Possible Orthologs for dme-mir-137

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
22	chr2R:10688339-10688459 -	96.72	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATCAAAAGCG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................................................................TATTGCTTGAGAATACACG.................................. 19 1 1195.00 0.00 896.00 93.00 206.00 ....................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 879.00 240.00 479.00 47.00 113.00 ..............................ACGTGTATGCTCGTAGCTATAAC.................................................................... 23 1 126.00 8.00 70.00 4.00 44.00 ....................................................................TATTGCTTGAGAATACACGTA................................ 21 1 44.00 9.00 32.00 3.00 0.00 ....................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 36.00 0.00 21.00 5.00 10.00 ....................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 19.00 9.00 6.00 0.00 4.00 ....................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 6.00 1.00 5.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 5.00 1.00 4.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 5.00 2.00 1.00 2.00 0.00 ....................................................................TATTGCTTGAGAATACACGT................................. 20 1 5.00 0.00 5.00 0.00 0.00 ..............................ACGTGTATGCTCGTAGCTATA...................................................................... 21 1 4.00 2.00 1.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 4.00 2.00 0.00 2.00 0.00 ....................................................................TATTGCTTGAGAATACACA.................................. 19 1 3.00 0.00 2.00 0.00 1.00 ....................................................................TATTTCTTGAGAATACACG.................................. 19 1 3.00 0.00 3.00 0.00 0.00 .....................................................................ATTGCTTGAGAATACACG.................................. 18 1 3.00 0.00 3.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAGG.............................. 23 1 3.00 0.00 2.00 0.00 1.00 ....................................................................TATTGCTTGAGAATGCACGTAG............................... 22 1 2.00 0.00 1.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACATGTAG............................... 22 1 2.00 1.00 1.00 0.00 0.00 ....................................................................TATTCCTTGAGAATACACG.................................. 19 1 2.00 0.00 0.00 0.00 2.00 ....................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 2.00 2.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACCCG.................................. 19 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTGCTTGAGAATACGCGTAG............................... 22 1 1.00 0.00 1.00 0.00 0.00 .............................CACGTGTATGCTCGTAGCT......................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ....................................................................TATTGCTTGAGAGTACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGCGAATACACGTA................................ 21 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACACGCGG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGATTGAGAATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATAAACG.................................. 19 1 1.00 0.00 0.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACACGG................................. 20 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAAAATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGGATACACGTA................................ 21 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAACACACG.................................. 19 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGAATATACG.................................. 19 2 0.50 0.00 0.50 0.00 0.00 ..............................ACGTGTATGCTCGTAGCTATAACA................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ..............................ATGTGTATGCTCGTAGCTATAAC.................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTTCTTGAGAATACACGTAG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ................................ACGTATGCTCGTAGCTATAAC.................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTGGTTGAGAATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................ACGTGTATGCTxxTAGCTATAAC.................................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTxAGAATACACGTAGG.............................. 22 1 1.00 0.00 1.00 0.00 0.00 ..............................ACGTGTATGCTCxTAGCTATAAC.................................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTACTTGACAATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................ACGTGTATCCTCGTAGCTATAAC.................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTCCTTGAGAATACACGTAG............................... 22 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTGCTTGAGAATACACGTAGAA............................. 24 1 1.00 0.00 1.00 0.00 0.00 ................................................................................ATACACGxAGTTCAACGAGAT.................... 20 1 1.00 0.00 0.00 1.00 0.00 ....................................................................TATTGCTTGGGAATAGACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATCCACG.................................. 19 1 1.00 0.00 1.00 0.00 0.00 ..............................ACGGGTATGCTCGTAGCTATAAC.................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGAATGCACG.................................. 19 1 1.00 0.00 0.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACACGTACC.............................. 23 1 1.00 1.00 0.00 0.00 0.00 ...................................................................TTATTGCTTGAGAATACACG.................................. 20 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TAGTGCGTGAGAATACACGTAGT.............................. 23 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGGTTGAGAATACACG.................................. 19 1 1.00 0.00 1.00 0.00 0.00 ..............................ACGTTTATGCTCGTAGCTA........................................................................ 19 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTAAGAATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATATACGGAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACGCGGAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................ACGTGTATGCTCGTAGCTATAAG.................................................................... 23 1 1.00 1.00 0.00 0.00 0.00 ...................................................................TTATTGCTTGAGAATACACGTA................................ 22 1 1.00 1.00 0.00 0.00 0.00 ......................................................................TATCTTGAGAATACACGTAG............................... 20 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCATGAGAATACACG.................................. 19 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCCTGAGAATACACG.................................. 19 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTGCTTGAGAATACGCG.................................. 19 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTACTTGAGAATACACG.................................. 19 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGAATACACATGG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGGATACACG.................................. 19 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TATTGCTTGGGAATACACG.................................. 19 1 1.00 0.00 0.00 1.00 0.00 .......................................................................TGCTTGxGAATACATGTAGT.............................. 19 1 1.00 1.00 0.00 0.00 0.00 ....................................................................AATTGCTTGAGAATACACGTAG............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..............................ACGTGTAGGCTCGTAGCTATAAC.................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGATTACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGCATACACGGAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................ACGTGTATGCTCGTAGCC......................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ...................................................................CTATTGCTTGAGAATACACGTA................................ 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGAATTCACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................................TATTGCGTGAGAATACACGTAG............................... 22 1 1.00 0.00 1.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
25	super_1:9448872-9448992 -	96.72	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATCAAAAGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ....................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 5116.00 1100.00 1541.00 2475.00 ....................................................................TATTGCTTGAGAATACACGTA................................ 21 1 1049.00 226.00 42.00 781.00 ....................................................................TATTGCTTGAGAATACACGT................................. 20 1 262.00 78.00 8.00 176.00 ....................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 195.00 79.00 52.00 64.00 ....................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 91.00 27.00 22.00 42.00 ..............................ACGTGTATGCTCGTAGCTATAAC.................................................................... 23 1 78.00 5.00 44.00 29.00 ....................................................................TATTGCTTGAGAATACACATAG............................... 22 1 24.00 14.00 2.00 8.00 ....................................................................TATTGCTTGAGAATATACGTAG............................... 22 1 21.00 1.00 15.00 5.00 ....................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 19.00 2.00 9.00 8.00 .....................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 19.00 4.00 5.00 10.00 ....................................................................TATTGCTTGAGAATACACCTAG............................... 22 1 16.00 11.00 3.00 2.00 ......................................................................TTGCTTGAGAATACACGTAG............................... 20 1 16.00 5.00 8.00 3.00 ....................................................................TATTGCTTGAGAATACACGTAGTT............................. 24 1 13.00 5.00 0.00 8.00 ....................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 13.00 4.00 4.00 5.00 ....................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 12.00 5.00 0.00 7.00 ....................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 10.00 2.00 2.00 6.00 ....................................................................TATTGCTTGAGxATACACGTAG............................... 21 1 10.00 0.00 10.00 0.00 ....................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 9.00 1.00 3.00 5.00 ....................................................................TATTGCTTGAGAATACATGTAG............................... 22 1 8.00 1.00 4.00 3.00 ....................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 8.00 3.00 0.00 5.00 ....................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 7.00 1.00 2.00 4.00 ....................................................................TATTGCTTGGGAATACACGTAG............................... 22 1 7.00 1.00 3.00 3.00 ..............................ACGTGTATGCTCGTAGCTATA...................................................................... 21 1 7.00 0.00 4.00 3.00 ....................................................................GATTGCTTGAGAATACACGTAG............................... 22 1 6.00 1.00 5.00 0.00 ....................................................................TATTGCTCGAGAATACACGTAG............................... 22 1 6.00 2.00 2.00 2.00 ....................................................................TCTTGCTTGAGAATACACGTAG............................... 22 1 6.00 0.00 5.00 1.00 ....................................................................TATTGCTTGAGAATACGCGTAG............................... 22 1 6.00 0.00 2.00 4.00 ....................................................................TATTGCTTGAGAGTACACGTAG............................... 22 1 6.00 3.00 3.00 0.00 ....................................................................TACTGCTTGAGAATACACGTAG............................... 22 1 6.00 2.00 2.00 2.00 ....................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 6.00 2.00 1.00 3.00 ....................................................................TATTGCTTGAGAATACACGTAGAT............................. 24 1 5.00 3.00 0.00 2.00 ..............................ACGTGTATGCTCGTAGCTATAA..................................................................... 22 1 5.00 3.00 2.00 0.00 ....................................................................TATTGCTTGAGAATACACATA................................ 21 1 5.00 2.00 0.00 3.00 ....................................................................TATTGCTTGAGAATACACG.................................. 19 1 4.00 0.00 0.00 4.00 ....................................................................TATTTCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 0.00 4.00 ....................................................................TATTGCTTGAGAATACACGTAGAA............................. 24 1 4.00 0.00 2.00 2.00 ....................................................................TGTTGCTTGAGAATACACGTAG............................... 22 1 4.00 2.00 1.00 1.00 ....................................................................CATTGCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 1.00 3.00 ....................................................................TATTCCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 2.00 2.00 ....................................................................TATTGCTTGAGAATACACGTT................................ 21 1 4.00 3.00 0.00 1.00 ....................................................................TATTGCTTGAGAATTCACGTAG............................... 22 1 4.00 0.00 4.00 0.00 .......................................................................TGCTTGAGAATACACGTAG............................... 19 1 3.00 0.00 1.00 2.00 ....................................................................TATCGCTTGAGAATACACGTAG............................... 22 1 3.00 1.00 0.00 2.00 ....................................................................TATTGCTTGAGACTACACGTAG............................... 22 1 3.00 2.00 1.00 0.00 ....................................................................TATTGCTTGAGAATGCACGTA................................ 21 1 3.00 1.00 0.00 2.00 ......................................................................TTGCTTGAGAATACACGTAGT.............................. 21 1 3.00 0.00 2.00 1.00 ....................................................................TATTGCTTGATAATACACGTAG............................... 22 1 3.00 1.00 0.00 2.00 ....................................................................TATTGCTTGAGAATGCACGTAG............................... 22 1 3.00 1.00 2.00 0.00 ..............................ACGTGTATGCTCGTAGCTA........................................................................ 19 1 3.00 0.00 0.00 3.00 ....................................................................TATTGATTGAGAATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 ....................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 3.00 ....................................................................TATTGCTTGAGAATACACGAAG............................... 22 1 3.00 0.00 0.00 3.00 ....................................................................TATTGCTTGTGAATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 ....................................................................TATTGCTTGAAAATACACGTA................................ 21 1 3.00 0.00 0.00 3.00 ....................................................................TATTGCTTGAGAATACCCGTAG............................... 22 1 3.00 0.00 1.00 2.00 ....................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 3.00 0.00 2.00 1.00 ....................................................................TATTGCCTGAGAATACACGTAG............................... 22 1 3.00 1.00 2.00 0.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
7	chr2R:17032219-17032325 +	76.54	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG C-------------CCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGACATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATTAAAAAAG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ....................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 1894.00 158.00 345.00 442.00 851.00 98.00 ....................................................................TATTGCTTGAGAATACACGTA................................ 21 1 369.00 6.00 67.00 74.00 218.00 4.00 ....................................................................TATTGCTTGAGAATACACG.................................. 19 1 192.00 0.00 0.00 0.00 0.00 192.00 ....................................................................TATTGCTTGAGAATACACGT................................. 20 1 98.00 0.00 18.00 27.00 52.00 1.00 ....................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 46.00 5.00 8.00 13.00 19.00 1.00 ..............................ACGTGTATGCTCGTAGCTATAAC.................................................................... 23 1 37.00 17.00 1.00 0.00 4.00 15.00 ....................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 20.00 0.00 5.00 1.00 14.00 0.00 ....................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 13.00 0.00 2.00 0.00 11.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 13.00 3.00 3.00 0.00 7.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 11.00 0.00 3.00 1.00 5.00 2.00 ....................................................................TATTGCTTGAGAATACCCGTAG............................... 22 1 10.00 1.00 1.00 0.00 8.00 0.00 ....................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 9.00 0.00 5.00 0.00 4.00 0.00 ..............................ACGTGTATGCTCGTAGCTAT....................................................................... 20 1 8.00 0.00 3.00 0.00 5.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 7.00 0.00 0.00 2.00 4.00 1.00 .....................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 7.00 0.00 2.00 1.00 4.00 0.00 ....................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 6.00 0.00 0.00 3.00 3.00 0.00 ....................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 5.00 0.00 2.00 0.00 3.00 0.00 ....................................................................TATTGCTTGAGAATACACGTT................................ 21 1 5.00 0.00 0.00 1.00 4.00 0.00 ...................................................................TTATTGCTTGAGAATACACGT................................. 21 1 5.00 0.00 1.00 0.00 4.00 0.00 ....................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 5.00 0.00 0.00 0.00 5.00 0.00 ....................................................................TATTGCTTGAGAATACACATAG............................... 22 1 5.00 0.00 3.00 0.00 2.00 0.00 ......................................................................TTGCTTGAGAATACACGTAG............................... 20 1 5.00 0.00 1.00 3.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACACCTAG............................... 22 1 4.00 1.00 0.00 0.00 3.00 0.00 ....................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 4.00 0.00 2.00 1.00 1.00 0.00 ....................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 4.00 0.00 0.00 2.00 2.00 0.00 ....................................................................TATTGCTTGAGAATACACGTTG............................... 22 1 4.00 0.00 1.00 0.00 3.00 0.00 ....................................................................TATTGCTTGCGAATACACGTAG............................... 22 1 4.00 0.00 1.00 0.00 3.00 0.00 ....................................................................TATTGCCTGAGAATACACGTAG............................... 22 1 4.00 0.00 2.00 1.00 1.00 0.00 ....................................................................TATTGCTTGAGACTACACGTA................................ 21 1 4.00 0.00 0.00 0.00 4.00 0.00 ....................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 4.00 0.00 0.00 1.00 3.00 0.00 ....................................................................TATTGCTTGAGAATACGCGTAG............................... 22 1 3.00 0.00 2.00 0.00 0.00 1.00 ...................................................................TTATTGCTTGAGAATACACGTAG............................... 23 1 3.00 0.00 1.00 0.00 2.00 0.00 ....................................................................TATTGATTGAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ....................................................................TATTGCTTGATAATACACGTAG............................... 22 1 3.00 0.00 1.00 1.00 1.00 0.00 ....................................................................TATTGCTTGAGAATACACGTC................................ 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ..............................ACGTGTATGCTCGTAGCTATAA..................................................................... 22 1 3.00 1.00 0.00 0.00 1.00 1.00 ....................................................................TATTGCTTGAGTATACACGTAG............................... 22 1 3.00 1.00 0.00 0.00 2.00 0.00 ....................................................................CATTGCTTGAGAATACACGTAG............................... 22 1 3.00 0.00 2.00 1.00 0.00 0.00 ....................................................................TATTGCTTGAGAATCCACGTA................................ 21 1 3.00 0.00 0.00 2.00 1.00 0.00 ....................................................................TATTGCTTGAGAATAAACGTAG............................... 22 1 3.00 1.00 1.00 0.00 1.00 0.00 ....................................................................TATTGCTTGAGAATGCACGTAG............................... 22 1 3.00 1.00 1.00 0.00 1.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4845:13905048-13905167 +	92.61	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTACGGTGGCGACTCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGACATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATCAAAGGGG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ....................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 4977.00 252.00 598.00 0.00 4127.00 ....................................................................TATTGCTTGAGAATACACGTA................................ 21 1 1037.00 2.00 113.00 0.00 922.00 ....................................................................TATTGCTTGAGAATACACGT................................. 20 1 240.00 1.00 34.00 0.00 205.00 ..............................ACGTGTATGCTCGTAGCTATAAC.................................................................... 23 1 95.00 18.00 7.00 0.00 70.00 ....................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 70.00 6.00 8.00 0.00 56.00 ....................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 57.00 10.00 6.00 0.00 41.00 ....................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 54.00 0.00 12.00 0.00 42.00 ....................................................................TATTGCTTGATAATACACGTAG............................... 22 1 39.00 2.00 1.00 0.00 36.00 ....................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 37.00 2.00 1.00 0.00 34.00 .....................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 33.00 1.00 5.00 0.00 27.00 ....................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 32.00 1.00 3.00 0.00 28.00 ....................................................................TATTTCTTGAGAATACACGTAG............................... 22 1 24.00 3.00 0.00 0.00 21.00 ....................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 23.00 0.00 5.00 0.00 18.00 ..............................ACGTGTATGCTCGTAGCTATA...................................................................... 21 1 19.00 6.00 0.00 0.00 13.00 ....................................................................TATTGCTTGAGAATACAAGTAG............................... 22 1 15.00 0.00 1.00 0.00 14.00 ....................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 13.00 2.00 2.00 0.00 9.00 ....................................................................TATTGATTGAGAATACACGTAG............................... 22 1 13.00 0.00 1.00 0.00 12.00 ......................................................................TTGCTTGAGAATACACGTAG............................... 20 1 11.00 0.00 0.00 0.00 11.00 ....................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 10.00 0.00 2.00 0.00 8.00 ....................................................................TATTGCTTGAGAATACCCGTAG............................... 22 1 9.00 0.00 3.00 0.00 6.00 ...................................................................TTATTGCTTGAGAATACACGTAG............................... 23 1 9.00 0.00 1.00 0.00 8.00 ....................................................................TACTGCTTGAGAATACACGTAG............................... 22 1 9.00 0.00 1.00 0.00 8.00 ....................................................................TATTGCTTGAGAATACACCTAG............................... 22 1 8.00 0.00 2.00 0.00 6.00 ....................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 8.00 1.00 2.00 0.00 5.00 ....................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 8.00 1.00 1.00 0.00 6.00 ....................................................................TATTGCTTGAGAATAAACGTAG............................... 22 1 8.00 0.00 0.00 0.00 8.00 ....................................................................TATTGCTTGAGAATACATGTAG............................... 22 1 8.00 1.00 0.00 0.00 7.00 ....................................................................TATTGCTTGAGAGTACACGTAG............................... 22 1 8.00 1.00 1.00 0.00 6.00 ....................................................................TATTGCTTGAAAATACACGTAG............................... 22 1 7.00 1.00 1.00 0.00 5.00 ....................................................................TATTGATTGAGAATACACGTA................................ 21 1 7.00 0.00 0.00 0.00 7.00 ....................................................................TATTGCTTTAGAATACACGTA................................ 21 1 7.00 0.00 0.00 0.00 7.00 ....................................................................TATTGCTTGAGAATACACTTA................................ 21 1 7.00 0.00 1.00 0.00 6.00 ....................................................................TATTCCTTGAGAATACACGTAG............................... 22 1 6.00 0.00 1.00 0.00 5.00 ....................................................................TATTGCTCGAGAATACACGTAG............................... 22 1 6.00 1.00 1.00 0.00 4.00 ....................................................................TATTGCTTGAGAACACACGTAG............................... 22 1 6.00 0.00 0.00 0.00 6.00 ..............................ACGTGTATGCTCGTAGCTAT....................................................................... 20 1 6.00 0.00 1.00 0.00 5.00 ....................................................................TATTGCTTGGGAATACACGTAG............................... 22 1 6.00 0.00 0.00 0.00 6.00 ....................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 6.00 0.00 4.00 0.00 2.00 ....................................................................TATCGCTTGAGAATACACGTAG............................... 22 1 6.00 0.00 0.00 0.00 6.00 ..............................ACGTGTATGCTCGTAGCTA........................................................................ 19 1 6.00 0.00 0.00 0.00 6.00 ....................................................................TATTGCTTGATAATACACGTA................................ 21 1 6.00 0.00 0.00 0.00 6.00 ....................................................................TAGTGCTTGAGAATACACGTAG............................... 22 1 5.00 0.00 0.00 0.00 5.00 ....................................................................TATTGATTGAGAATACACGT................................. 20 1 5.00 0.00 0.00 0.00 5.00 ....................................................................TATTGCTTGAGGATACACGTA................................ 21 1 5.00 0.00 2.00 0.00 3.00 ....................................................................TATTGCCTGAGAATACACGTAG............................... 22 1 5.00 0.00 0.00 0.00 5.00 ....................................................................TATTTCTTGAGAATACACGTA................................ 21 1 5.00 0.00 0.00 0.00 5.00 ....................................................................GATTGCTTGAGAATACACGTAG............................... 22 1 5.00 0.00 0.00 0.00 5.00 ....................................................................TATTGCTTGAGAATACACG.................................. 19 1 5.00 0.00 2.00 0.00 3.00 ....................................................................TATTGCTTGACAATACACGTAG............................... 22 1 5.00 2.00 1.00 0.00 2.00 ....................................................................TAATGCTTGAGAATACACGTAG............................... 22 1 5.00 0.00 0.00 0.00 5.00 ....................................................................TATTGCTTGAGAATCCACGTAG............................... 22 1 4.00 2.00 0.00 0.00 2.00 ....................................................................TATTGCTTCAGAATACACGTAG............................... 22 1 4.00 3.00 0.00 0.00 1.00 ....................................................................TATTGCTTGAGAATACACGTG................................ 21 1 4.00 0.00 0.00 0.00 4.00 .....................................................................ATTGCTTGAGAATACACGTAGT.............................. 22 1 4.00 2.00 0.00 0.00 2.00 ....................................................................TATTGCTTGAGAATACACGCA................................ 21 1 4.00 0.00 3.00 0.00 1.00 ....................................................................TATTGCTTGAGAATAAACGTA................................ 21 1 4.00 0.00 0.00 0.00 4.00 ....................................................................CATTGCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 0.00 0.00 4.00 ....................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 4.00 0.00 1.00 0.00 3.00 ........................................................................GCTTGAGAATACACGTAG............................... 18 1 4.00 0.00 0.00 0.00 4.00 ....................................................................TATTGCTTGAGAATATACGTAG............................... 22 1 4.00 0.00 1.00 0.00 3.00 ....................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 4.00 0.00 2.00 0.00 2.00 ....................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 4.00 0.00 2.00 0.00 2.00 ....................................................................TATTGCTTGAGAATCCACGTA................................ 21 1 3.00 0.00 0.00 0.00 3.00 ....................................................................TATTGCTTGAGAATATACGTA................................ 21 1 3.00 0.00 1.00 0.00 2.00 ....................................................................TATTGCTTAAGAATACACGTAG............................... 22 1 3.00 1.00 1.00 0.00 1.00 ....................................................................TATTGCTTGTGAATACACGTAG............................... 22 1 3.00 0.00 1.00 0.00 2.00 ...................................................................TTATTGCTTGAGAATACACG.................................. 20 1 3.00 0.00 0.00 0.00 3.00 ....................................................................TATTGCTTGCGAATACACGTAG............................... 22 1 3.00 0.00 1.00 0.00 2.00 ....................................................................TATTxCTTGAGAATACACGTAG............................... 21 1 3.00 0.00 0.00 0.00 3.00 ....................................................................TATTGCTTxAGAATACACGTAG............................... 21 1 3.00 0.00 0.00 0.00 3.00 ...................................................................CTATTGCTTGAGAATACACGTA................................ 22 1 3.00 0.00 1.00 0.00 2.00 ....................................................................TATTGCTTGAGxATACACGTAG............................... 21 1 3.00 0.00 0.00 0.00 3.00 ....................................................................TATGGCTTGAGAATACACGTAG............................... 22 1 3.00 0.00 1.00 0.00 2.00 ....................................................................TATTGCTTGAGAATACACGTAGAA............................. 24 1 3.00 0.00 1.00 0.00 2.00 ....................................................................TATTGCTCGAGAATACACGTA................................ 21 1 3.00 0.00 0.00 0.00 3.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453948:1198602-1198734 -	70.11	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG------------- TTACAGTGGCAGAAGCTATCTCCAATGGCCACGTGTATGCTCGTAGCTATAGCCTGATATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCAGCGAGATTTGTTCAGCAATCAAGCGCGACACTACTGACAA Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409672:857315-857459 -	60.71	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAAT-------------------------AAAAAGAG TTAAATGGTCGACGGCAATCTCCAATGGCCACGTGTATACTCGTAGCGATAACCTGATATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATCAAACCAAGCCACTGAAAGCTATAAAAAAACTG Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000301506:2893843-2893998 -	52.96	TTACGATGGC----------GTCG-CCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAA-------------------------TAAAAAGAG TTAAAGTGGCCATCTCAACCGCAGCCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCCACGAGATTTGCCCAGCAATTAAAACGGTCACCGAATGGGGCGATAAAAACAG Size Hit Count Total Norm

droTak1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415795:609483-609612 +	75.47	TTACGATGGCGTCG------CCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAA-AGAG--- TCAACGTGGCGACGGCCACCTCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATATCCG-ATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATCAAACGGAGCCA Size Hit Count Total Norm
2	scf7180000415795:610873-610892 +	9.24	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAC----------------------------------------------------------------------------------------------------TTGGGAAGTAAAAAGG- Size Hit Count Total Norm		None

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000491107:959925-960044 -	89.33	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAAAGTGGCGACGGCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCAGCGAGATTTGTTCAGCAATCAAACGGA Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779911:146905-147024 +	88.51	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAAAGTGGCGACGGCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATATCCA-ATGTTATTGCTTGAGAATACACGTAGTTCAGTGAGATTTGTTCAGCAATGAAACGTA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302476:2644168-2644293 -	71.89	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATA------------AAAAGAG CTATAA--------GCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATATCCGAAATGTTATTGCTTGAGAATACACGTAGTTCAGCGAGATTCGTTCATCAATCCAAACGGAAATCGAAAGTG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_13266:15447223-15447345 +	81.8	TTACGATGGCG-TCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAAAGTGGCAACCTGGAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACGTGAAATGCGAAATGTTATTGCTTGAGAATACACGTAGTTCAGAGAGATTTGTTCAGCAATCGAAGTGG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ......................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 2478.00 512.00 1289.00 637.00 40.00 ......................................................................TATTGCTTGAGAATACACGTA................................ 21 1 418.00 85.00 214.00 117.00 2.00 ......................................................................TATTGCTTGAGAATACACGT................................. 20 1 191.00 50.00 78.00 63.00 0.00 ......................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 104.00 38.00 45.00 18.00 3.00 ...............................ACGTGTATGCTCGTAGCTATAAC..................................................................... 23 1 50.00 2.00 42.00 4.00 2.00 .......................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 44.00 6.00 24.00 14.00 0.00 ......................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 41.00 10.00 23.00 7.00 1.00 ......................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 24.00 2.00 12.00 9.00 1.00 ......................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 12.00 3.00 5.00 4.00 0.00 ......................................................................TATTGCTTGAGAATACACGTT................................ 21 1 11.00 1.00 8.00 2.00 0.00 ......................................................................TATTTCTTGAGAATACACGTAG............................... 22 1 11.00 4.00 6.00 1.00 0.00 .......................................................................ATTGCTTGAGAATACACGT................................. 19 1 11.00 2.00 7.00 2.00 0.00 ......................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 11.00 0.00 8.00 3.00 0.00 ......................................................................TAGTGCTTGAGAATACACGTAG............................... 22 1 10.00 0.00 10.00 0.00 0.00 ......................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 9.00 3.00 3.00 2.00 1.00 ......................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 9.00 1.00 0.00 7.00 1.00 .....................................................................TTATTGCTTGAGAATACACGT................................. 21 1 8.00 3.00 2.00 3.00 0.00 ......................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 7.00 1.00 4.00 2.00 0.00 ......................................................................TATTGCTTGATAATACACGTAG............................... 22 1 7.00 0.00 7.00 0.00 0.00 ......................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 7.00 4.00 2.00 1.00 0.00 ......................................................................TATTGCTTGAGAATACACG.................................. 19 1 7.00 2.00 2.00 3.00 0.00 ......................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 6.00 1.00 5.00 0.00 0.00 ......................................................................TATTGCTTGGGAATACACGTAG............................... 22 1 5.00 2.00 2.00 1.00 0.00 ......................................................................TACTGCTTGAGAATACACGTAG............................... 22 1 5.00 0.00 4.00 1.00 0.00 ......................................................................TATTGCTTGAGAATACACATAG............................... 22 1 5.00 0.00 3.00 2.00 0.00 ...............................ACGTGTATGCTCGTAGCTATA....................................................................... 21 1 5.00 0.00 3.00 1.00 1.00 ......................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 5.00 0.00 0.00 4.00 1.00 ......................................................................TATTGATTGAGAATACACGTAG............................... 22 1 5.00 0.00 3.00 2.00 0.00 .....................................................................TTATTGCTTGAGAATACACGTA................................ 22 1 5.00 1.00 4.00 0.00 0.00 ......................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 5.00 0.00 1.00 4.00 0.00 ......................................................................GATTGCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 1.00 2.00 1.00 ...............................ACGTGTATGCTCGTAGCTATAA...................................................................... 22 1 4.00 0.00 4.00 0.00 0.00 ........................................................................TTGCTTGAGAATACACGTAGTT............................. 22 1 4.00 0.00 3.00 0.00 1.00 ......................................................................TATTGCTTGAGAATACACGTAGTT............................. 24 1 4.00 2.00 0.00 2.00 0.00 ......................................................................TATGGCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 0.00 4.00 0.00 ......................................................................TATTGCTTGAAAATACACGTAG............................... 22 1 4.00 1.00 3.00 0.00 0.00 ......................................................................TATTGATTGAGAATACACGTA................................ 21 1 4.00 0.00 3.00 1.00 0.00 ......................................................................TATCGCTTGAGAATACACGTAG............................... 22 1 4.00 1.00 1.00 2.00 0.00 .....................................................................TTATTGCTTGAGAATACACGTAG............................... 23 1 4.00 0.00 3.00 1.00 0.00 ......................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 4.00 1.00 0.00 3.00 0.00 ......................................................................TATTGCTTGAGATTACACGTAG............................... 22 1 3.00 2.00 0.00 1.00 0.00 ......................................................................TAGTGCTTGAGAATACACGTAT............................... 22 1 3.00 0.00 2.00 1.00 0.00 ......................................................................TATTGCTTGAGAATATACGTAG............................... 22 1 3.00 3.00 0.00 0.00 0.00 ......................................................................TATTGCTTGAGAATACTCGTAG............................... 22 1 3.00 0.00 0.00 3.00 0.00 ......................................................................TATTGCTTGAGAATACACGTATT.............................. 23 1 3.00 0.00 3.00 0.00 0.00 ......................................................................TATTGCTTGAGAATACGCGTAG............................... 22 1 3.00 0.00 3.00 0.00 0.00 ......................................................................TATTGCTTGAGAGTACACGTAG............................... 22 1 3.00 1.00 2.00 0.00 0.00 ......................................................................TAGTGCTTGAGAATACACGTA................................ 21 1 3.00 0.00 2.00 1.00 0.00 .......................................................................ATTGCTTGAGAATACACGTA................................ 20 1 3.00 1.00 2.00 0.00 0.00 ......................................................................TATTGCTTGAGAATACACGTTG............................... 22 1 3.00 2.00 1.00 0.00 0.00 ......................................................................TATTGCTTCAGAATACACGTAG............................... 22 1 3.00 0.00 3.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396547:1600307-1600426 -	83.72	TTACGATGGC-GTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAAAGTGGCAATCTGAAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACGTGATGTGCGAATGTTATTGCTTGAGAATACACGTAGTTCAGTGAGATTTGTTCAGCAATCGAAAG-- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr3:16385856-16386036 -	37.78	TTACGATGGCGTCGCC---------------------------AATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAA---------------------------------AGAG TTAAGATGACAGCGACGGCCAAGGCAATGCCGACGGCGACTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATATCCGAATGTTATTGCTTGAGAATACACGTAGTTTAACAAGATTCGTTCAGCAATCAAACTGAAACGGAAAGTGTCTGTGAAAGGTGTCCTTAAAG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ...............................................................................................TATTGCTTGAGAATACACGTAG................................................................ 22 1 1545.00 340.00 437.00 767.00 1.00 ...............................................................................................TATTGCTTGAGAATACACGTA................................................................. 21 1 186.00 47.00 14.00 125.00 0.00 .........................................................ACGTGTATACTCATAGCTATAAC..................................................................................................... 23 1 87.00 0.00 82.00 5.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGT.................................................................. 20 1 73.00 12.00 1.00 60.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGTAGT............................................................... 23 1 41.00 14.00 11.00 16.00 0.00 ................................................................................................ATTGCTTGAGAATACACGTA................................................................. 20 1 20.00 6.00 0.00 14.00 0.00 ................................................................................................ATTGCTTGAGAATACACGTAGT............................................................... 22 1 20.00 1.00 5.00 14.00 0.00 ........................................................CACGTGTATACTCATAGCTATAA...................................................................................................... 23 1 13.00 3.00 8.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGCAG................................................................ 22 1 9.00 0.00 1.00 8.00 0.00 ................................................................................................ATTGCTTGAGAATACACGTAG................................................................ 21 1 9.00 2.00 2.00 5.00 0.00 ................................................................................................ATTGCTTGAGAATACACGT.................................................................. 19 1 8.00 1.00 0.00 7.00 0.00 ...............................................................................................TAGTGCTTGAGAATACACGTAG................................................................ 22 1 6.00 0.00 1.00 5.00 0.00 ...............................................................................................TATTGCTTGAGAATACCCGTAG................................................................ 22 1 5.00 1.00 1.00 3.00 0.00 .........................................................ACGTGTATACTCATAGCTATAA...................................................................................................... 22 1 5.00 0.00 4.00 1.00 0.00 .........................................................ACGTGTATACTCATAGCTATA....................................................................................................... 21 1 5.00 0.00 3.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGTAT................................................................ 22 1 5.00 2.00 0.00 3.00 0.00 ...............................................................................................TATTGATTGAGAATACACGTAG................................................................ 22 1 4.00 0.00 4.00 0.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGTAGC............................................................... 23 1 4.00 0.00 2.00 2.00 0.00 ...............................................................................................TATTGCTTTAGAATACACGTAG................................................................ 22 1 4.00 1.00 1.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATACACG................................................................... 19 1 4.00 0.00 0.00 3.00 1.00 ........................................................CACGTGTATACTCATAGCTATA....................................................................................................... 22 1 4.00 0.00 4.00 0.00 0.00 .................................................................................................TTGCTTGAGAATACACGTAGTT.............................................................. 22 1 4.00 2.00 1.00 1.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGTCG................................................................ 22 1 4.00 0.00 2.00 2.00 0.00 ..............................................................................................CTATTGCTTGAGAATACACGTAG................................................................ 23 1 4.00 0.00 4.00 0.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGTAGA............................................................... 23 1 4.00 0.00 2.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATGCACGTAG................................................................ 22 1 3.00 1.00 0.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATACACGCA................................................................. 21 1 3.00 0.00 1.00 2.00 0.00 ...............................................................................................TATTGCTTGAGGATACACGTAG................................................................ 22 1 3.00 0.00 0.00 3.00 0.00 ...............................................................................................TATTGCTTGTGAATACACGTAG................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ...............................................................................................TATTGCTTGAGACTACACGTAG................................................................ 22 1 3.00 1.00 2.00 0.00 0.00 ...............................................................................................TATTGCTTGAGAATACAAGTAG................................................................ 22 1 3.00 0.00 0.00 3.00 0.00 .................................................................................................TTGCTTGAGAATACACGTAG................................................................ 20 1 3.00 1.00 0.00 2.00 0.00 ...............................................................................................TATTGCTTGAGAATACGCGTAG................................................................ 22 1 3.00 0.00 1.00 2.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_4:376928-377074 +	52.38	TTACGATGGCGTCGCC--------------------------------AATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTAAGATGACAGCGACGGCCACGCCACGGCAATGCCGACGGCGACTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATATCCGAATGTTATTGCTTGAGAATACACGTAGTTTAACAAGATTCGTTCAGCAATCA------ Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ....................................................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 1823.00 302.00 89.00 638.00 770.00 24.00 ....................................................................................................TATTGCTTGAGAATACACGTA................................ 21 1 370.00 20.00 2.00 147.00 201.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGT................................. 20 1 161.00 7.00 2.00 64.00 88.00 0.00 ....................................................................................................TATTGCTTGAGAATACACG.................................. 19 1 66.00 0.00 0.00 1.00 3.00 62.00 ....................................................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 53.00 11.00 1.00 19.00 22.00 0.00 .....................................................................................................ATTGCTTGAGAATACACGTA................................ 20 1 36.00 2.00 0.00 16.00 18.00 0.00 .....................................................................................................ATTGCTTGAGAATACACGT................................. 19 1 20.00 0.00 0.00 7.00 13.00 0.00 .....................................................................................................ATTGCTTGAGAATACACGTAGT.............................. 22 1 17.00 0.00 0.00 12.00 5.00 0.00 ..............................................................ACGTGTATACTCATAGCTATAAC.................................................................... 23 1 16.00 0.00 5.00 2.00 0.00 9.00 ....................................................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 16.00 0.00 0.00 8.00 8.00 0.00 .............................................................CACGTGTATACTCATAGCTATAA..................................................................... 23 1 16.00 0.00 1.00 5.00 7.00 3.00 ....................................................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 14.00 0.00 0.00 4.00 8.00 2.00 .....................................................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 13.00 0.00 1.00 4.00 8.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 12.00 1.00 0.00 6.00 5.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 8.00 0.00 0.00 5.00 3.00 0.00 ...................................................................................................TTATTGCTTGAGAATACACGTAG............................... 23 1 8.00 1.00 0.00 0.00 7.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 8.00 0.00 0.00 0.00 8.00 0.00 ....................................................................................................TATTGCTTGAGAATACACCTAG............................... 22 1 7.00 0.00 0.00 2.00 5.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 7.00 0.00 1.00 4.00 2.00 0.00 ....................................................................................................TATTGATTGAGAATACACGTAG............................... 22 1 7.00 1.00 0.00 5.00 1.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 7.00 0.00 0.00 1.00 6.00 0.00 .............................................................CACGTGTATACTCATAGCTAT....................................................................... 21 1 6.00 0.00 0.00 2.00 4.00 0.00 ....................................................................................................TATGGCTTGAGAATACACGTAG............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ....................................................................................................TATTGCTTGAGCATACACGTA................................ 21 1 6.00 0.00 0.00 1.00 5.00 0.00 ....................................................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 5.00 1.00 1.00 0.00 3.00 0.00 ....................................................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 5.00 0.00 0.00 1.00 4.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 5.00 0.00 0.00 1.00 4.00 0.00 .....................................................................................................ATTGCTTGAGAATACACGTGGT.............................. 22 1 5.00 0.00 0.00 3.00 2.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGGA................................ 21 1 5.00 0.00 0.00 1.00 4.00 0.00 ....................................................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 4.00 0.00 0.00 1.00 3.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGCA................................ 21 1 4.00 0.00 1.00 0.00 3.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTTG............................... 22 1 4.00 0.00 1.00 0.00 3.00 0.00 .............................................................CACGTGTATACTCATAGCTATA...................................................................... 22 1 4.00 0.00 2.00 1.00 1.00 0.00 ....................................................................................................TATTGCTTGAGATTACACGTAG............................... 22 1 4.00 0.00 0.00 0.00 4.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 4.00 0.00 1.00 1.00 2.00 0.00 ....................................................................................................TATTGCTTGAGAATACCCGTAG............................... 22 1 4.00 0.00 0.00 2.00 2.00 0.00 ....................................................................................................TATTGCTTCAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ....................................................................................................TATTGCTTGAGGATACACGT................................. 20 1 3.00 0.00 0.00 2.00 1.00 0.00 ....................................................................................................TATTGCTTGGGAATACACGTAG............................... 22 1 3.00 0.00 0.00 0.00 3.00 0.00 ....................................................................................................TATTGCTTGAGAATACACATAG............................... 22 1 3.00 1.00 0.00 1.00 1.00 0.00 .............................................................CACGTGTATACTCATAGCT......................................................................... 19 1 3.00 0.00 0.00 0.00 3.00 0.00 ....................................................................................................TATTGCTTGAGTATACACGTAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ....................................................................................................TATTGCTTAAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 2.00 1.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGAAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ....................................................................................................TATTGCGTGAGAATACACGTA................................ 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ....................................................................................................TATTGCTTGTGAATACACGTAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ......................................................................................................TTGCTTGAGAATACACGTAG............................... 20 1 3.00 0.00 1.00 0.00 2.00 0.00 ......................................................................................................TTGCTTGAGAATACACGTAGTT............................. 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ....................................................................................................TAGTGCTTGAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 .....................................................................................................ATTGCTTGAGAATACACGTT................................ 20 1 3.00 0.00 0.00 0.00 3.00 0.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_181141:1110993-1111093 -	66.57	TTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCA-AATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG TTT--------------------AATGGCCACGTGTATTCTTATAGCTGTAACCTGTTATACAAAATGTTATTGCTTGAGAATACACGTAGTTAAC-TAGATTCGTTCAACGGGTCAAACAA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .....................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 3637.00 178.00 1404.00 1917.00 138.00 .....................................................................TATTGCTTGAGAATACACGTA................................ 21 1 353.00 23.00 68.00 261.00 1.00 .....................................................................TATTGCTTGAGAATACACG.................................. 19 1 306.00 0.00 0.00 4.00 302.00 ..............................ACGTGTATTCTTATAGCTGTAAC..................................................................... 23 1 134.00 1.00 28.00 6.00 99.00 .....................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 107.00 5.00 6.00 78.00 18.00 .....................................................................TATTGCTTGAGAATACACGT................................. 20 1 95.00 16.00 5.00 72.00 2.00 .....................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 47.00 5.00 32.00 9.00 1.00 .....................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 17.00 4.00 8.00 4.00 1.00 ..............................ACGTGTATTCTTATAGCTGTA....................................................................... 21 1 14.00 0.00 1.00 1.00 12.00 ....................................................................TTATTGCTTGAGAATACACGTAG............................... 23 1 13.00 0.00 2.00 11.00 0.00 .....................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 11.00 1.00 4.00 6.00 0.00 .....................................................................TATTGCTTGAGAATACACTTAG............................... 22 1 11.00 1.00 4.00 5.00 1.00 .....................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 10.00 0.00 0.00 9.00 1.00 .....................................................................TATCGCTTGAGAATACACGTAG............................... 22 1 10.00 1.00 3.00 6.00 0.00 .....................................................................TATTGCTTGAGAATACACATAG............................... 22 1 9.00 0.00 3.00 5.00 1.00 ..............................ACGTGTATTCTTATAGCTGTAA...................................................................... 22 1 9.00 0.00 1.00 1.00 7.00 ......................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 8.00 0.00 1.00 7.00 0.00 .....................................................................TATTGCTTGAGAGTACACGTAG............................... 22 1 8.00 0.00 4.00 4.00 0.00 .....................................................................TATTGCTTGAAAATACACGTAG............................... 22 1 7.00 0.00 1.00 5.00 1.00 .....................................................................TATTGCTTGAGAATACACGAAG............................... 22 1 7.00 1.00 0.00 5.00 1.00 .....................................................................TATTGCTTAAGAATACACGTAG............................... 22 1 6.00 0.00 4.00 2.00 0.00 .....................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 6.00 1.00 2.00 3.00 0.00 .....................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 6.00 0.00 5.00 1.00 0.00 .....................................................................CATTGCTTGAGAATACACGTAG............................... 22 1 6.00 0.00 0.00 6.00 0.00 .....................................................................TATTTCTTGAGAATACACGTAG............................... 22 1 6.00 1.00 2.00 3.00 0.00 .....................................................................TATTGATTGAGAATACACGTAG............................... 22 1 5.00 0.00 1.00 4.00 0.00 .....................................................................TATTGCTTGAGAATGCACGTAG............................... 22 1 5.00 0.00 0.00 4.00 1.00 .....................................................................TATTGCTTGAGCATACACGTAG............................... 22 1 5.00 1.00 1.00 3.00 0.00 .....................................................................AATTGCTTGAGAATACACGTAG............................... 22 1 5.00 0.00 0.00 5.00 0.00 .....................................................................TATTGCTTGAGAATACGCGTAG............................... 22 1 5.00 0.00 1.00 3.00 1.00 ....................................................................CTATTGCTTGAGAATACACGTAG............................... 23 1 5.00 1.00 1.00 3.00 0.00 ..............................ACGTGTATTCTTATAGCTGT........................................................................ 20 1 5.00 0.00 0.00 0.00 5.00 .....................................................................TATTGCTTGAGAATAAACGTAG............................... 22 1 5.00 0.00 1.00 4.00 0.00 .......................................................................TTGCTTGAGAATACACGTAG............................... 20 1 4.00 0.00 0.00 4.00 0.00 .....................................................................TATTGCCTGAGAATACACGTAG............................... 22 1 4.00 1.00 2.00 1.00 0.00 ....................................................................TTATTGCTTGAGAATACACGTA................................ 22 1 4.00 0.00 1.00 3.00 0.00 .....................................................................TATTGCTTGAGAATACACGTG................................ 21 1 4.00 1.00 0.00 3.00 0.00 .....................................................................TATTGCTTGAGAACACACGTAG............................... 22 1 4.00 0.00 1.00 3.00 0.00 .....................................................................TATTGCTTGAGACTACACGTAG............................... 22 1 4.00 1.00 0.00 3.00 0.00 .....................................................................GATTGCTTGAGAATACACGTAG............................... 22 1 4.00 0.00 0.00 4.00 0.00 .....................................................................TATTGCTTGAGAATACACGTCG............................... 22 1 4.00 1.00 0.00 3.00 0.00 .....................................................................TATTxCTTGAGAATACACGTAG............................... 21 1 4.00 0.00 2.00 2.00 0.00 ..............................ACGTGTATTCTTATAGCTG......................................................................... 19 1 4.00 0.00 0.00 0.00 4.00 .....................................................................TATTGCTTGAGAATCCACGTAG............................... 22 1 4.00 0.00 1.00 3.00 0.00 .....................................................................TACTGCTTGAGAATACACGTAG............................... 22 1 3.00 0.00 2.00 1.00 0.00 .....................................................................TATTGCTTGCGAATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 0.00 .....................................................................TATTGCTTGAGAATATACGTAG............................... 22 1 3.00 0.00 2.00 1.00 0.00 .....................................................................TATTGTTTGAGAATACACGTAG............................... 22 1 3.00 1.00 1.00 1.00 0.00 .....................................................................TATTGCTTGAGGATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 0.00 .....................................................................TATTGCTTCAGAATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 0.00 ....................................................................TTATTGCTTGAGAATACACG.................................. 20 1 3.00 0.00 0.00 0.00 3.00 .....................................................................TATTCCTTGAGAATACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 0.00 .....................................................................TATTGCTCGAGAATACACGTAG............................... 22 1 3.00 0.00 0.00 3.00 0.00 .......................................................................TTGCTTGAGAATACACGTAGTT............................. 22 1 3.00 0.00 0.00 3.00 0.00 ..............................ACGTGTATTCTTATAGCTGTAACC.................................................................... 24 1 3.00 0.00 0.00 0.00 3.00

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_10468:1951-2100 -	50.11	TTACGATGGCGTCGCC------------------------------AATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGA--AATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG GTACGTCGGAGCAGACACGACAGCGGACACAACAATTGGAAATTGGAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGTACAATC-AAATGTTATTGCTTGAGAATACACGTAGTTAAC-AAGATTCTCTCAACGATCCA-ATAA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ....................................................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 1132.00 353.00 601.00 118.00 3.00 57.00 ....................................................................................................TATTGCTTGAGAATACACGTA................................ 21 1 450.00 83.00 354.00 11.00 0.00 2.00 ....................................................................................................TATTGCTTGAGAATACACGT................................. 20 1 189.00 23.00 163.00 0.00 0.00 3.00 ....................................................................................................TATTGCTTGAGAATACACG.................................. 19 1 96.00 1.00 5.00 0.00 3.00 87.00 ............................................................ACGTGTATGCTCGTAGCTATAAC...................................................................... 23 1 41.00 1.00 15.00 5.00 3.00 17.00 ....................................................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 23.00 1.00 11.00 11.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 16.00 1.00 12.00 0.00 0.00 3.00 .....................................................................................................ATTGCTTGAGAATACACGTAG............................... 21 1 12.00 0.00 11.00 1.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGCAG............................... 22 1 10.00 2.00 8.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAA............................... 22 1 9.00 0.00 9.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAT............................... 22 1 9.00 3.00 5.00 1.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGCA................................ 21 1 8.00 1.00 7.00 0.00 0.00 0.00 ...........................................................CACGTGTATGCTCGTAGCT........................................................................... 19 1 6.00 0.00 4.00 0.00 0.00 2.00 .....................................................................................................ATTGCTTGAGAATACACGTAGT.............................. 22 1 6.00 1.00 5.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGC................................. 20 1 5.00 0.00 5.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGATAATACACGTAG............................... 22 1 5.00 0.00 3.00 2.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAC............................... 22 1 5.00 0.00 5.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 5.00 1.00 2.00 0.00 0.00 2.00 ....................................................................................................TATTGCTTGAGAATACACGGAG............................... 22 1 4.00 0.00 3.00 1.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTAGC.............................. 23 1 4.00 0.00 3.00 1.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTTG............................... 22 1 4.00 0.00 4.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACGTT................................ 21 1 4.00 1.00 3.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGACTACACGTAG............................... 22 1 3.00 0.00 1.00 2.00 0.00 0.00 ....................................................................................................TATTGCTTGGGAATACACGTA................................ 21 1 3.00 0.00 3.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGGGAATACACGTAG............................... 22 1 3.00 1.00 2.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATACACCTAG............................... 22 1 3.00 0.00 3.00 0.00 0.00 0.00 ....................................................................................................TATTGCTTGAGAATCCACGTAG............................... 22 1 3.00 1.00 1.00 1.00 0.00 0.00

droMoj3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_6496:10610032-10610171 +	56.87	TTACGATGGCGTCGCC---------------AATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTG-AAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCA-----GCAATAAAAAGAG CAACGGA-GTGTGGACACAATTGGAAATTGGAATCGGCAATGGCCACGTGTATGCTCGTAGCTATAACTGGTACAATCAAATGTTATTGCTTGAGAATACACGTAGTTAGC-CAGATTCGCCCAACATGGCAATGGCAACAT Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ....................................................................................TATTGCTTGAGAATACACGTAG.................................... 22 1 3540.00 952.00 1654.00 800.00 134.00 ....................................................................................TATTGCTTGAGAATACACGTA..................................... 21 1 708.00 141.00 378.00 189.00 0.00 ....................................................................................TATTGCTTGAGAATACACGT...................................... 20 1 348.00 70.00 192.00 86.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTAGT................................... 23 1 90.00 37.00 28.00 21.00 4.00 ........GTGTGCACACGATTGGAAAT.................................................................................................................. 20 1 79.00 79.00 0.00 0.00 0.00 .............................................ACGTGTATGCTCGTAGCTATAAC.......................................................................... 23 1 55.00 3.00 20.00 12.00 20.00 ....................................................................................TATTGCTTGAGAATACACGTAT.................................... 22 1 37.00 8.00 18.00 11.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTAGA................................... 23 1 27.00 12.00 10.00 4.00 1.00 ........GTGTGCACACGATTGGAAA................................................................................................................... 19 1 26.00 26.00 0.00 0.00 0.00 .....................................................................................ATTGCTTGAGAATACACGTAG.................................... 21 1 19.00 2.00 10.00 7.00 0.00 ....................................................................................TATTGCTTTAGAATACACGTAG.................................... 22 1 15.00 1.00 3.00 11.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTGG.................................... 22 1 14.00 1.00 7.00 5.00 1.00 ....................................................................................TATTGCTTGAGCATACACGTAG.................................... 22 1 14.00 1.00 1.00 12.00 0.00 .........TGTGCACACGATTGGAAAT.................................................................................................................. 19 1 12.00 12.00 0.00 0.00 0.00 ....................................................................................TATTGCTTGAGAATACACG....................................... 19 1 11.00 1.00 6.00 4.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTCG.................................... 22 1 10.00 0.00 2.00 8.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTT..................................... 21 1 10.00 3.00 5.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACCCGTAG.................................... 22 1 9.00 1.00 3.00 4.00 1.00 ....................................................................................TATTGCTTGAGAATACACGCAG.................................... 22 1 8.00 0.00 5.00 3.00 0.00 ....................................................................................TAGTGCTTGAGAATACACGTAG.................................... 22 1 8.00 0.00 6.00 2.00 0.00 ....................................................................................TATTGCTGGAGAATACACGTAG.................................... 22 1 7.00 0.00 6.00 1.00 0.00 ....................................................................................TGTTGCTTGAGAATACACGTAG.................................... 22 1 7.00 1.00 4.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACCCGT...................................... 20 1 7.00 0.00 0.00 7.00 0.00 ....................................................................................TATTGCTTGATAATACACGTAG.................................... 22 1 6.00 0.00 0.00 6.00 0.00 ....................................................................................CATTGCTTGAGAATACACGTAG.................................... 22 1 6.00 1.00 5.00 0.00 0.00 ..........GTGCACACGATTGGAAAT.................................................................................................................. 18 1 6.00 6.00 0.00 0.00 0.00 ....................................................................................TATTGCTTGAGACTACACGTAG.................................... 22 1 6.00 0.00 1.00 5.00 0.00 ....................................................................................TATTGCTTGAGAATACACTTAG.................................... 22 1 6.00 3.00 1.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTAA.................................... 22 1 6.00 0.00 4.00 2.00 0.00 ....................................................................................TATTGATTGAGAATACACGTAG.................................... 22 1 6.00 0.00 5.00 1.00 0.00 ....................................................................................TATTGCTTTAGAATACACGTA..................................... 21 1 6.00 1.00 2.00 3.00 0.00 ....................................................................................TATTGCTTGAGAATACATGTAG.................................... 22 1 6.00 4.00 0.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACACGAAG.................................... 22 1 5.00 0.00 5.00 0.00 0.00 ....................................................................................TATTGCTTGAGCATACACGTA..................................... 21 1 5.00 0.00 1.00 4.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTTG.................................... 22 1 5.00 0.00 3.00 2.00 0.00 ....................................................................................TATTGCTTGAGGATACACGTAG.................................... 22 1 5.00 0.00 5.00 0.00 0.00 .............................................ACGTGTATGCTCGTAGCTATA............................................................................ 21 1 5.00 0.00 2.00 0.00 3.00 ....................................................................................TATTGCTTGAGAATACACGTAC.................................... 22 1 5.00 1.00 2.00 2.00 0.00 ....................................................................................TATTGCTTTAGAATACACGT...................................... 20 1 5.00 0.00 2.00 3.00 0.00 ....................................................................................TATTGCTTGAGATTACACGTAG.................................... 22 1 5.00 0.00 4.00 1.00 0.00 ....................................................................................TATTGCTTGAGAATACCCGTA..................................... 21 1 5.00 0.00 0.00 5.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTAGTT.................................. 24 1 5.00 3.00 1.00 0.00 1.00 ......................................................................................TTGCTTGAGAATACACGTAG.................................... 20 1 5.00 3.00 2.00 0.00 0.00 ....................................................................................TATTACTTGAGAATACACGTAG.................................... 22 1 4.00 0.00 4.00 0.00 0.00 ....................................................................................TATTGCTCGAGAATACACGTAG.................................... 22 1 4.00 0.00 0.00 4.00 0.00 ....................................................................................TATTGCTTGAGAATGCACGTAG.................................... 22 1 4.00 0.00 2.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACACGGAG.................................... 22 1 4.00 0.00 4.00 0.00 0.00 ....................................................................................TATTGCTTGAGAATACACATAG.................................... 22 1 4.00 1.00 2.00 1.00 0.00 ....................................................................................TATTGCCTGAGAATACACGTAG.................................... 22 1 4.00 1.00 1.00 1.00 1.00 .............................................ACGTGTATGCTCGTAGCTATAA........................................................................... 22 1 4.00 0.00 2.00 1.00 1.00 ....................................................................................TATTGCTTGAGAATACACCTAG.................................... 22 1 4.00 0.00 2.00 1.00 1.00 .....................................................................................ATTGCTTGAGAATACACGT...................................... 19 1 3.00 1.00 0.00 2.00 0.00 ....................................................................................TATTGCTTGAGAGTACACGTAG.................................... 22 1 3.00 0.00 1.00 1.00 1.00 ....................................................................................TACTGCTTGAGAATACACGTAG.................................... 22 1 3.00 0.00 1.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATACACGTAGC................................... 23 1 3.00 0.00 2.00 1.00 0.00 ....................................................................................TATTGCTTCAGAATACACGTA..................................... 21 1 3.00 0.00 1.00 2.00 0.00 ....................................................................................TATTGCTTGAGAATCCACGTAG.................................... 22 1 3.00 1.00 1.00 1.00 0.00 ....................................................................................TATTGCTTGAGAATCCACGTA..................................... 21 1 3.00 0.00 3.00 0.00 0.00 ........GTGTGCACACGATTGGAA.................................................................................................................... 18 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTGTTTGAGAATACACGTAG.................................... 22 1 3.00 1.00 1.00 1.00 0.00 ....................................................................................TATTGCTTGAGAATACACGGAC.................................... 22 1 3.00 0.00 2.00 1.00 0.00 ....................................................................................TAGTGCTTGAGAATACACGTTG.................................... 22 1 3.00 0.00 1.00 2.00 0.00 ....................................................................................TATTGCTTGGGAATACACGTAG.................................... 22 1 3.00 1.00 1.00 1.00 0.00 ....................................................................................TATTGCTTGAGAATTCACGTAG.................................... 22 1 3.00 2.00 1.00 0.00 0.00 ....................................................................................TATTGCTTGAGCATACACGT...................................... 20 1 3.00 0.00 1.00 2.00 0.00 ....................................................................................TATTGCTTGCGAATACACGTAG.................................... 22 1 3.00 0.00 2.00 1.00 0.00 ....................................................................................TATTGCTTGAGAGTACACGTA..................................... 21 1 3.00 1.00 2.00 0.00 0.00

droGri2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_15245:16918481-16918602 -	72.16	TTACGATGGCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAA--ATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAG GGAGATTGGAAAATTAAAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGAACAAT-CAAATGTTATTGCTTGAGAATACACGTAGTTAA-CAAGATTGCCTCAACGACTCCAATAA Size Hit Count Total Norm V109 Male body .......................................................................TATTGCTTGAGAATACACGTAG............................... 22 1 46.00 46.00 .......................................................................TATTGCTTGAGAATACACGTA................................ 21 1 12.00 12.00 .......................................................................TATTGCTTGAGAATACACGT................................. 20 1 6.00 6.00 .......................................................................TATTGCTTGAGAATACATGTAG............................... 22 1 2.00 2.00 .......................................................................TATTGCTTGAGAATACAAGTAG............................... 22 1 1.00 1.00 .......................................................................TATTGCTTTAGAATACACGTAG............................... 22 1 1.00 1.00 .......................................................................TATTGCTTGAGAATACAGGTAG............................... 22 1 1.00 1.00 .......................................................................TATTGCTCGAGAATACACGTAG............................... 22 1 1.00 1.00 .......................................................................TATTGCTTGAGAATACACGTAGA.............................. 23 1 1.00 1.00 .......................................................................TAATGCTTGAGAATACACGTA................................ 21 1 1.00 1.00 .......................................................................TATTGCTTGAGAATACACGTGG............................... 22 1 1.00 1.00 .......................................................................TATTGCTTGAGAATACACGTAGT.............................. 23 1 1.00 1.00

Generated: 04/20/2012 at 05:21:56 EDT