf7180000409440:100030-100166 + 44.47
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAA-AGATTAATTTCACGCGAAGATATTTATTTTTACA---------TTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGCCATATT-----------GCGGATCTGGACGATCAATGTGAAACCGCGCTCTCGTAACAGATTTTTATAAAGTGAGTTAGTGTCACTGATAAAAACCTTTTTTT-CGTTCACGGTGTTGTTCCTCAGAATACCCGGGGATCCGTTA-----
SizeHit CountTotal Norm
1350 scf7180000409663:934632-934731 + 43.26
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTA---------CATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAAACTAATTTAAATTAAAGATCCTTAAAAAATTTTGTTAAAAATATGAATAAAAAGTGAAAGTTATTATAGTTATTTTGTGAAATTTTGTGCCTAAAA----------------------
SizeHit CountTotal Norm
27 scf7180000405371:1616-1747 + 43.01
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGG-------TGCCAACATACAT
TGCATTTACCTATCATGG-CGTAATTTTTGACTGACG----AAGATTTCCGCTCTGGATGTTAAAGTTCTTTTCGATCGAACCACTAGAGAAGGAAGACCTACCCA------------AATTAACCCGCCAGTTATATTC-CGCCAACCC
SizeHit CountTotal Norm
3133 scf7180000409568:159924-160033 - 41.86
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTA-ATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAA---CATACAT
TT-------------------------TTTAAGTACATCTTTAAAATAACTGCTTTTGTGAGG-----CTTCAAAGATTGTATAATATGAGGAGAAATT-------AGACTTGTCCTAGTGTTATCAGGTTCCTAAACTGTTTTCAT
SizeHit CountTotal Norm
2423 scf7180000408875:287-392 - 41.84
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATTTTAATCGAGATTTTGGTAAATATAAGTATAACAAAAATTAATTGTATAAACATGTATATTTTATTAAAATTGTTAATATACACATCATTTTGCACACATATAA
SizeHit CountTotal Norm
2488 scf7180000408951:14936-15033 - 40.43
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGAT---TAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATCCAACTCTGAATGAGTTATGGACTTATGAAGGTAAATTAAAAAATAAGTTAATAAATTTGAAATAATTTAAATTTTATAAAATTTCATGTGAAGAT------------------------------------------------
SizeHit CountTotal Norm
2699 scf7180000409063:38252-38357 - 39.72
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTT----------------GAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G------------------AAGTGCTTATGTATGACAATTGATATATATTTTACATAAAAAATAAATATATAAATATATAATTTGTCATAGAAGGAAAAGTAAACAAAAACATTTATGTTTACA-----------------------------------
SizeHit CountTotal Norm
2964 scf7180000409449:2827-2923 - 39.01
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G-----------------------ATTATAAGTATAACTTTCAAAGTAGATATCTTTATTATTATTAGGTTATTAGATTAAGTCTTTTTAAAGTTATTCTTTTAACCTTTTGCTTTAATA-----------------------
SizeHit CountTotal Norm
3461 scf7180000409766:1054163-1054254 - 38.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AAATAAATATGAAATACTTAATCCAAAGATATACTTTTTTATTTATTTATTCAAAGAAGTAAAAACTTTTGTAGGTATTTATTTTTTTCTTT--------------------------------
SizeHit CountTotal Norm
1823 scf7180000405544:12227-12318 - 36.17
TCCGATG--------ACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATT---ATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCGGCGCGTGAGCAACAGATGCCGTAACATGCTCCTGAAAGATGTTTACAAACTAGATGCATGAGTGTGAAGTGACCCTTTATTAGGATAA--------------------------------------------------------------
SizeHit CountTotal Norm
439 scf7180000408192:21445-21520 + 35.0
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------------------------ATAATTTAAATTTAAATATATAATATATAATATATTAAAACGATTCATGTAAAATTGAGCAGTATATTTTTGCCTT---------------------------------
SizeHit CountTotal Norm
1122 scf7180000409472:312692-312779 + 34.75
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G-------------------------------------------------------TGAGTAAATATAAGTAAAGTCTTAATTTGATTGAAATATTTATATATTTTTATAGGCTATTATGATGCTCTAGCTGCGAAAGTTTCT
SizeHit CountTotal Norm
1784 scf7180000405360:1196-1269 - 33.84
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------GGCCCAGGGCTCGTGTGGATAAAAAACTGTGACATTAATTTAAATTACTGTGTGTGA--TTGCGAAAAAAATTAAT-------------------------------------------------------------
SizeHit CountTotal Norm
1528 scf7180000409752:1047063-1047135 + 32.7
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------GGCCCAGGGCTCGTGTGGATAAAAAACTGTGACATTAATTTAAATTACTGTGTGTGATT----------------------GCGAAAAAATTAAT------------------------------------------
SizeHit CountTotal Norm
557 scf7180000408822:29652-29731 + 32.22
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAA--ATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CCACACCCACTATAACGAGAAA-AACTGTGGCATCCACATTATTATAATTTATATCTGCGTTTGACATTGTATAAACTATT----------------------------------------------------------------
SizeHit CountTotal Norm
506 scf7180000408750:6623-6719 + 31.02
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATC--TGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AGCAGAAAATAGAATCAAATGTAAGCTGCGAAAGCCAGTTAGATATAGCGATTGAGCAGTTAGAAAGGTATTTAAAAGACACATTT-----GAGGACATTCA-------------------------------------------
SizeHit CountTotal Norm


droBia1 - 34 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1465 scf7180000302069:1281651-1281776 - 48.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGAT--ATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------GGGAAGAAATTGAAGTGCAAATATGCAAAACATATCTATGTACGATATTATTTAAGTTTTTTTTTTCAAACTTCTATGCAGTAGTTTCTGGGGTGCATCTTATAGTGCCCA-GTTTCATAAAGACAT
SizeHit CountTotal Norm
1653 scf7180000302291:1321220-1321344 - 48.48
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGC----GAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------GGTGGTAGGGTAGCATGGGGTATATCGGGAATGGAAATACACGTTTCCGGTACCATTAAAAACTTTACTTTCACGTTTCAGAGGATTTCATTT----CAAACGAATTTTTTTTACCAGGAGTGCCATC------
SizeHit CountTotal Norm
1014 scf7180000299226:154731-154858 - 47.82
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGT--CCCTATAATAACCGGGGTGCCAACATACAT
-----------------GAAGAGTATTGAAAATTGTAGTCAGAAGTTAGTTAATAATATATATACTTATTTAAGGGGTTATTTCCAGTAGTTAGTTATTCTAAAAAACTTTATTTTTCTATAGTTGATAAGGATGGGCTATAAAT
SizeHit CountTotal Norm
191 scf7180000301213:49246-49355 + 43.84
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGA---TTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AACGAAAA---ATGGTGGGAGAATAATATGAAAC--------AAATTATAGTTTTGAGAGTTTTATTATTTTTAAGAACTTCAATGTCAGGGACAATCCTTAAAAATTTCACATGTCGTTA-------------------------
SizeHit CountTotal Norm
1572 scf7180000302155:1664946-1665068 - 42.71
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTA------AATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTTTTTATCCATTATGAAATAT------CAAAGAAAAAATGTATTTAATTTTTATTTAC--------------------TATTTAGCTCTCCACATAAATTTAGTTTTTCGTTACTGTAAAATTAACTAACCGAGCTCAAAGATGGAT
SizeHit CountTotal Norm
598 scf7180000302143:2012637-2012740 + 42.06
TCCGAT--GACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT------
AACGATCGGAAAATTGGTGGGAAAATAATATGAAACAAATT---------------------------------------------ATAGTTTTGGTACT--TTTTGACATATTATCTTATAATATTGGGAATATAATTTTTTATGTTTTT
SizeHit CountTotal Norm
1676 scf7180000302295:105967-106067 - 38.35
TCCGAT--GACCCATGGCGGGAGAGGATTAT---GAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACAT---TTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCGAACTAACAT----------------CTGAAGTAATAATATGCGACATTAAATTTCTGTGTGTAAAACTATCCC---------TTC--CGTG----TATTTCTATATACATGACATGTTCCTATATTGA-------------------
SizeHit CountTotal Norm
1820 scf7180000302437:8100-8199 - 37.99
TCCGATGACCCATGG----------CGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAA-AGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACAGCTATATGATATAGTCGTCCGAATTGGATAAAATTTAATTCAAAATTCA------------GAACTGATTTAAAAATATTATTTCCAAGCGCAGAAGGTTGT------------------------------------------
SizeHit CountTotal Norm
312 scf7180000301495:854815-854895 + 37.59
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAA--------TTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AGAGAAATCAGAAAAAATATTTAAAAAATCGGAATAAATATTCTTTTTGTCATAATATTTAAAAGATTGTATTTAGACGAA---------------------------------------------------
SizeHit CountTotal Norm
1024 scf7180000299321:9043-9139 - 36.85
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAA-AAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------------------ACATTGAATATCTGTGTGTAAAACTATCTCTTCTGGCTATTTCTATACACATA-ACATGTTCCTATATTC----CGCCGTCATCCGAATTCTCAGTGTATGT
SizeHit CountTotal Norm
1528 scf7180000302132:75126-75220 - 36.17
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATT---------TAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCGAATGACGCCTAAACTGTCAAGGTTTTGGTAGACTTCTCAAAATGAAAAATAAATTTACAAAATTATGTTTTAGCATTTAAAAAGTATTTTTA---------------------------------------------------------
SizeHit CountTotal Norm
1043 scf7180000299500:1391-1473 - 35.46
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATTTATATATATTTATATTTATATATAATTATATTTATATATAATTATATTTATATATATTTATATTTATATTTATATATATA-----------------------
SizeHit CountTotal Norm
1336 scf7180000301564:18564-18660 - 35.03
TCCGAT--GACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AACGATCGGAATATTGGTGGGAAAATAAAATGAA--ACAATTTATAACT---------TTCGTGATTTTTTACATAGAACCTTCTAAGCTTGGAAATAACCATTTTTA-------------------------------------
SizeHit CountTotal Norm
703 scf7180000302291:1048316-1048396 + 34.75
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------------------------AAAGTTTAAAATTACGGGTAGGTATTTGAATTTTTCTAATTGATGTTGTTTAAAAAAAGATAGTTCCGCTTACATTTTACC----------------------------
SizeHit CountTotal Norm
1687 scf7180000302327:13561-13649 - 34.25
TCCGATGACCCATGGCG-GGAGAGGATTAT-GAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GCTGTCATACAAACGATCAGAA-AATTTGTAGGAAAATAATATGAAA-----ATTATATCTATTTTGTTTTTTAACATATAAGCTTCACGCAAGG--------------------------------------------------
SizeHit CountTotal Norm
1394 scf7180000301704:13034-13112 - 33.75
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTCAAAA-----------------------------ATCAATAAATAAATATTTAAAAAAGAAAATAAATAAATGAATGAATGAATAAAAATATATATATTTATACA-----------------------------------
SizeHit CountTotal Norm
1116 scf7180000301157:5543-5620 - 33.33
T--CCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTCAAATAACC-ATA----------------AAAAA-----TATAATATAATATTAGTAT-----AATATATTAAAAATTAATTTCACACAAAGTTGTCCTTTT----------------------------------------
SizeHit CountTotal Norm
1810 scf7180000302432:158301-158382 - 33.33
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AGACGGGTCTGAAACAAATACAAGATATAAATGTCTTCTTAGGGAATTTTTTATAAAGCTTACTTGCTGTAACGATATTTCT------------------------------------------
SizeHit CountTotal Norm
3 scf7180000296981:13248-13322 + 32.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T---------------------------------------------TATATATTTATTTGTATATTTATTTATGTATTTATTTATTTATATATTTATTTATTTTTATATTTATTTATTTA-----------------------
SizeHit CountTotal Norm
607 scf7180000302155:964802-964876 + 32.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGATTCTTTGAAGCAGCAATTCGGTCTGTGAAATTATTAATAAAAAAAATTATATAATCAAAAAAATGTTTTT--------------------------------------
SizeHit CountTotal Norm
981 scf7180000297872:8680-8748 - 30.76
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T--------------------------------------TTTCCATTAAGTTT-CACCTGTGAAATCTCTTTCAAGCGGAACTTCCCAGGGAAATATTTACCTTTTCA-----------------------------------
SizeHit CountTotal Norm


droTak1 - 138 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4072 scf7180000414441:15526-15661 - 53.19
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCA------------CGCGAAGATATTTATTTTTACATTT------GTCCCTATAATAACCGGGGTGCCAACATACAT
TTTTAT-------------------------AATACAAATTGAAAAATAAGACTTATTTGTCAATTTTTTTAAAAAAGTAACTCTTACTTGCGATCCCTGTAAATATTTCTATAAGTGTAATTTAAGGAAACCCTATAACGAGTACAATTCTTACATGCTT
SizeHit CountTotal Norm
72 scf7180000410641:13788-13918 + 50.61
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTG-TGTGAAATT----ATTTA--AAAGATTAATTTCACGCGAAGATATTTATTTTT--------ACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-CCACTAACCCA--ACTGTAGCGTTCTCTCTTGTTTAATTTAAAATTAAGTATTTTGTAAG-GGAATTTTAAATTTAAAAAAAATTCTGTTCGCCGGAATACACGCGATTTCCGAAAAAAATATTTATCCCAAT------------------------
SizeHit CountTotal Norm
4216 scf7180000414634:10897-11026 - 49.9
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCT-GTGTGTGAAATT---ATTTAAA--AGATTAATTTCA-------------------CGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-CCACTAACCCA--ACTGTAGCGTTCTCTCTTGTTTAATTTAAAATTAAGTATTTTGTAAGGGAATTTTAAATTTAAAAAAAATTCTGTTCGCCGGAATACACGCGATTTCCGAAAAAAAATTTATCCTA------------------------------------AT
SizeHit CountTotal Norm
3075 scf7180000410830:7315-7444 - 49.9
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCT-GTGTGTGAAATT---ATTTAAA--AGATTAATTTCA-------------------CGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-CCACTAACCCA--ACTGTAGCGTTCTCTCTTGTTTAATTTAAAATTAAGTATTTTGTAAGGGAATTTTAAATTTAAAAAAAATTCTGTTCGCCGGAATACACGCGATTTCCGAAAAAAAATTTATCCTA------------------------------------AT
SizeHit CountTotal Norm
2351 scf7180000415711:275615-275744 + 49.22
TCCGATGACCCATGGCGGGAGAGGATTATGA---AAG-ACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GCGGTAGGTCGAT--------------ATAAAAACAAATGATTTTACATTCATATATTGGTTACGGGTAGTTTTGACTTTTTTAATATTATGTC---AGATGCTTTTTTGTATCGGTACCTACATTTATCGGGGTGCTATCGTTTAC
SizeHit CountTotal Norm
1152 scf7180000414461:6027-6169 + 48.99
TCCGATGACCCATGGCGGGA----GAGGATTATGAAAGACAATTT-GAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGA-AGATATTTATTTTTACATTTGTCCCTATA---------ATAACCGGGGTGCCAACAT-ACAT
GACTGCCGTCCATAGTGATACCTATCGAAATGTAGAAGACATTTTTCAAATTGGA------------CCATTCTTTAAAAAGTTA----TACGCAATCAAAATTTGTTTATATATCTATCTCCCTCGCACTCCCATTAGCTGAGGTTCGAATATTAGAT
SizeHit CountTotal Norm
2164 scf7180000415562:1921-2058 + 48.94
TCCGAT--GACCCATGGCGGGAGAGGA---TTATG-AAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTAT---T-TAAAA------------------GATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTACAACCGCTTCAAAATGTGATGGGATGTTTATTCTTCGACAGTTAAAGA--GAAAATTAATGTTTCAAATTCTTATTTTAAAAAAATGAATGCCAGAGATAGGATAATTTTAGGCTTAA-----TTTTATTTCATCGGTCCCT--------------------------
SizeHit CountTotal Norm
302 scf7180000412240:13432-13561 + 48.94
TCCGATGACCCATGGCGGGAGAGGAT-TATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTACATTTTTTTTGGTTAGAGAGGAATTTAGGAAGACAGAAAGAAAATAAATTTTTTATTCGGATAACATTTATGCGCTGACTTCAAAATCAAGGAACC-------ATATAAACTCATTTAGTTTTCGAG-------ATCACAA
SizeHit CountTotal Norm
4095 scf7180000414477:65250-65387 - 48.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATT----TCACGCGAAGATATTTA-----------------------TTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CATAGT-TCCCGTA----GGAAGGATCAAAAAATATAATGCCAAAGTAA---------TACGAAAGCAGCTAAAATTTTGATTGTTTTAACATATAAGCACGTAAATCTAAATTTAATGTATTTGTAAGTTTATAGGTAGCCCCAAGATAA------------------T
SizeHit CountTotal Norm
3004 scf7180000410561:962-1098 - 48.58
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTG-TGTGTGAAATTATTTAAAAGATTAATT-TCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCTACGACTTTTAAAATTACTAAAAATTAAAACTAAATGTGAGAACAAGTCTTTTGGTTTTGGTGTAAATCATAGGATTTTTTAATATTATAAGTTGGTGATTTTTTTGTTAAAAAATATTATAATCGTAGTGCCA--------
SizeHit CountTotal Norm
1177 scf7180000414491:7414-7533 + 48.53
TCCGATGACCCA----TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATA--TTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CCCTACCACTAAATATTCGATGGAATCGACCATAATAATGTATATAAAA-TGAACTTCCTTGCATTAAATTACTTAAAAGAACAATTTTTAGAGAACAAAATCCAATCCTTAAACCTGTCC----------------------------
SizeHit CountTotal Norm
1288 scf7180000414648:1928-2051 + 47.84
TCCGATGACCCA---TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GGTGTTT---TAGGGTGAAAAATGAAAATGATTTGATGCAATCGGAAAGATAATAGTTAAATAAAGAACATTCCAAAAGAAAAATTTTAAAATCTAGTATTTGCTTGTACATTTCCCA-TCTAAAAAC------------------
SizeHit CountTotal Norm
4149 scf7180000414535:6398-6547 - 47.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAA----TATCTGTGTG-----TGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTAC---ATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCTATAGGGGAGTGTAGGGTAAGGTGACGAA---CGATTCGTTTTTTGAATGTTACTTTTGTAAAAATCAATATTTTTTAAAAGTGTAA--ACGCAGAAAGTTGCTTACATCTACTGAGCATATCCCTGTAAAATTCGAAATTCCAATGCAGCT
SizeHit CountTotal Norm
4657 scf7180000415270:60429-60540 - 47.28
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAA-GATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------GAAAGGAAAAAATTATTAATA--GACTTGCGATT----------ATGTGAAATCATTTTAAACATTTGATTTCTAGCGAT-CTATTCACTTTTGCTTGTAAAACTTTAATTAGATGAATGTTAA-------
SizeHit CountTotal Norm
2619 scf7180000415856:152070-152204 + 47.2
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAG-----------------------------ATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGCACTTTTGAAACTAATTCTCTCTATATGAAATTTTATTAAGAAAACTTTTCACCTGTCATTTTCATATGATACTAATTTCAAAGGTAACTTTTTAATTTCACATTTATTTGTAAAACATTTA-------AATGTACAA
SizeHit CountTotal Norm
3305 scf7180000412515:5274-5410 - 46.99
TCCGAT---------GACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAA---TAACCGGGGTGCCAACATACAT
TTTGCAAGGGCCGATAAGATTAGGTG---------T--ATGTGTTAATTATAATTTTGCAATTATTGCGTTTTAACATTTAAATGAATTTTATTTTATAACATTAAACATTTTTATACCCGTTACTCGTAGAGTAAAAGG-------GTATATTT
SizeHit CountTotal Norm
5703 scf7180000415917:3600-3720 - 46.93
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTT---CACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AAAAAATTCCCACGGCCG----CCATTTTGAAAGATAAAAACAAAATAAAAATC---GTTTAAAATTTATAAGAACAATATAATCAATAAGCCAAGTTACAAAATTCCTTATTCGTTAAAAAAAT------------------CAC
SizeHit CountTotal Norm
3418 scf7180000412843:30934-31071 - 46.81
TCCGATGACCCATGGCGGGAGAGGATTATGAA---AGACA---------------------ATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCTAATATACATTTTGATTGAAAATTCAATTGGTAGAAAGGCCAAACCTACCTGATAAAGCATTACATTTAAACC---------ACCAATATACGAAAAATACATCCAACAAGGAACTATACTTTTTTATTTTCGCCAGTATATTA--------------------
SizeHit CountTotal Norm
2861 scf7180000415976:16310-16442 + 46.81
TCCGATGACCCATGGCGGGAGAGGATTA--TGAAAGACAATTTGAAATTA---------AATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCG-AAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT---------
TGAAACGGTCCAAAAAAAACTGTTATTAGATGAACAAAACTTTAAAATGCTCAGTAAAAACGGTCTTTGCCTTACAC-CTTTAAAAATTTAAGGTAATATATAGAA------------------------------CATATATTTGAAAATACATATATGGTAA
SizeHit CountTotal Norm
936 scf7180000414133:16602-16717 + 46.32
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTC-ACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTTAT-------------------------AATAAAAATTGAAAAATAAGACTTATTTGTCAATTTTTTTAAAAAAGTAATTCTTACGT---GCGATCCCTGCCTAAATCCTTATTTGTATTAAAGTATGCGCCAAAAAAAAA
SizeHit CountTotal Norm
2725 scf7180000415874:463468-463575 + 46.1
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAA---ATTAAATATCTGTGTGTGAAATTATTTAAAAGATT----AATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G----------------------AACTTGGAAAGCCCTCTTTAATCGATTAATTATTTGTACGCAAAATGATTTAAAAGGTGATGAAATCTGGTGCGCAGGGAAATATTTTTTGCTCTGAACCTAGAGCA--------------------
SizeHit CountTotal Norm


droEle1 - 7 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
7 scf7180000486807:9902-10004 + 44.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGAC-AATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAA-GATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-----GATCCATATCGGTAAAT--TTATAAGAAACTGACTTGAAAGCGGAAAATTTTATGGAAATCCAATCAATATTATTAAATTCATCAAAAGATATTTCTTCTGACA-----------------------------------
SizeHit CountTotal Norm
166 scf7180000491238:317970-318082 + 42.35
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAAT--TAAATATCTGTGTGTGAAATTATTTAAAA--GATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TAA--TT-CCCTCTGC-----AAGGATATAAAAAGCATCCTGTTTTGGTCTATATCTCTTTAAATATTAACTTAACTGAAAAAAGTTACAAAACATAATATGTATATTTAAATCAGTCCTT--------------------------
SizeHit CountTotal Norm
255 scf7180000490526:35690-35777 - 39.72
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATT--TCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T----------------------------TAAAAACTAATGGCAATTAAATTTCTTTATGGTACATAAATGAAAACAGTAATTTTTTATGCTTACAAACTTTTTATATTATTAGTC-----------------------------
SizeHit CountTotal Norm
151 scf7180000491193:4528617-4528703 + 35.46
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------ATTATGAAAAATAATTTTACATTTAAAGATTTTCTCTGGGTGTATAAGAGAAGGCAATTTATAACCGACAAATAAAGTTTTATTTTT--------------------------------
SizeHit CountTotal Norm
375 scf7180000491272:1392881-1392951 - 30.5
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T--------------------------------------TTGTCATTGATAATAAATAAGAACAATTAATTAATAAGGTATTGTTGGGCGAAGCCATTGACGTTTACAT----------------------------------
SizeHit CountTotal Norm
127 scf7180000491104:179349-179434 + 28.56
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAA-TT--AAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CATAATGAT----GT--TGACAGGTCTGTGAACGTTAACCTCAGAACTCAAGAAATCTCTGCTGAAGAGTGTGCAAAAATATGGTTTTATG-------------------------------------------------------
SizeHit CountTotal Norm
338 scf7180000491199:689961-690012 - 26.95
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------AGACTATTGTTTGATTAAATACTTGTATACAAAATTATTGCAAATATTAATT------------------------------------------------------------
SizeHit CountTotal Norm


droRho1 - 59 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
542 scf7180000767875:903-1047 + 50.97
TCCGATGACCCA----TGGCGG---------GAGAGGATTATGAAAG---ACAATTTGAAATTAAATATCTGT---GTGTGAAATTATTTAAAAGAT----TAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT--------
TCGGAGCACCCGACTATAGCGTTCTCTCTTGTTTTGTATTAAGAAAGGGTACACTTTTAAATTAAGTGTTTGGAGAGTTCTGAATTTCTTAAGAGATATCATAAG-----------------------------TTCTTTGTAATAAGAGGTATTTTAGCAGTCATGTCTCTCA
SizeHit CountTotal Norm
4485 scf7180000779715:469-596 - 49.52
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GAATATTA-------------AAGAGTTTGAAATCAATCATTATAACCAACATCAGTATGTGCAAATATTTAAATATTTATATAAATATGCATCGACATTATCTCACGGCTGTGCCTTTAAAA--TAGATTGTAATAATATAT
SizeHit CountTotal Norm
154 scf7180000761650:6537-6678 + 48.03
TCCGATGACCCAT-GGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGA---------------------------AATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGT--CCCTATAATAACCGGGGTGCCAACATACAT
TCCACAGACCCACTTTTGGGAGAGGGAAAGGGAAAATGGCGTGATGA-GCA----------TGACATTGCGTAGGTCAGGGATAGGGTTCAGCTGCTGCCAGACATCGAAGCCATGTCGA---CGTGATTTTTCTATTTGTTATCTTAGAATAGCC-----------------
SizeHit CountTotal Norm
495 scf7180000767087:468-579 + 46.1
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATT-------TGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAA--------------TTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AAAGGAATATCAAAATCAATTAAAAAACTAAAATTAAATATTTGTATAAGCAATCTTTAAAAGAAATAAAACTGATGTCCGCCTTTTACGGGATTAAATTCATTTCGACAGT---------------------------------
SizeHit CountTotal Norm
1556 scf7180000777328:11848-11960 + 43.9
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTT---ACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT------
-------------------------------------ATCTGAAATGAAAAAATCA--AATTACATTATTTAAAAAATAAATTTCAGGAGAGCACTTTAATGTTTTGGACACCCAAAAATCGAATATAGAACGCGCTAACTTACCTATGTTC
SizeHit CountTotal Norm
4552 scf7180000779932:17431-17535 - 43.56
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATAT--------------TTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T----------------------------GAAATAAAAATTAAAAATAAATATATATATAAATATTTATTGAAGAAATGTATTA-----GTAGTTATTTAAAGTGCACCCTTTACTTTGTACTTTGTACTTATCGCAA-------------------
SizeHit CountTotal Norm
1327 scf7180000776368:623-739 + 42.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTA-------AATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTGCTGACAAGCAGTGTTAGAGAATACTGAAATATCGTTTGGTATTTTTTTAGTAACTCTTGGATGTGAGGTTGCCACAAAGTTGGGTTACCAGTAGCGCTAGTTTTATATCTAAA---------------------------------
SizeHit CountTotal Norm
1035 scf7180000773660:12008-12171 + 40.4
TCCGATGACCCAT-GGCGGGAGAGG--------------------ATTATGAAAGACAATTTGAAATTAA-ATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTA------TAATAACCGGGGTGCCAACATACAT
TCCAATGACCCAGTTTCGAGAGAGGCAAGGAGATATGGCGATATAGTAATGATAGGCAG----ATATTGGGATAGTC-GCAGCCATATTGTCCAGAAGCTAGACGGAGCG--GGAGTTATTAAATTAGTGTTTGTGCCGAAATCAAAAATAAAGTGAGTGTTAGAAGAATT
SizeHit CountTotal Norm
1756 scf7180000777950:22555-22658 + 38.97
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATATGCATGTATTTATGTGTATGTACATGTGTTTGTATATACATTTTTACGCGAATATGTTTTTGCATGTTTCTTTCCCTTTAAA--TTTATATTTAAATGTCTAA
SizeHit CountTotal Norm
4306 scf7180000779262:8438-8558 - 38.58
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAAT----TTGAAATTAAATATCTGTGT----GTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATA-CAT
T--------------------AAATTTACAAAATATAATTCTTTTAAAATCGAATGCTGGTGTCAGTAAAAGAATAATTA--AGAATAATTTAGC-----AATAGTCACCTTAGTATTAGTCTCTG-AACAGTCAAA----CAACAAATTAA
SizeHit CountTotal Norm
1372 scf7180000776649:5373-5483 + 38.3
TCCGATGACCCA----TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGT-------GTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCAATGACCCAGTTTTGACAAGGGAATATGGCGATATAGCAATGATAGGCAGATATTGGGATAGTCGCAGCCATATTGTCCAGAAAGCTAGACGGAGCGGGAGTTATTTA-------------------------------------------
SizeHit CountTotal Norm
2338 scf7180000780104:2935-3025 + 37.59
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGAC--AATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------GAAAAACAATCATAAAACCGTTTATTTTAGGTAAAATATCCATACCGGAAAATATACTACAAATAAATTCAGGAGGCAACTATTTATTTTT--------------------------------------
SizeHit CountTotal Norm
1487 scf7180000777014:1699-1787 + 36.88
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------------------------------------------------GTTTAAAGTAGTATTAAAAAGATTAACACCCTGCCAACATATTCAAAATGAAAGTCAACACTTGAGGAAATGGGAAACTTGCATATAT
SizeHit CountTotal Norm
3526 scf7180000774780:546-642 - 36.88
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCAC--------------------GCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAAAAAATTTGAAATTTATAATATTTTTGAAAAAATAGTGAAAAAATTTACCTTATTTTTGAGTAGCCGCCATTTTATGAAAACATTTTTTTTTGC------------------------------------
SizeHit CountTotal Norm
845 scf7180000771957:36048-36222 + 36.21
TCCGATGACCCATGGCGGGAGAGGATTATGAAAG-------------ACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATA----------------------TTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CCATATAAC--TGAACGAGTGGAAATGACATAACTTTGGTGTTTTTAAAGTTAGGAAGTTGGGAATTTGTATGACTAGGTATAT-CAACTTCGGCTCCGCCCGAAGTTAGCTTTAATTTCTTGTTTTTCTACTTTTTTTTGCAACTTTCCCTTTTTTTACACAGATAAAAAAATACAA
SizeHit CountTotal Norm
2333 scf7180000780101:150309-150396 + 36.17
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A-------------------------------ACAAAACTTGGAGTTACATATATCTGTCGAAGTGGGTGCATAAAATTAAACTCGAGTTAAAAACTAATTATATACATTTGGCGCCAT------------------------
SizeHit CountTotal Norm
2283 scf7180000780007:219851-219938 + 36.13
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A------------------------------------------------ATGTTTGCATTTGAAATAAATGAAGTAATAACTTTTATGCGATGTTAAACATTTTTATGCAG---TCCACAAACATTGTGGAGAAAA----CAT
SizeHit CountTotal Norm
2981 scf7180000768400:22391-22464 - 33.46
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTCAACGCGATAAGAACCGAAATATTTTTTTGTGAAATTATTAAGGACAGTATCG------CAGTATATTTTTTTGT--------------------------------------
SizeHit CountTotal Norm
2352 scf7180000780146:16867-16937 + 33.33
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATCAGCTATCTACGGGGA------------------------------------------TGCAAATATTTTAATAAATAAAAAAACGGCAAAATATATTTTTTTACATTTTT------------------------------
SizeHit CountTotal Norm
2386 scf7180000780249:53811-53884 + 33.33
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATTCGATACTAAAGAGTTATTTTAAAAGTTATTTAAAAGTTTTTCTTAACGATAGAATTTGCCTTTTTAAATCT--------------------------------
SizeHit CountTotal Norm
2690 scf7180000763132:16-94 - 33.2
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAA---------------AGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A-------------------------------------------------CATATGTTTTTATAATTAATTTAAATATATAAGACGAAAAATTTAATTTAATATGCAGATATTCATTTTTA--TTTATCC----------------------------
SizeHit CountTotal Norm


droKik1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
141 scf7180000298698:14727-14830 - 46.81
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAA---TATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACA------TTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G-----------------------------AAAAACGAAGCAAAACTAAAAAAAACATGTGTGTGACATCATTTTAAACATTAAATTCAAAACAAAACTTTGATTTGGCCAACACGTTTGGGCGCTATAATAA-------------------
SizeHit CountTotal Norm
273 scf7180000302752:6186-6289 - 40.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTG---------AAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ACTT--AACCA--ATCGGTTTAAAATTTCGAACATAACTTTGAAATTTAATT---GTACAGGTACTCACGTAAAGCTTTTA-AAAATT--TTTAATGTTAATATATATAGTTTT--------------------------------------
SizeHit CountTotal Norm
148 scf7180000299007:1173-1234 - 28.04
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------------------AAATTAAATAA-------AAAATATTTTTTAAAAATTGTTTTCATTGAAAAACAATTATTTTTTCATTT--------------------------------
SizeHit CountTotal Norm
129 scf7180000297840:607-662 - 25.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T--------------------------------------------------------------------TTAAAAAAACAACATATGGAGAACATATTAATTTATGTACATTTTCTTATGATAA-------------------
SizeHit CountTotal Norm
241 scf7180000302391:761102-761151 - 24.82
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
---------------------------------------------------------------AAATATTTAACAAAATAATTTGAAGCTAAACGATATATCTTTATCTTTAT------------------------------
SizeHit CountTotal Norm


droAna3 - 13 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
526 scaffold_13334:5190-5293 + 42.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AAAAAATTAGTAAAAAAAATAATAAATAAAAAAAAATATGGTGGGATTTTTTAAAAGATATTTTTTATATGGCAATTGGTAGTTAAATATTAGTCTTTTTAAGA--------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................................................................................................................TTTTTAGGA--------------------1830.330.000.000.000.33
....................................GATAATAAGTAAAAAAAA.........................................................................................1830.330.000.000.330.00
...............................AAAAAAATAAGAAATAGAAAA...........................................................................................2120.500.000.000.000.50
.........................................TAAATAAAAAAAAAAATGGAGG................................................................................2220.500.500.000.000.00
................................AAAAAACAATAAAAAAAAAA...........................................................................................20250.040.000.000.000.04
....................................AATAATAAAAGAAAAAAA.........................................................................................18130.080.000.000.000.08
.......................................AATGGATAAAAAAAAA........................................................................................16170.060.000.000.060.00
................................AAAAAATAAGAAATAAAGAA...........................................................................................2030.330.000.000.000.33
...............................AAAAAAAGAAAAAATAAAAAAAA.........................................................................................2390.110.000.000.000.11
.................................AAAAATAATAAAGGAAAAA...........................................................................................1960.170.000.000.000.17
................................AAAAAAAAATAAACAAAAA............................................................................................19430.020.000.020.000.00
..........................................................................................ACAGTTGGTAGTTAAATA...................................1820.500.000.000.000.50
..................................AAAAGAAGAAATAAAAAA...........................................................................................18100.100.000.000.000.10
248 scaffold_13082:232507-232613 + 41.13
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTG---------------------------TGTGTGAAATTATTTAAAAGATTAAT--TTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTAAAAATTATTTAAAATTAAATAATTAATTTATTAAAAATTTAAATAATTAATTTATTAGAAATTATTAAAAAAATTAATAATTAATTTAAAAATATTAATTT----------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
............................................................................................................TAATGAATTAAAAAATATTAATT.........................................2320.500.000.500.000.00
....................................................................................ATTAGCAATTATTAAAAAATT...................................................................2120.500.500.000.000.00
...............................................................................................................TGAATTAAAAAATATTAAT..........................................1920.500.000.500.000.00
.........................................................................................................................AATxTTTATTT----------------------------------------1920.500.000.500.000.00
................................................................................................................GAATTAAAAAATATTAATT.........................................1920.500.000.500.000.00
.................................................................................................................AATTTAAGCATATTAATT.........................................1820.500.000.000.500.00
...........................................................................GATTAATTTATTGGAAATT..............................................................................1920.500.500.000.000.00
...................................................................................TATTAGCAATTxTTAAAAAAA....................................................................2020.500.000.000.000.50
1182 scaffold_13417:4674888-4674974 - 39.14
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTG--CCAACATACAT
TCTG----------------------------------------------------------TATTTTACATTATTATTAATTTCATGCTTTTATTTTATATATCACATTTATTCCTTTTATATACAGGGTGCGCCATCTTTTAT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................................................................TTAAATTATTATTAATAT.............................................................1830.330.000.000.000.33
.................................................................TTTACTTTATTACTAATTT.............................................................1920.500.000.000.000.50
..................................................................TTACTTTATTATTGATTT.............................................................1820.500.000.000.000.50
.....................................................................CATTATTTTTAATTTTATG.........................................................1920.500.000.000.000.50
......................................................................................................................ATACATACAGGGTGCGCCATC......2120.500.000.500.000.00
.................................................................TTTACTTTATTATTGATT..............................................................1820.500.000.500.000.00
..................................................................TTACTGTATTATTAATTT.............................................................1820.500.000.000.000.50
1163 scaffold_13389:72731-72834 - 37.86
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A------------------------------GAATTACTTTAAAATTAAAAATTTTTAATAAAAATAATTAAGAAAATTAATTA---------ATTATTATTGTTTTCGTTGTTTGTACCGAAATTAAAATTAAAATTTATTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................................AAAAGTTTTTAAAAAAAA..............................................................................1850.200.000.000.000.20
794 scaffold_12507:41-124 - 37.15
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T--------------------------ATAATATACAATTTTATATTATATTTATATAAATTATATTATTAAGATAATATAGTTGAAACGTAAGTGTT-ATATTAATATTT--------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...........................................................................AATATAGTTGAAACGTAAGTGTT-AT..........................................25287.5078.501.000.507.50
..............................................................................ATAGTTGAAACGTAAGTGTT-ATA.........................................23239.0031.501.501.005.00
...........................................................................AATATAGTTGAAACGTAAGTGTT-ATA.........................................26239.0029.501.001.007.50
...........................................................................AATATAGTTGAAACGTAAGTGTT-ATATT.......................................28223.0021.500.000.501.00
...........................................................................AATATAGTTGAAACGTAAGTGTT-ATAT........................................27222.5020.500.000.002.00
..............................................................................ATAGTTGAAACGTAAGTGTT-ATATT.......................................25221.5021.000.000.500.00
..............................................................................ATAGTTGAAACGTAAGTGTT-AT..........................................22220.5017.000.000.503.00
............................................................................ATATAGTTGAAACGTAAGTGTT-ATA.........................................25216.0011.500.500.004.00
..............................................................................ATAGTTGAAACGTAAGTGTT-............................................20215.0011.500.000.503.00
...........................................................................AATATAGTTGAAACGTAAGTGTT-A...........................................24212.008.500.000.003.50
............................................................................ATATAGTTGAAACGTAAGTGTT-AT..........................................24212.0011.500.000.000.50
..............................................................................ATAGTTGAAACGTAAGTGT..............................................19211.008.000.000.003.00
...........................................................................AATATAGTTGAAACGTAAGT................................................2028.006.000.000.002.00
.................................................................................GTTGAAACGTAAGTGTT-ATA.........................................2028.004.000.000.004.00
..............................................................................ATAGTTGAAACGTAAGTGTT-ATATTA......................................2628.007.000.000.500.50
...........................................................................AATATAGTTGAAACGTAAGTGTT-............................................2327.506.500.000.001.00
.............................................................................TATAGTTGAAACGTAAGTGTT-ATA.........................................2426.505.500.000.001.00
..............................................................................ATAGTTGAAACGTAAGTGTT-ATAT........................................2426.506.000.000.500.00
...........................................................................AATATAGTTGAAACGTAAGTGT..............................................2226.004.000.000.002.00
..............................................................................ATAGTTGAAACGTAAGTGTT-A...........................................2125.502.500.000.502.50
..........................................................................TAATATAGTTGAAACGTAAGTGTT-ATA.........................................2725.003.001.000.001.00
.................................................................................GTTGAAACGTAAGTGTT-ATATT.......................................2224.504.500.000.000.00
................................................................................AGTTGAAACGTAAGTGTT-ATA.........................................2124.501.500.000.003.00
...................................................................ATTAAGATAATATAGTTGAAACGTAAGT................................................2824.004.000.000.000.00
............................................................................ATATAGTTGAAACGTAAGTGTT-ATAT........................................2624.003.000.000.500.50
............................................................................ATATAGTTGAAACGTAAGTGTT-A...........................................2323.503.000.000.000.50
.................................................................................GTTGAAACGTAAGTGTT-AT..........................................1923.002.500.000.000.50
.............................................................................TATAGTTGAAACGTAAGTGTT-AT..........................................2323.003.000.000.000.00
.................................................................................GTTGAAACGTAAGTGTT-ATAT........................................2123.001.500.000.001.50
...............................................................................TAGTTGAAACGTAAGTGTT-ATA.........................................2222.501.500.000.001.00
..........................................................................TAATATAGTTGAAACGTAAGTGTT-AT..........................................2622.502.000.000.000.50
............................................................................ATATAGTTGAAACGTAAGTGTT-ATATT.......................................2722.502.500.000.000.00
............................................................................ATATAGTTGAAACGTAAGTGTT-............................................2222.502.500.000.000.00
...................................................................ATTAAGATAATATAGTTGA.........................................................1922.001.500.500.000.00
..........................................................................TAATATAGTTGAAACGTAAGTGTT-............................................2422.002.000.000.000.00
..............................................................................ATAGTTGAAACGTAAGTGTT-ATATTAAT....................................2822.002.000.000.000.00
................................................................................AGTTGAAACGTAAGTGTT-AT..........................................2021.500.000.000.001.50
.............................................................................TATAGTTGAAACGTAAGTGTT-............................................2121.500.500.000.001.00
.........................................................................ATAATATAGTTGAAACGTAAGTGT..............................................2421.501.500.000.000.00
............................................................................ATATAGTTGAAACGTAAGT................................................1921.501.500.000.000.00
986 scaffold_13124:62253-62311 - 29.08
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTAAAAATTATTTAAAATTAAATAATTAATTTATTAAAAATTTAAATAATTAATTT-----------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
583 scaffold_13417:2982178-2982236 + 29.08
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTAAAAATTATTTAAAATTAAATAATTAATTTATTAAAAATTTAAATAATTAATTT-----------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
560 scaffold_13339:2135863-2135921 + 28.37
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTAAAAGTTATTTAAAATTAAATAATTAATTTATTAAAAATTTAAATAATTAATTT-----------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................AAAGTTTTTTAAGATTAA..............................................................................................1830.330.000.000.000.33
..............................AAAAGTTxTTTAAAATCAAA.............................................................................................1930.330.330.000.000.00
154 scaffold_12926:100733-100791 + 28.37
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TC-------------------------ATTAAAAATTATTTAAAATTAAATAATTAATTTATTAAAAATTTAAATAATTAATTT-----------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
587 scaffold_13417:3835511-3835564 + 25.53
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------------------------AATTTCTGTGTTATAATTAATTTGGAAAATTAATTAAAGGCACGTATATTTGCT-----------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
496 scaffold_13272:349609-349659 + 23.4
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGAAAATTTGAAACAAAATTTATATATACGCAGCTGGCCAAAACAATAA--------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
494 scaffold_13272:329185-329235 + 23.4
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGAAAATTTGAAACAAAATTTATATATACGCAGCTGGCCAAAATAATAA--------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
......................................................................AAAAAGAATAA--------------------------------------------------------------1970.140.000.000.000.14
.......................................................................AGAATAAGAA--------------------------------------------------------------1840.250.250.000.000.00
.......................................................ATATACACTGCTGGCCAAAATAA.................................................................2320.500.000.000.000.50
1122 scaffold_13335:3104513-3104518 - 3.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCCTAT-----------------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
None None


droBip1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
37 scf7180000395238:27783-27922 + 53.19
TCCGATGACC-CATGGCGGGAGAGGATTA----TGAAAGACAATTTGAAAT-------------TAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CGTCATGGCCATATAACGGCAGACGATGGTATGTATAATACAACTTTTCGATAAAAAAAATATATAAAATTTTTTACATTCAATTATTACAGTTTTAGACTTCACGCAAATCGTGGAGCTTTTACATGTGCCCCTACAAT---------------------
SizeHit CountTotal Norm


dp4 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
47 Unknown_group_37:8363-8450 + 34.75
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GGCAATGA----------------GGTAGGAGGGACAATTTTGTATTCTATAATTATCGTTAGACCTACGCAAAGGATACATTTTACTGCGGGTTGTATATTTT---------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
...........................................................................GATACATTTTACTGCGGGTGT...............................................2120.500.500.000.000.00
...................................................AATTATCGTTAGACCTATGCAAAGGA..................................................................2620.500.000.000.500.00
.............................................................................TACATTTGGCTGCGGGTTGTA.............................................2120.500.000.500.000.00
.....TGA----------------GGTAGGAGATACAATTTTGTATT................................................................................................2620.500.500.000.000.00
.........................................TGTATTCTATAATTATCGTTAGACC.............................................................................2520.500.000.500.000.00
................................................................................ATTTTACTGAGGGTTGTCT............................................1920.500.000.500.000.00
.....TGA----------------GGTAGGAGGTACAATTTGGTA..................................................................................................2420.500.500.000.000.00
.............................................................AGACCTACGCAGAGGATACA..............................................................2020.500.500.000.000.00
203 Unknown_singleton_138:985-1001 - 7.8
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GGC------------------------------------------------------------------------------------------------------------------------------GTTCCAATATAGGG
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None None


droPer1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
722 super_5473:1216-1318 + 39.28
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATA-------ACCGGGGTGCCAACAT--ACAT
T----------------------------------------------ATACGTGTGTAAGTGGAACTATGCAGGGGAATGATTTCACATGAAGAAAGTCGATT---CGCCTGTACCTATTGCATTCCTAAGCTGAGGTTTAAGCTTTAACAT
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.......................................................................................................................TGCATTCCTAAGCTGAGCTTTAAGC........2520.500.000.500.000.000.00
......................................................................................CATGAAGAAGGTCGCTT---C.............................................1820.500.000.000.000.000.50
..................................................................TATGCAGGGGAATGATTTCA..................................................................2020.500.500.000.000.000.00
332 super_207:14505-14569 + 29.08
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------------------------------------------------------------------------AATTACTCACAAACATACTTATTGTAAAACTTGGAGCTGTTATAATTTTAAGTCCAACATACTT
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
................................................................................................CTTAATGTAAAACTTGGAGCT..........................2120.500.000.000.000.000.50
....................................................................................................ATGTAAAACTTGGAGCTGTT.......................2020.500.500.000.000.000.00
612 super_3250:30-80 + 26.24
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGAC----AATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------AAAGACTTTTATTTTAAACTTAAATATCTTTATGTCACAAGATTTAAATGA------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
............................................................TATGTCACAAGATTTAAATG...................................................................2021.000.000.000.000.001.00
............................................................TATGTCACAAGATTTAAATGT------------------------------------------------------------------2120.500.000.000.000.500.00
...........................................................TTATGTCACAAGATTTAAA.....................................................................1920.500.000.000.000.000.50
465 super_1265:2303-2344 + 20.57
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-----------------------------------------------------------------------------------------------------TTTACATCTGCGACTATAATTATTGCTGTGCCGACAGGAAT
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.....................................................................................................................ATAATTATTGCTGTACCT........18212.000.000.500.000.0011.50
...................................................................................................................CTATAATTATTGCTGTACCT........2026.000.000.500.000.005.50
................................................................................................................CAACTATAATTATTGCTGTACC.........2223.000.000.000.000.003.00
....................................................................................................................TATAATTATTGCTGTACCT........1923.000.000.000.000.003.00
...........................................................................................................ATCTGCAACTATAATTATT.................1922.500.000.000.000.002.50
............................................................................................................TCTGCAACTATAATTATTGC...............2022.000.000.000.000.002.00
............................................................................................................TCTGCAACTATAATTATTG................1922.000.000.000.000.002.00
.........................................................................................................................TTATTGCTGTACCTACAGGA..2021.501.000.500.000.000.00
............................................................................................................TCTGCAACTATAATTATTGCTGTACC.........2621.500.000.000.000.001.50
..........................................................................................................CATCTGCAACTATAATTATTGCTG.............2421.500.000.000.000.001.50
....................................................................................................................TATAATTATTGCTGTACCTAC......2121.000.000.000.000.001.00
...................................................................................................................CTATAATTATTGCTGTACCTAC......2221.000.000.000.000.001.00
......................................................................................................TTTACATCTGCAACTATAATTATTGCTG.............2821.000.000.000.000.001.00
.............................................................................................................CTGCAACTATAATTATTGCT..............2021.000.000.000.000.001.00
.................................................................................................................AACTATAATTATTGCTGT............1821.000.000.000.000.001.00
.....................................................................................................................ATAATTATTGCTGTACCTA.......1921.000.000.500.000.000.50
..................................................................................................................ACTATAATTATTGCTGTACCT........2121.000.000.000.000.001.00
.................................................................................................................AACTATAATTATTGCTGC............1820.500.000.000.000.000.50
.......................................................................................................................AATTATTGCTGTACCTACAGG...2120.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTACCTAC......2020.500.000.000.000.000.50
........................................................................................................................ATTATTGCTGTACCTACAGG...2020.500.000.500.000.000.00
...................................................................................................................CTATAATTATTGCTGTACCC........2020.500.000.000.000.000.50
..................................................................................................................ACTATAATTATTGCTGTA...........1820.500.000.500.000.000.00
.................................................................................................................AACTATAATTATTGCTGTACC.........2120.500.000.000.000.000.50
.............................................................................................................CTGCAACTATAATTATTGCTGTACCG........2620.500.000.000.000.000.50
.................................................................................................................AACTATAATTATTGCTGTA...........1920.500.000.000.000.000.50
....................................................................................................................TATAATTATTGCTGTACCC........1920.500.000.000.000.000.50
..................................................................................................................ACTATAATTATTGCTGTACC.........2020.500.000.000.000.000.50
.................................................................................................................AACTATAATTATGGCTGT............1830.330.000.000.000.330.00
...................................................................................................................CTATAATTATTGCTGTACCA........2020.500.000.000.500.000.00
........................................................................................................................ATTATTGCTGTACCTACAGGAA.2220.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTACCC........1820.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTACCG........1820.500.000.000.000.000.50
............................................................................................................TCTGCAACTATAATTATT.................1820.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTACCTACAG....2220.500.000.500.000.000.00
.................................................................................................................AACTATAATTATTGCTGA............1820.500.000.500.000.000.00
.............................................................................................................CTGCAACTATAATTATTG................1820.500.000.000.000.000.50
C-----------------------------------------------------------------------------------------------------TTTACATCTGCAACTATAATTATT.................2520.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTACCTACAGGA..2420.500.000.000.000.000.50
.....................................................................................................................ATAATTATTGCTGTTCCTACAGG...2320.500.000.500.000.000.00
..........................................................................................................................TATTGCTGTACCTACAGG...1820.500.000.500.000.000.00
.........................................................................................................................TTATTGCTGTACCTACAGGAA.2120.500.000.500.000.000.00
...........................................................................................................................ATTGCTGTACCTACAGGA..1820.500.000.000.000.000.50
....................................................................................................................TATAATTATTGCTGTACC.........1820.500.000.000.000.000.50
.........................................................................................................................TTATTGCTGTACCTACAGG...1920.500.000.000.000.000.50
.......................................................................................................................AATTATTGCTGTACCTACAG....2020.500.000.000.000.000.50
1410 super_5342:1412-1459 - 18.06
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATTGGTCAGCTACGATGGC-GTGGTTCTTGAGAATCGATTAGTAATTGA----------------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..TGGTGAGCTAGGATGGC-GTGGTTC....................................................................................................................2428.508.500.000.000.000.00
.TTGGTGAGCTAGGATGGC-GTGGTTC....................................................................................................................2525.005.000.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAAT............................................................................................................2425.005.000.000.000.000.00
.TTGGTGAGCTAGGATGGC-GTGGTT.....................................................................................................................2424.004.000.000.000.000.00
..TGGTGAGCTAGGATGGC-GTGGTTCT...................................................................................................................2523.003.000.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAATC...........................................................................................................2522.502.500.000.000.000.00
.TTGGTGAGCTAGGATGGC-GTGGTTCT...................................................................................................................2622.002.000.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAATCGA.........................................................................................................2721.501.000.000.500.000.00
..TGGTGAGCTAGGATGGC-GTGGTT.....................................................................................................................2321.001.000.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAATCGAT........................................................................................................2821.001.000.000.000.000.00
...............TGGC-GTGATTCTAGAGAATCGATT.......................................................................................................2421.001.000.000.000.000.00
.....TGAGCTAGGATGGC-GTGGTTCTTGAGAA.............................................................................................................2821.001.000.000.000.000.00
..TGGTGAGCTAGGATGGC-GTGG.......................................................................................................................2121.001.000.000.000.000.00
...............TGGC-GTGGTTCTTGAGAATCGATT.......................................................................................................2421.001.000.000.000.000.00
..TGGTGAGCTAGGATGGC-GTGGTTCTTG.................................................................................................................2720.500.500.000.000.000.00
.TTGGTGAGCTAGGATGGC-GTG........................................................................................................................2120.500.500.000.000.000.00
..........TAGGATGGC-GCGGTTCTTGAGA..............................................................................................................2220.500.500.000.000.000.00
................GGC-GTGGTTCTTGAGAATCGATTAG.....................................................................................................2520.500.000.500.000.000.00
...............TGGC-GTGGCTCTTGAGAATCGATT.......................................................................................................2420.500.500.000.000.000.00
...............TGGC-GTGGTTCTTGAGAATCGATC.......................................................................................................2420.500.500.000.000.000.00
..........TACGATGGC-GTGGTTCTTGAGAATC...........................................................................................................2520.500.000.500.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAATCG..........................................................................................................2620.500.500.000.000.000.00
...GGTGAGCTAGGATGGC-GTGGTTCT...................................................................................................................2420.500.500.000.000.000.00
.TTGGTGAGCTAGGATGGC-GTGG.......................................................................................................................2220.500.500.000.000.000.00
.TTGGTCAGCTACGATGGC-GTGG.......................................................................................................................2220.500.000.500.000.000.00
.TTGGTCAGCTACGATGGC-GTG........................................................................................................................2120.500.500.000.000.000.00
.....TGAGCTAGGATGGC-GTGGTTCTTGA................................................................................................................2520.500.500.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGA..............................................................................................................2220.500.500.000.000.000.00
..TGGTCAGCTACGATGGC-GTGG.......................................................................................................................2120.500.000.500.000.000.00
............CGATGGC-GTGGTTCTTGT................................................................................................................1820.500.000.500.000.000.00
..TGGTGAGCTAGGATGGC-GTG........................................................................................................................2020.500.500.000.000.000.00
..........TAGGATGGC-GTGGTTCTTGAGAA.............................................................................................................2320.500.500.000.000.000.00
.TTGGTCAGCTACGATGGC-GTGGT......................................................................................................................2320.500.000.500.000.000.00
...............TGGC-GTGATTCTAGAGAATCG..........................................................................................................2120.500.500.000.000.000.00
.............GATGGC-GTGGTTCTTGAGAATCGATT.......................................................................................................2620.500.500.000.000.000.00
...........AGGATGGC-GTGGTTCTTGAGAATCGATT.......................................................................................................2820.500.500.000.000.000.00
............................TGAGAATCGATTAGTAATTG...............................................................................................2020.500.000.000.000.000.50
..TGGTCAGCTACGATGGC-GTGGT......................................................................................................................2220.500.000.500.000.000.00
.TTGGTGAGCTAGGATGGC-GTGGT......................................................................................................................2320.500.500.000.000.000.00


droWil1 - 40 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
549 scaffold_180772:5217896-5218034 + 53.52
TCCGATGACCCATGGCGGGAGAGGA------------TTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTA-T-TTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GCCGTTGACCAGTGGCGGCGCCAAAGTGCACATATTCTTGTCAGAGTTAGCTGGATAGTATGTTCCTGAAAATTCAATTAAAATTG-AAAGAGGACTTGTTGCAATGAATTTTTTTTTAATATTTGTCTAGATTTCGACC-----------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
........................................................................................................................TATTTGTCTAGATTTCGACC-----------------2142.250.000.000.002.25
...........................................................................................................................................G-----------------18470.090.060.020.000.00
........................................................................................................................TATTTGTCTGGATTTCGACC-----------------2141.000.000.000.001.00
........CTAGTGGCGGCGCTAAAGTGC................................................................................................................................2190.220.000.220.000.00
......................................................................................................CAATGAATTTTTTTATGATA...................................2030.330.000.330.000.00
...................................................................................................................TTTGGTATTTGTCTAGATTTCGA...................2330.330.000.330.000.00
........................................................................................AAGAGGACTTGTTGCAATGA.................................................2030.330.330.000.000.00
...........................................................................................................................................C-----------------19480.020.000.000.020.00
.......................................................................................................................GTATTTGTCTAGATTTCGAC..................2040.250.000.250.000.00
...........................................................................................................................................G-----------------19440.020.020.000.000.00
......................................................................................................................GGTATTTGTCTAGATTTCGAC..................2140.250.000.000.000.25
........CTAGTGGCGGCGCCAGAGTGC................................................................................................................................2190.110.000.110.000.00
2344 scaffold_180772:165013-165142 - 50.99
TCCGATGACCCATGGCGGGAGAGGATTAT-GAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAA----------GATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G--------------------AGGATTATACAGAGATGAGTTGGGTTTAAAAGTCTTCGACATAAAGTAATGAAAACGTTCTTCACATT---ATGTGCTTACTGATGAGAAGCTTTACAAATACATCAATCGGGAAC-TAGTCCCAAAAGAGAT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
1941 scaffold_176501:11094-11227 - 50.35
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGC-----GAAGATATTTATTTTTACATTT--GTCCCTATAA------------TAACCGGGGTGCCAACATACAT
G----------------------AATTATGCGCGATATGATTAAATAAGATATTAGCATGTAAAATAATCCTACTAATTAATTTAAAATATAGTACAGATGTATAGTTGAATATGTAGGTTCCTATATGGGAGAAAAGAGT------AAAGCTGGTATGACT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...........................................................................................AGTAxAGAAGTATAGTTGAA...................................................1929.003.505.500.000.00
..........................................................................................TAGTAxAGAAGTATAGTTGAA...................................................2025.001.503.500.000.00
..........................................................................................TAGTAxAGAAGTATAGTTGA....................................................1923.001.501.500.000.00
................................................................................................AGAAGTATAGTTGAAAATG...............................................1922.000.501.000.500.00
.................................................................................................GAAGTATAGTTGAAAATG...............................................1822.000.001.500.000.50
....................................................................................................GTATAGTTGAAAATGGAG............................................1821.500.501.000.000.00
..........................................................................................TAGTAxAGAAGTATAGTTG.....................................................1821.000.001.000.000.00
....................................................CTAGCATGTAAAATAATCGTACT.......................................................................................2320.500.000.000.000.50
.............................................................................................TACAGATGTATAGTTGAATATTTAGG...........................................2620.500.000.500.000.00
.............................................................................................TACAGATGTATAGTTGAATATTTAGGT..........................................2720.500.000.500.000.00
...........................................................................................AGTAxAGAAGTATAGTTGA....................................................1820.500.000.500.000.00
...............................................ATATATTAGCATGTAATA.................................................................................................1820.500.000.500.000.00
...............................................................................................CAGATGTATAGTTGAATATTTAGG...........................................2420.500.000.500.000.00
...........................................................................................................TGAATATTTAGGTTCCTATATGGGAG.............................2620.500.000.500.000.00
................................................................................................AGAAGTATAGTTGAAAAT................................................1820.500.000.500.000.00
2411 scaffold_180777:3122362-3122487 - 48.23
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGT--------CCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TATTGAAGGCAATTTGGGTTAAGATCTTTTAATGAAAAGGAAAAAAATAAATGAATTTAACTGAATGATAGATATACTCATATATGGTATACATGTCATATAATCACACATATATGTATATACAT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......................................TTTGGGTTAAGATTTTAT...............................................................................................1821.000.001.000.000.00
......................................................................................................................................CATATATTTGTATACAT18190.110.000.000.000.11
...........................................................GATAAGGAAAAAAAGAAAT.........................................................................1920.500.500.000.000.00
....................................................TTTTAGTGAAAAGGAAAA.................................................................................1820.500.000.500.000.00
.......................................................................................................................................ATATATGTATATTCAT18240.040.000.040.000.00
............................................................ACAAGGAAAAAAAGAAAT.........................................................................1840.250.000.250.000.00
...................................CAACTTGGGTTAAGAACT..................................................................................................1820.500.000.000.000.50
.......................................................AAATGAAAAGGAGAAAAA..............................................................................1850.200.000.200.000.00
........................................................AACAAAAAGGAAAAAAAT.............................................................................18140.070.000.070.000.00
..........................................................TGAAAAGGAGAAAAAAAA...........................................................................1860.170.000.170.000.00
....................................................TTTTAGTGAGAAGGAAAAAA...............................................................................2020.500.000.500.000.00
............................................................AAAAGGAAATAAGTAAAT.........................................................................1820.500.000.000.500.00
2175 scaffold_180700:5198210-5198318 - 48.23
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATT----AAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
GC------------------GACGATTTTTAAATTGAAATTGACATTCCTGCAATAGCAATTGATAAATTTTTATAAATGTTTGATTTAAAAAGAATATTTTAAGTTTTACATTCATCCACATGTTA--------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...............................................................................ATTTGATTTAAAAAAAAT..................................................1860.330.000.330.000.00
............................................................................AATGTTTGTCTTAAAAAG.....................................................1820.500.000.500.000.00
..........................................................................AAAATGTTTGATTTAAGAA......................................................1930.330.000.330.000.00
........................................................................TAAAGATGTTTGATTTAAAAA......................................................2120.500.000.500.000.00
.........................................................................ATAATTGTTTCATTTAAAA.......................................................1920.500.000.500.000.00
1969 scaffold_177436:1026-1148 - 47.88
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATT-----AAAT-ATCTGTG----------------------TGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGCAGTGAGCCAT--------------------------TTAAGATGTAAAAAAATAATGTGCGAGTGACCCCGGTCTTTTTCCACTATCAATTGGTTCAAAAAATAAAATGA----GTGCAGTTTTATTTTTACATTTGTACATGTAATTAC------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....................................................AAATATTGxGCGAGTGACC....................................................................................................1860.170.000.170.000.00
......................................................................................................AAAAAAAATGA----GTGCGGT...............................................1840.250.000.250.000.00
..........................................................................................AATGGGTTCAAAAAAAAA...............................................................1870.140.000.140.000.00
...................................................AAAATTATGTGCGAGGGAC.....................................................................................................1960.170.170.000.000.00
.......................................TTAACATGTAAAAAAAAAA.................................................................................................................1990.110.000.110.000.00
49 scaffold_177049:2025-2147 + 47.88
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATT-----AAAT-ATCTGTG----------------------TGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGCAGTGAGCCAT--------------------------TTAAGATGTAAAAAAATAATGTGCGAGTGACCCCGGTCTTTTTCCACTATCAATTGGTTCAAAAAATAAAATGA----GTGCAGTTTTATTTTTACATTTGTACATGTAATTAC------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....................................................AAATATTGxGCGAGTGACC....................................................................................................1860.170.000.170.000.00
......................................................................................................AAAAAAAATGA----GTGCGGT...............................................1840.250.000.250.000.00
..........................................................................................AATGGGTTCAAAAAAAAA...............................................................1870.140.000.140.000.00
...................................................AAAATTATGTGCGAGGGAC.....................................................................................................1960.170.170.000.000.00
.......................................TTAACATGTAAAAAAAAAA.................................................................................................................1990.110.000.110.000.00
2083 scaffold_180398:1-120 - 47.14
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAAT-----TAAAT-ATCTGTGTG----------------------TGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TGCAGTGAGCCAT--------------------------TTAAGATGTAAAAAAATAATGTGCGAGTGACCCCGGTCTTTTTCCACTATCAATTGGTTCAAAAAATAAAATG----AGTGCATTTTTATTTTTACATTTGTACTTGTAAT---------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....................................................AAATATTGxGCGAGTGACC....................................................................................................1860.170.000.170.000.00
..........................................................................................AATGGGTTCAAAAAAAAA...............................................................1870.140.000.140.000.00
...................................................AAAATTATGTGCGAGGGAC.....................................................................................................1960.170.170.000.000.00
.......................................TTAACATGTAAAAAAAAAA.................................................................................................................1990.110.000.110.000.00
435 scaffold_180727:1450685-1450795 + 43.58
TCCGAT-GACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTG-TGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CCAAACCGACGCATTAAGGGAATAAACTATCATGGA-AATATATATTTAATTGTTTATAAGATCGAATTGTTGAA-AACTTAATGTTGTGTCAAAATAGTTTTTATTCAATTT--------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..AAACGGACGCATTAAGGT.............................................................................................................................1823.000.003.000.000.00
......................................ATATATAGTTAATTGTTTTTA......................................................................................2120.500.000.500.000.00
................................................................................................................T--------------------------------1950.200.000.200.000.00
...............................................................................................................TT--------------------------------1950.200.000.200.000.00
...............................................................................................................TT--------------------------------2050.200.000.200.000.00
745 scaffold_181009:2730646-2730752 + 41.51
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATAT---------CTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTGATGATTCAAAAACAGAGATA--------AAACAATTAA-------CTTTCTTTTCTGTCAGATTGTATAAATAATTGTCAGAATAATAT------------------------------CATATATTAACAAAGATAATTATATTCAC
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....................GATA--------GAACAATTAA-------TTTT...................................................................................................1821.500.000.000.001.50
..TGATGATTCCAAAAGAGA....................................................................................................................................1840.250.000.250.000.00
........................................................................AAATAATTGTCATAATATT.............................................................1930.330.000.330.000.00
...........AAAAAAAGAGATA--------AAATAAT.................................................................................................................2030.330.000.330.000.00
.....................................................................................................................................CAAAGATGATTATATTCAA1920.500.000.500.000.00
....................................AATTAA-------CTTTTTTTTTTGT..........................................................................................1960.170.000.170.000.00
..........CAAAAATAGAGGTA--------AAAC....................................................................................................................1820.500.000.500.000.00
...........AATAACAGAGATA--------AAAAAA..................................................................................................................1940.250.250.000.000.00
..............AACAGAGCAA--------AAACAATT................................................................................................................1820.500.000.000.500.00
...........AAAAGCGGAGATA--------AAACA...................................................................................................................1830.330.000.000.330.00
236 scaffold_180657:4233-4343 + 41.47
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGA----AGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
C-----------------------------------AGTTCGGGACTTTCAACCAGTTTGTAGAATTATTTGCGGAATTAATTGTATGCGGATCAAAGTTTGTATGCCCTTGCTTGTTTTTGTTATA-TCGGCTTATCATCATTTAG
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................................................TGTAGAGTTATTTGCAGAATTAATT................................................................25100.300.000.300.000.00
.............................................................................................CAAAGTTTGTATACCCTTGC..................................20110.180.000.180.000.00
........................................................TTTGTAGAATTATTTxCGGAA......................................................................2021.000.000.000.001.00
............................................................................................TCAAAGTTTGTATACCCTTGC..................................21110.180.000.180.000.00
............................................................TAGAGTTATTTGCAGAATTAA..................................................................21100.100.100.000.000.00
..........................................................TGTAGAGTTATTTGCAGAATTAA..................................................................23100.100.000.100.000.00
..........................................................TGTGGAATTATTTGCGGAATTAATT................................................................2580.130.000.130.000.00
.......................................................GTTTGTGGAACTATTTGCGGAATTAAT.................................................................2780.130.000.130.000.00
............................................................................................TCAAAGTTTGTGTGCCCTTGC..................................2180.130.000.000.130.00
..........................................................TGTGGAACTATTTGCGGAATTAATT................................................................2580.130.000.000.130.00
..............................................................................................AAAGTTTGTATACCCTTGC..................................19110.090.000.090.000.00
...........................................................................................GTCAAAGTTTGTATGCCCTTT...................................2160.170.000.000.170.00
.........................................................TTGTGGAACTATTTGCGGAAT.....................................................................2180.130.130.000.000.00
.........................................................................................GCATCAAAGTTTGTATTCCCT.....................................2170.140.000.140.000.00
.......................................................GTTTGTGGAATTATTTGCGGAATT....................................................................2480.130.000.130.000.00
..........................................................TGTGGAACTATTTGCGGAATTAATTG...............................................................2680.130.000.130.000.00
.............................................................................................CGAAGTTTGTATACCCTTGC..................................20160.060.000.060.000.00
....................................................................................TTTGCGGATxAAAGTTTGT............................................1820.500.000.500.000.00
1503 scaffold_181143:753413-753508 + 41.13
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTT------ATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
C-----------------------------------TATTTCACATTAATTATCTGTGTTTTAAGTTAATAAAAGAGTTAAAGTAACTTACGGAAATTTGCGGATGTGGTTGCAATCTTTAATATACTAAC------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...........................................CATTGATTTTCTGTGTTT........................................................................................18311.330.0010.000.670.67
...................................................................AATAAAAGAGATAAAGCA................................................................1821.500.001.500.000.00
............................................................TTAAGTGAATAAAAGAGCT......................................................................1921.500.001.000.000.50
............................................................TTAAGTGAATAAAAGAGC.......................................................................1821.000.001.000.000.00
.............................................................TAAGTGAATAAAAGAGCT......................................................................1820.500.000.000.000.50
......................................................TGTGTTTTAAGATAATAAAAGTGTT......................................................................2520.500.000.500.000.00
.................................................................................................ATGCGGAAGTGGTTGCAA..................................1820.500.000.500.000.00
............................................................................................GAAATGTGCGGATCTGGT.......................................1820.500.500.000.000.00
...................................................................AATAAAAGAGATAAAGAA................................................................1830.330.000.330.000.00
................................................ATTAACTGTGTTTTAAAT...................................................................................1820.500.000.500.000.00
3098 scaffold_181141:597284-597383 - 41.13
TCCGATG-----------------ACCCA---TGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTC---ACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ACCGGTGTTGCCAAAGATTTAGGTACCCACATTTGCTGGAGAGGA---------------------------CCTGTTTGTGGAGTTATTTACAGAATTAATTGAAAAAAGGGAAGATTTAAGTTTT---------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.....................................................................................TTATTTACAGGATTAACT...............................................................1885.250.001.250.133.88
..............................................................................TGTAGAGTTATTTGCAGAATTAATT...............................................................25100.300.000.300.000.00
...........CAAAGATTCAGGTACCCACATTC....................................................................................................................................2321.000.001.000.000.00
..CGGTGTTGCCAAAGATTCAGGTAC............................................................................................................................................2421.000.000.000.001.00
................................................................................TAGAGTTATTTGCAGAATTAA.................................................................21100.100.100.000.000.00
......................................................................................................TGAAAAAAGAGAAGATTTAAGT..........................................2240.250.250.000.000.00
..........................................................................................TACAGAATTAATTGAAAAAAGAGAAGA.................................................2740.250.000.250.000.00
.......................................................................................................GAAAAAAGAGAGGATTTAAGT..........................................21100.100.000.100.000.00
........................................................................CCTGTTTGTAGAGTTATTTGCAG.......................................................................2380.130.000.000.000.13
...........................................................................................ACAGAATTAATTGAAAAAAGAGAAGAT................................................2740.250.000.250.000.00
..........................................................................TGTTTGTGGAATTATTTACTG.......................................................................21160.060.000.060.000.00
.................................................................................................TTAATTGAAAAAAGAGAGGATTTAAGT..........................................2780.130.000.130.000.00
.........................................................................................TTACAGxATTAATTTAAAAA.........................................................1950.200.000.000.200.00
...........CAAAGATTCAGGTACCCACATTTG...................................................................................................................................2420.500.000.500.000.00
..........................................................................................TACAGAATTAATTGAAAAAAGAGAAG..................................................2640.250.250.000.000.00
........................................................................................................AAAAAAAGGAAGAGTTAAG...........................................1920.500.500.000.000.00
..................................................................................................TAATTGAAAAAAGAGAGG..................................................18100.100.100.000.000.00
......................................................................................TATTTGCAGAATTAATTGAAAAAAGA......................................................2680.130.000.130.000.00
......................................................................................TATTTGCAGAATTAATTGAAAAAAGAGA....................................................2880.130.130.000.000.00
..............................................................................TGTAGAGTTATTTGCAGAATTAA.................................................................23100.100.000.100.000.00
................................................................................................ATTAATTGAAAAAAGAGAGGATTTA.............................................2580.130.000.130.000.00
..................................................................................................TAATTGAAAAAAGAGAGGATTTAAGT..........................................2680.130.000.130.000.00
3315 scaffold_181150:1285706-1285792 - 40.0
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
--------------------GAGGATTTGGTAACTCTCTTG---ATTCAGTATGTACA-TTGAAAATATTGCTTTCATTTATTGCACGCTTATATAATTAATTTTACATTT--------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................................ATTTACA-TTGAAAAGATT.........................................................................18239.500.0035.002.002.50
...................................................ATTTACA-TTGAAAACATT.........................................................................1840.250.000.250.000.00
.................................................................ATATTGCCTTCATTCATT............................................................1820.500.000.500.000.00
.................................................................ATATTGCCTTCATTTATG............................................................1820.500.000.500.000.00
................................................AGTATGxACA-TTGAAAATGT..........................................................................1920.500.000.000.500.00
1654 scaffold_181150:2602643-2602732 + 39.81
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------ATTATTTAAGAAGC-------TTTTTTAAATGTGTGTTAAATGCTTTAAATAATTAAAATTATGACTTTAAATTTATTGTAATATCT----CTTTAATTAC------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......................................................................................................................TAATTAA------------------1820.500.000.500.000.00
.......................................................................................GAATTTAAGTTTATTGTA......................................1820.500.000.500.000.00
............................................................TTAAATGCTTTATATAGT.................................................................1830.330.000.330.000.00
.................................................TTAAAxGTCTGTTAAATGCT..........................................................................1920.500.000.500.000.00
....................................GT-------TTTTTTAATTGTGTGT..................................................................................1830.330.000.330.000.00
2688 scaffold_181096:297703-297790 - 36.88
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCA---CGCGAAGATAT-----TTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
A---------------------------------------------------CCTGTTTGTGGAGTTATTTACAGAATTAATTGAAAAAAGAGAAGATTTAAGTCTTGCTCTCAAGTTTAATTATTTAAAATCCGCGTT------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.................................................................TTATTTACAGGATTAACT....................................................................1885.250.001.250.133.88
..................................................................................TGAGAATAGAGAAGATTTAAGTCT.............................................2422.000.002.000.000.00
..........................................................TGTAGAGTTATTTGCAGAATTAATT....................................................................25100.300.000.300.000.00
......................................................................................AATAGAGAAGATTTAAGTCTT............................................2121.001.000.000.000.00
....................................................................................AGAATAGAGAAGATTTAAGTCTT............................................2321.000.001.000.000.00
................................................................................ATTGAGAATAGAGAAGATTTAAGTCT.............................................2621.000.500.500.000.00
..................................................................................TGAAAAAAGAGAAGATTTAAGT...............................................2240.250.250.000.000.00
...................................................................ATTTGCGGAATTAATTGAAAAAAGAG..........................................................2680.130.000.130.000.00
.......................................................................ACAGAATTAATTGAAAAAAGAGAAGAT.....................................................2740.250.000.250.000.00
.....................................................................TTACAGxATTAATTTAAAAA..............................................................1950.200.000.000.200.00
..................................................................................TGAAAAAAGAGAGGATTTAAGTCTGGC..........................................2760.170.000.170.000.00
...................................................................................GAAAAAAGAGAAGATGGAA.................................................1920.500.500.000.000.00
.................................................................................TTGAGAATAGAGAAGATTTAAGTCT.............................................2520.500.000.500.000.00
...........................................................................................AGAGGATTTAAGTCTGGCTC........................................2080.130.000.130.000.00
....................................................................................AAAAGAGAxAAGATATAAGT...............................................1920.500.000.500.000.00
....................................................CCTGTTTGTAGAGTTATTTGCAG............................................................................2380.130.000.000.000.13
..............................................................................TAATTGAAAAAAGAGAGG.......................................................18100.100.100.000.000.00
..................................................................TATTTGCAGAATTAATTGAAAAAAGA...........................................................2680.130.000.130.000.00
..................................................................................................................AGTTCAATTATTTAAAATCCGCGT.............2420.500.000.500.000.00
.....................................................................................AAAAAGAGAGGATTTAAGT...............................................1940.250.250.000.000.00
..............................................................................TGATTGAAAAAAGAGAGGATTTAAGT...............................................2620.500.000.500.000.00
..........................................................TGTAGAGTTATTTGCAGAATTAA......................................................................23100.100.000.100.000.00
................................................................................ATCGAAAACAGAGAAGAT.....................................................1820.500.000.500.000.00
..............................................................................TAAATGAAGAAAGAGAAG.......................................................1830.330.000.330.000.00
........................................................................................TAGAGAAGATTTAAGTCTT............................................1920.500.000.500.000.00
................................................................................................................TAAGTTCAATTATTTAAAATCCGCGT.............2620.500.000.500.000.00
..............................................................................TAATTGAAAAAGGAGAGGATTTAAG................................................2520.500.000.500.000.00
..................................................................................TGAGAATAGAGAAGATTTAAGTCTT............................................2520.500.000.500.000.00
...................................................................................GAAAAAAGAGAGGATTTAAGT...............................................21100.100.000.100.000.00
......................................................................TACAGAATTAATTGAAAAAAGAGAAG.......................................................2640.250.250.000.000.00
......................................................TGTTTGTGGAATTATTTACTG............................................................................21160.060.000.060.000.00
...........................................................................................AGAGGATTTAAGTCTGGCTCT.......................................2160.170.000.170.000.00
..................................................................TATTTGCAGAATTAATTGAAAAAAGAGA.........................................................2880.130.130.000.000.00
...........................................................................................AGAGGATTTAAGTCTTGCTCTGAAGTT.................................2720.500.000.000.000.50
............................................................................ATTAATTGAAAAAAGAGAGGATTTA..................................................2580.130.000.130.000.00
..............................................................................TAATTGAAAAAAGAGAGGATTTAAGT...............................................2680.130.000.130.000.00
...........................................................................AATTAATTGAGAATAGAGAAGAT.....................................................2320.500.000.500.000.00
..............................................................................TAAATGAAGAAAGAGAAGA......................................................1920.500.500.000.000.00
............................................................................................GAAGATTTAAGTCTTGCCCTCAAG...................................2420.500.000.500.000.00
......................................................................TACAGAATTAATTGAAAAAAGAGAAGA......................................................2740.250.000.250.000.00
..................................................................................TGAAAAAGGAGAGGATTTAAGTCT.............................................2420.500.000.500.000.00
............................................................TAGAGTTATTTGCAGAATTAA......................................................................21100.100.100.000.000.00
.................................................................................................TTTAAGTCTGGCTCTTAAGT..................................2020.500.000.000.000.50
.............................................................................TTAATTGAAAAAAGAGAGGATTTAAGT...............................................2780.130.000.130.000.00
2964 scaffold_181134:926808-926905 - 35.74
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTCAAAAACT--------------------------------------AACTTATAACAGTGAAACAAAACAAAAGAAATAATGCACATATAATTATTTATTTATTTATTTATTTATAAACTAACACAGCAGTCGA-------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................................................................................................GTCAACTAACACAGCAGTCGA-------2132.000.330.331.330.00
.........................................................................................................................TAACACAGCAGTCGA-------1822.500.002.000.000.50
......................................................TAACAGTAAAACAAGACAAAAGAAA................................................................2522.000.002.000.000.00
.........T--------------------------------------AACTTATAACAGTAAAACAAGACAAAA....................................................................2821.000.001.000.000.00
....................................................TATAACAGCAAAACAAAACAAAAGAAA................................................................2721.000.001.000.000.00
....................................................................................................................TCAACTAACACAGCAGTCGA-------2130.670.330.000.000.33
...............................................................................................GTCTATTTATTTATTTATT.............................19100.200.000.100.000.10
....................................................TATAACAGTAAAACAAGACAAAAGAAA................................................................2721.000.001.000.000.00
.......................................................................................................................ACTAACACAGCAGTCGA-------1930.330.000.000.330.00
......................................................................................................................AACTAACACAGCAGTCGA-------2120.500.000.500.000.00
.......................................................AACAGTAAAACAAGACAAAAGAA.................................................................2320.500.000.500.000.00
......................................................................CAAAAGAAATAATTCACATAAAATTATT.............................................2820.500.000.500.000.00
................................................................ACAAAACAAAAGAAATAATGCACATA.....................................................2620.500.000.500.000.00
TTCAAAAACT--------------------------------------AACTTATAACAGTAAA...............................................................................2620.500.000.500.000.00
...............................................................AACAAAACAAAAGAAAACA.............................................................1990.110.000.110.000.00
.....................................................ATTACAGTGAAATAAAAC........................................................................1820.500.000.500.000.00
.......................................................AACAGTAAAACAAGACAAAAGAAATAA.............................................................2720.500.000.500.000.00
...............................................................................................ATCTATTTATTTATTTGTT.............................1950.200.000.200.000.00
............................................................CAAAACAAAACAAAAGAAATAATGCACA.......................................................2820.500.000.500.000.00
..............................................................AAACAAAACAAAAGCAGT...............................................................1830.330.000.330.000.00
.......................................................AACAGTAAAACAAGACAAAAG...................................................................2120.500.000.500.000.00
.........................................................................................................................TAACACAGCAGTCGA-------2020.500.000.500.000.00
..............................................................AAAAAAAACAGAAGAAAT...............................................................18130.080.080.000.000.00
...........................................................GAAAAACAAAACAAAAGAAA................................................................2060.170.000.170.000.00
.......................................................................................................................ACTAACACAGCAGTCGA-------2020.500.000.500.000.00
........................................................................................................................CTAACACAGCAGTCGA-------1920.500.000.000.500.00
...................................................................................................................GTCAACTAACACAGCAGTCG........2030.330.000.330.000.00
......AACT--------------------------------------AACTTATAACAGTAAAACAAGACA.......................................................................2820.500.000.500.000.00
...........................................................................................................................ACACAGCAGTCGA-------2020.500.000.500.000.00
844 scaffold_181071:476750-476838 + 35.46
TCCGATG-----------ACCCATGGCGGGAGAGGATTATGAAAGACAATT--TGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TCTGACCAAAATTTATATACCCTTTTTGCAAGGGTATAATAAAAGTTTTTTTATGAAATTACATATCTGTGCTTAAAATCTCCCAAAAG-------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....................................TAATAAAAGATTTTTAAT......................................................................................................1830.330.000.330.000.00
.......................................TAAAAGTTTATTTATAAA...................................................................................................1830.330.000.330.000.00
649 scaffold_180916:1403280-1403361 + 34.75
TCCGATGACCCAT--GGCGGGAGAGGATTA---TGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ACA-------CTTAGAGAGAGAGAGGT--AAAGCTAAAGGCATCATCTAAGTGGATTTCTGTGTTTAAAATATTCTTAAAAACTAAATTTA---------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................................TGGATTTxTGTGTATAAAAT.............................................................................1920.500.000.000.500.00
...................................................................AAATATTCTGAAAAACTAGA.............................................................2020.500.000.000.000.50
.....................................................GAGTTCTGCGTTTAAAAT.............................................................................1820.500.000.500.000.00
.CA-------TTTAGAGAGAGAGAGT..........................................................................................................................1830.330.000.330.000.00
...............AGAGAGAGAGGT--AAAACT.................................................................................................................1830.330.000.330.000.00
ACA-------CTTxGAGAGAGAGAGAT--.......................................................................................................................1940.250.250.000.000.00
.............AGAGCGAGAGGGGT--AAAGC..................................................................................................................1920.500.500.000.000.00
ACA-------GTTAGAGTGAGAGAG...........................................................................................................................1840.250.000.250.000.00
352 scaffold_180703:1944099-1944184 + 34.75
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TA--------------------------------------------------------TTTAAGATTATTTACGAGATACATTTAATGACATGAAAATCGTTTTTTTTTACGCTACAAAAAAAAAAAACATTTTAACATACA-
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......................................................................................................TTTTTTACGGTxCAAAAAAA....................1930.670.000.670.000.00
.............................................................................GACATTTAATGACATGAC................................................1820.500.000.500.000.00
.............................................................................................AAAGTCGTTTTTTTTTACA...............................1920.500.000.500.000.00
..................................................................................................................CCAAAATAAAAAAACATT...........1880.130.000.000.000.13
..........................................................................................................TTTACGGTAGAAAAAAAA...................1830.330.000.330.000.00
1675 scaffold_181150:3552941-3553015 + 31.91
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T----------------------------GGAAAACTACTTTAAACTAAATATTTCTAGGTCTTTGCATCTATCAGATTCAGACTATGCAAACAAAATTACTT----------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................................................................AGATTTAGACTATGCAAAGA.................................................2020.500.000.000.500.00
...................................................................ATCGATCAGAATCAGACTAT........................................................2020.500.000.000.000.50
...................................................................ATCGATCAGAATCAGACT..........................................................1820.500.000.000.000.50


droVir3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
75 scaffold_291:1622-1745 - 46.81
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------AAAGAATCATTAGATAAATCTTTAAAATATAGATTTTTTTTTACCATATTTGTAATGATTTTTGGATTGCGAAATTTTTTATTTAAATTGTTAATTATATAATATATTAAATATTTATATATAT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
......................................................................GTTATGATTTTTGGTTTGC......................................................1921.000.000.000.000.001.00
...................................................................TTTGTTATGATTTTTGGTTTGC......................................................2221.000.000.000.001.000.00
.........................................................................................................ACTGTTAATGATATAAT.....................1750.200.000.200.000.000.00
.....................................................................TGTTATGATTTTTGGTTTG.......................................................1920.500.500.000.000.000.00
....................................................................TTGTTATGATTTTTGGTTTGC......................................................2120.500.000.000.000.500.00
.....................................................................TGTTATGATTTTTGGTTTGC......................................................2020.500.000.000.000.500.00
...................................................................TTTGTTATGATTTTTGGTTTG.......................................................2120.500.500.000.000.000.00
.........................................................................ATGATTTTTGGATTGTAAAA..................................................2020.500.000.500.000.000.00
53 scaffold_12967:781290-781400 + 40.61
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTGATAATAAATAGCG--CTCGTAATATTAAATACAAATTTACAGTGA-----------TGGCAGTAATTAAC-AATCGATAACATTCTAGGCACTGTAGTTGTT-ACTTATACCTGTGTTACCC-----------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
63 scaffold_13049:347381-347456 + 32.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAA-AAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TCTAAGAATCGATTTAAAATTTAATTTCTAGCCATAGAATTATTTAACTAAATCTGATACACATAAGCATATATA-------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
................................................................ATTATTTxACTAAATCTTA.............................................................1840.250.000.000.250.000.00


droMoj3 - 91 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
210 scaffold_6473:7010400-7010528 + 48.23
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAA-------TTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AAAGACAAAAA-------------AAAATAAAATAAAAAAAATAAACAAACAAAAGTGTGTAAAGAGTGCAAT-GCC-------AACAAATCATACGTAGATTTCTATATTTACATATGTACATAAATATATATATGTATGCACATACAT
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.........AA-------------AAAATAAAATAAAAAAA.............................................................................................................19210.050.000.000.000.05
20 scaffold_1634:507-656 + 45.79
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTT------------GAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
AAGCATAATTCTC---GAGAGAGCTCCACGAGAATCAGCTGCCTTTTTATGCACATACTCTAAGTGCTCGCGGAAAGTTAATCTTGTGTCTATCATGACGCCAAGATACTTTATC--GCCCTCTTTGACGCAATGGTGACGCTGCCGATCTTTAT
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.............................................TTTATGCACATATTCTAAGTGCTCGCGG..................................................................................28295.0021.500.000.0073.50
.................................................TGCACATATTCTAAGTGCTCGCGG..................................................................................24259.503.500.000.0056.00
............C---GAGAGAGCTCTACAAGAATCAGCT...................................................................................................................25250.0024.000.000.0026.00
............C---GAGAGAGCTCTACAAGAATCAGC....................................................................................................................24233.5011.500.000.0022.00
............C---GAGAGAGCTCTACAAGAATCAGCTG..................................................................................................................26220.506.500.000.5013.50
............................................................................................................TCTTATC--GCCCTCTTTGACGCAATGG...................26219.000.500.000.0018.50
............C---GAGAGAGCTCTACAAGAATCAGCTGC.................................................................................................................2728.002.000.500.005.50
..............................................TTATGCACATATTCTAAGTGCTCGCGG..................................................................................2727.501.000.000.006.50
..............................................................................................................TTATC--GCCCTCTTTGACGCAATGGT..................2527.502.000.000.005.50
.................................................TGCACATATTCTAAGTGCTCGCGGA.................................................................................2527.502.500.000.005.00
.........................................................TTCTAAGTGCTCGCGGAAAGTTAATC........................................................................2626.505.000.000.001.50
...............................................TATGCACATATTCTAAGTGCTCGCGG..................................................................................2626.500.500.000.006.00
.............................................TTTATGCACATACTCTAAGTGCTCGCGG..................................................................................2826.501.000.000.005.50
............C---GAGAGAGCTCTACAAGAATCAG.....................................................................................................................2326.004.000.500.001.50
............C---GAGAGAGCTCTACAAGAATCAGCTGCCT...............................................................................................................2925.005.000.000.000.00
.................................................TGCACATACTCTAAGTGCTCGCGG..................................................................................2425.000.000.000.005.00
............................................................................................................TCTTATC--GCCCTCTTTGACGCAATGGT..................2724.000.000.000.004.00
..........................................................TCTAAGTGCTCGCGGAAAGTTAATC........................................................................2523.503.500.000.000.00
..............................................................................................................TTATC--GCCCTCTTTGACGCAATGG...................2423.000.000.000.003.00
.................................................TGCACATATTCTAAGTGCTCGCGGAAAG..............................................................................2823.001.000.000.002.00
...........TC---GAGAGAGCTCTACAAGAATCAGCT...................................................................................................................2623.003.000.000.000.00
.............................................TTTATGCACATATTCTAAGTGCTCGCGGA.................................................................................2922.502.500.000.000.00
............................................................................................................TCTTATC--GCCCTCTTTGACGCAATG....................2522.500.000.000.002.50
.................................................TGCACATATTCTAGGTGCTCGCGG..................................................................................2422.500.000.000.002.50
.AGCATGATTCTC---GAGAGAGCT..................................................................................................................................2122.502.500.000.000.00
............C---GAGAGAGCTCTACAAGAATCAGCTGCC................................................................................................................2822.502.000.500.000.00
..........................................................TCTAAGTGCTCGCGGAAAGTTAATCT.......................................................................2622.002.000.000.000.00
.................................................TGCACATATTCTAAGTGCTCGCGGAA................................................................................2622.000.500.000.001.50
................................................................TGCTCGCGGAAAGTTAATCTTGTGTC.................................................................2622.000.500.000.001.50
.............................................TTTATGCACATATTCTAGGTGCTCGCGG..................................................................................2822.000.500.000.001.50
..............................................................................TAATCTTGTGTCTAACATGACGCC.....................................................2440.750.000.000.000.75
.............................................................AAGTGCTCGCGGAAAGTTAATCTTG.....................................................................2521.500.500.000.001.00
..........................................................TCTAAGTGCTCGCGGAAAGTTAATCTTG.....................................................................2821.501.500.000.000.00
............C---GAGAGAGCTCTACGAGAATCAGC....................................................................................................................2421.500.000.000.001.50
..............................................................................TAATCTTGTGTCTATCATGACA.......................................................2240.750.000.000.000.75
..........................TACAAGAATCAGCTGCCTTTTTATG........................................................................................................2521.500.000.000.001.50
.....................................................CATATTCTAAGTGCTCGCGGAAAGTT............................................................................2621.500.500.000.001.00
..............................................TTATGCACATACTCTAAGTGCTCGCGG..................................................................................2721.500.000.000.001.50
.............................................TTTATGCACATGTTCTAAGTGCTCGCGG..................................................................................2821.500.000.000.001.50
370 scaffold_6500:29858971-29859078 + 43.58
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTAT--AATAACCGGGGTGCCAACATACAT
---------------------------ATAACAGTGATTTTTAAAACATATGTATGTATGTGCAATATCTTAAAAGTTTATACT-ACTAGGCAATATCCGTAAAAAA--TTAAACCTATATGAT----GGAGAGCCAAAATA---
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
27 scaffold_1743:6363-6467 + 41.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------GACAAAGCGGGTCGGTAAATAACAATTATTTATTAAACACCTGACCT-----CTCTTTAAAAGATTGAATATTTTATAATATATATGTATTTGCATGTATATCTATAAT---------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...............................................................................................ATATGTATGTGCGTGTATA.............................19210.050.050.000.000.00
326 scaffold_6500:11807089-11807174 + 36.17
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
-------------------------------------ATTCTAAATTCAAACTCAAAATTTAAAAAAATTTAAAAAATTTAATATAAATAAATTAAGTTGTATACACATTAATACATTTAATA--------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
343 scaffold_6500:19624680-19624759 + 34.31
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAA-------AGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
----------------------------------------------------------------ATTATTTAAATGGTGAAAAATATATTTTAT------ATATTTTTTTTTACAATTGTCTTATTTACAACCAGCATTAAATCATAAAT
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
213 scaffold_6473:9445392-9445466 + 32.62
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
------------------------------------AATTAAAAATAAAATAATTTAATACGACTATATAATATAATTTAATTATACTAAAAATTATTTATTTTTTTAATT--------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...................................................................................................ATTTTTTTAACT--------------------------------16200.050.000.050.000.00
559 scaffold_224:552-634 - 32.55
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACATTTAAACATTATGAT--TACGTTCTGAAAGTTTTATTAAGATTGTACGTCTACATAAGAAATTATTCAACAAATAAATTCC----------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
.........................................AAGATTGTACGTCTACATAAG.................................................................................2160.170.000.000.000.17
........................GTTTTGAAAGTTTCATTAAGATTGT..............................................................................................25440.020.020.000.000.00
............................TGAAAGTTTTATTAAGATTGTACGTC.........................................................................................26130.080.000.000.000.08
............................TGAAAGTTTTATTAAGATTGTACGTCTAC......................................................................................2940.250.250.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTCT........................................................................................27440.020.020.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTC.........................................................................................26440.020.020.000.000.00
49 scaffold_2513:1535-1625 + 31.43
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATT--AATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTGCAGGTCCACCG--------------------TATTTTGAGATTTAATTGCTTGTTGT----TTATTTAAAAGTTTTCTATTTTATTTGAATAAAGATAGTTGCATTTTGGT------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.........................................................................................TTGAATAAAGATAGTTGCATTTTGG...............................2522.001.000.000.001.00
.......................................TTGAGATTTAATTGCTTGTTGT----TT..............................................................................2421.001.000.000.000.00
.........................................................................................TTGAATAAAGATTGTTGCATTTTGGC------------------------------2620.500.500.000.000.00
.......................................TTGAGATTTAATTGCTTGTTGT----TTAT............................................................................2620.500.500.000.000.00
...................................TATTTTGAGATTTAATTGCTTGTTGT----T...............................................................................2720.500.500.000.000.00
.........................................................................................TTGAATAAAGATTGTTGCATTTTGG...............................2520.500.000.000.000.50
.........................................................................................TTGAATAAAGATAGTTGCATTTTGGT------------------------------2620.500.500.000.000.00
......................................................ATGTTGT----TTATTTAAAAA.....................................................................1840.250.000.000.000.25
411 scaffold_6500:32121181-32121276 + 30.72
TCCGATGACCCATGGCGGGAGAGGAT-----TATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
G-----------------------ATTACGCTCTAAAAGTTTCATTAGGATTGTATGTCTACAAAAGAAATTATTCAACAAATAAATATA------------ATATTCTTAATATTGCCCACATTGCAGC------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...............................................................................................................ATATTGCCCACATTGCAGC------------------2150.600.200.200.200.00
..........................................................................................................TCATAATATTGCCCACATTGCAGC------------------2640.250.000.000.000.25
......................................GTTTCATTAGGATTGTACGTC.........................................................................................21240.040.000.000.000.04
...................................AAAGTTTCATTAGGATCGTATGTC.........................................................................................24490.020.020.000.000.00
......................................GTTTCATTAGGATCGTATGTC.........................................................................................21490.020.020.000.000.00
.................................TGAAAGTTTCATTAGGATTGTGTGTC.........................................................................................26330.030.030.000.000.00
............................................................................................................ATAATATTGCCCACATTGCAGC------------------2440.250.000.000.000.25
................................................................................................................TATTGCCCATATTGCAGC------------------2040.250.000.000.250.00
.................................TGAAAGTTTCATTAGGATTGTATATC.........................................................................................26320.030.000.000.000.03
280 scaffold_6496:26370726-26370808 + 30.5
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACACACATTCTTACCATATGACCACTCTAAAAGTTTCATTAAGATCGTATGTCTACAAAAGAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.............................AAAAGTTTCATGAAGATCGTA.............................................................................................21310.260.260.000.000.00
............................TAAAAGTTTCATGAAGATCGT..............................................................................................21300.100.100.000.000.00
...........................CTAAAAGTTTCATGAAGATCGTATG...........................................................................................25220.090.090.000.000.00
...........................CTAAAAGTTTCATGAAGATC................................................................................................20330.060.060.000.000.00
.................................GTTTCATTAGGATCGTATGTC.........................................................................................21490.020.020.000.000.00
...............................AAGTTTCATTAAGATCGTATGTC.........................................................................................23370.030.000.030.000.00
............................TAAAAGTTTCATGAAGATCGTA.............................................................................................22280.040.040.000.000.00
...................................TTCATTAAGATCGTATGCCTACAAAAGAA...............................................................................29310.030.030.000.000.00
..............................AAAGTTTCATTAGGATCGTATGTC.........................................................................................24490.020.020.000.000.00
.........................................AAGATCGTATGTCTACAAAAG.................................................................................21400.030.000.030.000.00
..................................TTTCATTAAGATCGTATGTCTACAA....................................................................................25640.020.020.000.000.00
................................AGTTTCATTAAGATCGTATGT..........................................................................................21370.030.030.000.000.00
............................TAAAAGTTTCATGAAGATCGTATG...........................................................................................24220.050.050.000.000.00
.......................................TTAAGATCGTGTGTCTACAAAAG.................................................................................23410.020.000.000.000.02
.....................................CATTAAGATCGTATGTCTACAAAAGAATT.............................................................................29330.030.030.000.000.00
............................TAAAAGTTTCATGATGATCG...............................................................................................20370.030.030.000.000.00
465 scaffold_6540:10095617-10095696 + 30.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TACATTTAGCCATATG---ATTACGCTCTAAAAGTTTCATTAGGATCGTATGTCTACAAAAGAAATTATTTAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
....TTTAACCATATG---ATTACGCTCTAAA...............................................................................................................2560.170.170.000.000.00
...........ATATG---ATTACGCTCTTAGA..............................................................................................................1960.170.000.000.000.17
.................................GTTTCATTAGGATCGTATGTC.........................................................................................21490.020.020.000.000.00
..........CATATG---ATTACACTCTGAAAGTTT..........................................................................................................24140.070.070.000.000.00
..............................AAAGTTTCATTAGGATCGTATGTC.........................................................................................24490.020.020.000.000.00
..................................TTTCAxTAGGATCGTTTGTCT........................................................................................2080.130.130.000.000.00
............................TAAAAGTTTCATGATGATCG...............................................................................................20370.030.030.000.000.00
..........................TCTGAAAGTTTCATGAGGATCGTATG...........................................................................................26490.020.020.000.000.00
620 scaffold_4366:187-265 - 30.27
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TTTGATTAC--ATTATGATTACGG--TCTGAAAGTTTCTTTAAGATTGTACGTCTAAAAATTAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
.......................................TTAAGATTGTACGTATAGAAATTAAA..............................................................................26180.060.060.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTC.........................................................................................26440.020.020.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTCT........................................................................................27440.020.020.000.000.00
.......................................TTAAGATTGTACGTATAGAAA...................................................................................21200.050.050.000.000.00
............................................ATTGTACGTCTAGAAATTATATTATT.........................................................................26200.050.000.000.000.05
.............................................TTGTACGTCTAGAAATTAAATT............................................................................22190.050.050.000.000.00
329 scaffold_6500:12437396-12437474 + 29.29
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CATTTTAACC----ATATGATTACGCTCTGAAAGTTTCATTAAGATTGTGTATCTACAAAAGAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
........................GTTTTGAAAGTTTCATTAAGATTGT..............................................................................................25440.020.020.000.000.00
...ATTCACC----ATATGATTACGCT....................................................................................................................2060.170.170.000.000.00
.......ACC----ATATGATCACGCTCTGAA...............................................................................................................2180.130.130.000.000.00
...........................TTGAAAGTTTCATTAAGATT................................................................................................20350.030.000.000.000.03
....................TTACGCTCTGAAAGTTTCGTTAAGA..................................................................................................25800.010.010.000.000.00
.....TAAAC----ATATGATTACGCTCTG.................................................................................................................2160.170.170.000.000.00
...TTTAACC----ATATGATTACGCTCTAAA...............................................................................................................2560.170.170.000.000.00
.........C----ATATGATTACACTCTGAAAGTTT..........................................................................................................24140.070.070.000.000.00
......CACC----TTATGATTACGCTCTGAA...............................................................................................................2250.200.200.000.000.00
............................TGAAAGTTTCATTAGGATTGTATATC.........................................................................................26320.030.000.000.000.03
............................TGAAAGTTTCATTAGGATTGTGTGTC.........................................................................................26330.030.030.000.000.00
.......ACC----ATATGATTACGCTCTGAAAGTTT..........................................................................................................2660.170.170.000.000.00
.....TCACC----ATATGATTACGCCCTG.................................................................................................................2150.200.000.200.000.00
..............ATATGATTACGCTCTTAGA..............................................................................................................1960.170.000.000.000.17
374 scaffold_6500:29993756-29993834 + 28.65
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CATTTTAACC----ATATGATTACGCTCTGAAAGTTTCATTAAGATTGTGTGTCTACAAAAGAAATTATTCAAGAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
........................GTTTTGAAAGTTTCATTAAGATTGT..............................................................................................25440.020.020.000.000.00
............................TGAAAGTTTCATTAGGATTGTGCGT..........................................................................................25210.050.050.000.000.00
...ATTCACC----ATATGATTACGCT....................................................................................................................2060.170.170.000.000.00
.......ACC----ATATGATCACGCTCTGAA...............................................................................................................2180.130.130.000.000.00
...........................TTGAAAGTTTCATTAAGATT................................................................................................20350.030.000.000.000.03
.....TAAAC----ATATGATTACGCTCTG.................................................................................................................2160.170.170.000.000.00
...TTTAACC----ATATGATTACGCTCTAAA...............................................................................................................2560.170.170.000.000.00
.........C----ATATGATTACACTCTGAAAGTTT..........................................................................................................24140.070.070.000.000.00
......CACC----TTATGATTACGCTCTGAA...............................................................................................................2250.200.200.000.000.00
............................TGAAAGTTTCATTAGGATTGTGTGTC.........................................................................................26330.030.030.000.000.00
.......................................TTAAGATCGTGTGTCTACAAAAG.................................................................................23410.020.000.000.000.02
.......ACC----ATATGATTACGCTCTGAAAGTTT..........................................................................................................2660.170.170.000.000.00
.....TCACC----ATATGATTACGCCCTG.................................................................................................................2150.200.000.200.000.00
..............ATATGATTACGCTCTTAGA..............................................................................................................1960.170.000.000.000.17
2 scaffold_67:719-795 + 27.92
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
ATTCATCATT-------TGATTACACTCTGAAAGTTTCATTAAGATCTTATGTCTACAAAAGAAATTATTCAACAGATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
......CATA-------TGATTACACTCTGAAAGTTT..........................................................................................................24140.070.070.000.000.00
..........................TCTGGAAGTTTCATTAAGATC................................................................................................21480.020.000.000.020.00
....................TTGCACTCTGGAAGTTTCATT......................................................................................................21220.050.050.000.000.00
893 scaffold_6541:918133-918203 - 27.3
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
CCTTATG------------ATTATGTTTTGAAAGTTTTATTAAGACTGTATGTCTATAAATTAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..............................................TATATGTCTAGAAATTAAATT............................................................................21140.070.070.000.000.00
........................GTTTTGAAAGTTTCATTAAGATTGT..............................................................................................25440.020.020.000.000.00
..................................................................................G------------------------------------------------------------25440.020.020.000.000.00
223 scaffold_6473:16262118-16262173 + 27.17
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TC--------------------------TGAAAGATCAT-TAAGATTGTATATCTACAAAGGAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
704 scaffold_6473:1095005-1095061 - 26.95
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T--------------------------CTGAAAGTTTCATTAAGATTGCATGTCTGCAAATGAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.......................................TTAAxATTGCATGTCTTCAAA...................................................................................2021.001.000.000.000.00
...........................TTGAAAGTTTCATTAAGATT................................................................................................20350.030.000.000.000.03
814 scaffold_6500:11225108-11225177 - 26.87
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
TATGATTAC---------------GTTCTGAAAGTTTCATTAAGATTGTACGTCTACATAAGAAATTATTCAACAGATAAATTTC----------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................TGAAAGTTTCATTAGGATTGTACGTC.........................................................................................26190.210.210.000.000.00
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
...........................TTGAAAGTTTCATTAAGATT................................................................................................20350.030.000.000.000.03
...............................AAGTTTCATTAAGATTGTACGTCTAGC.....................................................................................27190.050.050.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTC.........................................................................................26440.020.020.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTCT........................................................................................27440.020.020.000.000.00
..................................TTTCATTAAGATTGTACGTCTAGA.....................................................................................24190.050.050.000.000.00
.....................................CATTAAGATTGTACGTATAGA.....................................................................................21200.050.000.000.050.00
.............................GAAAGTTTCATTATGATTATACGTC.........................................................................................25250.040.040.000.000.00
........................GTTTTGAAAGTTTCATTAAGATTGT..............................................................................................25440.020.020.000.000.00
.................................GTTTCATTAGGATTGTACGTC.........................................................................................21240.040.000.000.000.04
............................TGAAAGTTTTATTAAGATTGTACGTC.........................................................................................26130.080.000.000.000.08
............................TGAAAGTTTTATTAAGATTGTACGTCTAC......................................................................................2940.250.250.000.000.00
............................TGAAAGTTTCATTAGGATTGTGCGT..........................................................................................25210.050.050.000.000.00
...................................TACATTAAGATTGTACGTA.........................................................................................19160.060.000.000.000.06
..................................TTGCATTAAGATTGTACGTCTAG......................................................................................23190.050.050.000.000.00
.........................................AAGATTGTACGTCTACATAAG.................................................................................2160.170.000.000.000.17
............................TGAAAGTTTCATTAAGATTGTACATC.........................................................................................26120.080.080.000.000.00
290 scaffold_6497:194740-194797 + 26.24
TCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T-------------------------TCTGAAAGTTTCATTAAGATTGTATGTCTAGAAATTAAATTATTCAACAAATAAATT------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..................................TTTCATTAAGATTGTACGTATAGAA....................................................................................25150.130.130.000.000.00
............................TGAAAGTTTCATTAAGATTGTGCGT..........................................................................................25480.040.040.000.000.00
....................................TCATTAAGATTGTACGTATAGAAAT..................................................................................25150.070.070.000.000.00
...........................TTGAAAGTTTCATTAAGATT................................................................................................20350.030.000.000.000.03
............................................ATTGTACGTCTAGAAATTATATTATT.........................................................................26200.050.000.000.000.05
.....................................CATTAAGATTGTACGTATAGA.....................................................................................21200.050.000.000.050.00
..................................TTTCATTAAGATTGTACGTCTAGA.....................................................................................24190.050.050.000.000.00
..................................TTTCATTAAGATTGTACGTCTAGAA....................................................................................25150.070.070.000.000.00
..........................TCTTAAAGTTTCATTGAGATTGTATG...........................................................................................26210.050.000.000.000.05
.......................................TTAAGATTGTACGTATAGAAATTAAA..............................................................................26180.060.060.000.000.00
..................................TTTCATTAAGATTGTACGTATAGAAA...................................................................................26150.070.070.000.000.00
..................................TTGCATTAAGATTGTACGTCTAG......................................................................................23190.050.050.000.000.00
......................................ATTAAGATTGTACGTCTAGAAATTAAA..............................................................................27140.070.070.000.000.00
..............................................TATATGTCTAGAAATTAAATT............................................................................21140.070.070.000.000.00
............................TGAAAGTTTCATTAGGATTGTGTGTC.........................................................................................26330.030.030.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTCT........................................................................................27440.020.020.000.000.00
............................TGAAAGTTTAATTAAGATTGTATGCC.........................................................................................26130.080.000.000.000.08
..................................TTTCATTAAGATTGTAAGTCTAGAAA...................................................................................26340.030.030.000.000.00
.............................................TTGTACGTCTAGAAATTAAATT............................................................................22190.050.050.000.000.00
............................TGAAAGTTTCATTAAGATTGTACGTC.........................................................................................26440.020.020.000.000.00
.......................................TTAAGATTGTACGTATAGAAA...................................................................................21200.050.050.000.000.00
............................TGAAAGTTTCATTAGGATTGTATATC.........................................................................................26320.030.000.000.000.03
...............................AAGTTTCATTAAGATTGTACGTCTAGC.....................................................................................27190.050.050.000.000.00


droGri2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scaffold_14906:12727535-12727642 + 44.16
TCCGATGACCCATGGCGGGAGAGGATTATGA-AAGACAATTTGAA---ATTAAATA-----TCT--GTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACAT
T------------GCCGAGAAGGGAAAACGAGAATACAATTTTGTTATATTATTTAATTTATCTTATCTTGTCCTTTTATTTGAAAGATAATTTGAATTTGAATAAATTTATATTTGTAT----------------------------------
SizeHit CountTotal NormV109
Male body


Generated: 04/20/2012 at 05:40:14 EDT