dme-mir-125- Best orthologs

dme-mir-125	chr2L:18472315-18472424 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 18472343-18472364
   star strand at position 18472382-18472402
   mutations
   read mismatches

Notes: miRNA is very well conserved

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2L:18472300-18472439 +		1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droSim1	chr2L:18161211-18161350 +	LASTZ	1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droSec1	super_7:2098251-2098391 +	LASTZ	1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA-ATA-----AGGC
droYak2	chr2R:4989099-4989238 +	LASTZ	1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droEre2	scaffold_4845:5799089-5799228 -	LASTZ	1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droEug1	scf7180000409447:414929-415073 +	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGA------------------------AAA--ATAAACAAAGGC
droBia1	scf7180000302422:5215223-5215364 -	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC
droTak1	scf7180000415867:747213-747354 +	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC
droEle1	scf7180000491338:2439758-2439904 +	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAAGAAAACCCAGGC
droRho1	scf7180000780227:12891-13033 +	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA--AA--CAAAGGC
droFic1	scf7180000454059:475465-475602 -	LASTZ	4	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAA---------AGGC
droKik1	scf7180000302401:71492-71636 -	LASTZ	4	A------TATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCAA------------------------AAAAAGTA-----AGAT
droAna3	scaffold_12916:2379461-2379598 +	LASTZ	1	AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAC------------------------AAAA---------AAGA
droBip1	scf7180000396430:325154-325295 +	LASTZ	4	AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAAGATA-----AAGC
dp4	chr4_group3:3635996-3636136 +	LASTZ	1	AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAAAAAA-----AAGC
droPer1	super_2335:2506-2645 +	LASTZ	1	AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAA-AAA-----AAGC
droWil1	scaffold_180708:11623324-11623458 +	LASTZ	1	AT-----TATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------------------AAA------------GC
droVir3	scaffold_12963:18451638-18451806 +	LASTZ	1	TATTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAAA--ATA-----AGAA
droMoj3	scaffold_6500:6184266-6184401 -	LASTZ	1	CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--GTA---------
droGri2	scaffold_15252:6428908-6429045 +	LASTZ	1	CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA---------AAAC

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droSim1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droSec1	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA-ATA-----AGGC
droYak2	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droEre2	AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC
droEug1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGA------------------------AAA--ATAAACAAAGGC
droBia1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC
droTak1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC
droEle1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAAGAAAACCCAGGC
droRho1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA--AA--CAAAGGC
droFic1	AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAA---------AGGC
droKik1	A------TATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCAA------------------------AAAAAGTA-----AGAT
droAna3	AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAC------------------------AAAA---------AAGA
droBip1	AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAAGATA-----AAGC
dp4	AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAAAAAA-----AAGC
droPer1	AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAA-AAA-----AAGC
droWil1	AT-----TATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------------------AAA------------GC
droVir3	TATTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAAA--ATA-----AGAA
droMoj3	CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--GTA---------
droGri2	CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA---------AAAC

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	4380.00	20.00	3847.00	505.00	8.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	1838.00	1.00	1641.00	194.00	2.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	1207.00	0.00	1136.00	71.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	1019.00	0.00	780.00	232.00	7.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	965.00	0.00	839.00	123.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	789.00	0.00	673.00	113.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	365.00	0.00	331.00	31.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	361.00	0.00	341.00	16.00	4.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	335.00	0.00	310.00	24.00	1.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	172.00	0.00	162.00	6.00	4.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	141.00	0.00	133.00	8.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	128.00	0.00	91.00	37.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	117.00	0.00	91.00	25.00	1.00
........................................................................................TCACAAGTTTTGATCTCCGGT......................................................................	21	1	115.00	0.00	103.00	9.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGACC........................................................................................................	24	1	109.00	0.00	104.00	4.00	1.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	74.00	0.00	71.00	1.00	2.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	54.00	0.00	51.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTTTT.....................................................................................................	27	1	50.00	0.00	45.00	5.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAC....................................................................	21	1	46.00	0.00	36.00	10.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTA.....................................................................	20	1	38.00	0.00	30.00	8.00	0.00
....................................................CCCTGAGACCCTAACTTGTG...........................................................................................................	20	1	34.00	0.00	33.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACG........................................................................................................	24	1	28.00	0.00	25.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	25.00	0.00	22.00	3.00	0.00
.......................................................TGAGACCCTAACTTGTGA..........................................................................................................	18	1	20.00	0.00	18.00	2.00	0.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	20.00	0.00	18.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAC........................................................................................................	24	1	19.00	0.00	18.00	1.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGG.......................................................................	20	1	19.00	0.00	18.00	1.00	0.00
.......................................................................................TTCACAAGTTTTGATCTCCGGTAT....................................................................	24	1	19.00	0.00	14.00	5.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATA...................................................................	22	1	17.00	0.00	15.00	2.00	0.00
.........................................................................................CACAAGTTTTGATCTCCGGTAT....................................................................	22	1	16.00	0.00	13.00	3.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGC......................................................................	21	1	15.00	0.00	13.00	2.00	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	14.00	0.00	12.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	13.00	1.00	11.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGG............................................................................................................	20	1	13.00	0.00	13.00	0.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGG......................................................................	21	1	13.00	0.00	12.00	1.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGT......................................................................	19	1	13.00	0.00	10.00	3.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGG..........................................................................................................	22	1	12.00	0.00	10.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAG.........................................................................................................	23	1	11.00	0.00	6.00	4.00	1.00
...................................................TCCCTGATACCCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	9.00	2.00	0.00
....................................................CCCTGAGACCCTAACTTGTGAC.........................................................................................................	22	1	10.00	0.00	8.00	2.00	0.00
....................................................CCCTGAGACCCTAACTTGTGG..........................................................................................................	21	1	9.00	0.00	9.00	0.00	0.00
....................................................CCCTGAGACCCTAACTTGTGACT........................................................................................................	23	1	9.00	0.00	8.00	1.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTA.....................................................................	22	1	9.00	0.00	5.00	4.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	7.00	2.00	0.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	9.00	0.00	7.00	2.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAC....................................................................	23	1	8.00	0.00	7.00	1.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGG.......................................................................	18	1	8.00	0.00	8.00	0.00	0.00
.......................................................TGAGACCCTAACTTGTGAC.........................................................................................................	19	1	7.00	0.00	5.00	2.00	0.00
......................................................CTGAGACCCTAACTTGTG...........................................................................................................	18	1	7.00	0.00	6.00	1.00	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	7.00	1.00	6.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGGG...........................................................................................................	21	1	7.00	0.00	6.00	1.00	0.00
...........................................................................................CAAGTTTTGATCTCCGGTAT....................................................................	20	1	7.00	0.00	4.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	7.00	0.00	7.00	0.00	0.00
.......................................................................................TTCACAAGTTTTGATCTCCGGT......................................................................	22	1	7.00	0.00	6.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGAA...........................................................................................................	21	1	6.00	0.00	6.00	0.00	0.00
........................................................................................TCACAAGTTTTGATCTCCG........................................................................	19	1	6.00	0.00	6.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTT..............................................................................................................	18	1	6.00	0.00	6.00	0.00	0.00
...................................................TCCCTGGGACCCTAACTTGTG...........................................................................................................	21	1	6.00	0.00	6.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	6.00	0.00	6.00	0.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATC...................................................................	22	1	6.00	0.00	5.00	1.00	0.00
......................................................CTGAGACCCTAACTTGTGACT........................................................................................................	21	1	6.00	0.00	4.00	2.00	0.00
..........................................................................................ACAGGTTTTGATCTCCGGTAT....................................................................	21	1	6.00	0.00	6.00	0.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	5.00	0.00	5.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	5.00	0.00	2.00	3.00	0.00
.............................................................................................AGTTTTGATCTCCGGTAT....................................................................	18	1	5.00	0.00	5.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGG..........................................................................................................	22	1	4.00	0.00	2.00	2.00	0.00
..........................................................................................ACAATTTTTGATCTCCGGTAT....................................................................	21	1	4.00	0.00	3.00	1.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	4.00	0.00	3.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
....................................................CCCTGAGACCCTAACTTGT............................................................................................................	19	1	4.00	0.00	4.00	0.00	0.00
...................................................TCCCTGACACCCTAACTTGTGACT........................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTTG......................................................................................................	26	1	4.00	0.00	4.00	0.00	0.00
....................................................CCCTGAGACCCTAACTTGTGAA.........................................................................................................	22	1	4.00	0.00	2.00	0.00	2.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	3.00	1.00	0.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGA............................................................................................................	20	1	4.00	0.00	3.00	1.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAG....................................................................	21	1	4.00	0.00	2.00	2.00	0.00
....................................................CCCTGAGACCCTAACTTG.............................................................................................................	18	1	4.00	0.00	4.00	0.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGTTAT....................................................................	21	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	3.00	0.00	2.00	1.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGAA.........................................................................................................	23	1	3.00	0.00	3.00	0.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTG.....................................................................	20	1	3.00	0.00	1.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	3.00	0.00	2.00	1.00	0.00
.......................................................TGAGACCCTAACTTGTGACT........................................................................................................	20	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGGGG..........................................................................................................	22	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGAC.........................................................................................................	23	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGACT........................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGATCCTAACTTGTG...........................................................................................................	21	1	3.00	0.00	3.00	0.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGCAT....................................................................	21	1	3.00	0.00	1.00	2.00	0.00
...................................................TCCCTGAGACTCTAACTTG.............................................................................................................	19	1	3.00	0.00	3.00	0.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATAA..................................................................	23	1	3.00	0.00	2.00	1.00	0.00
.......................................................................................TTCACAAGTTTTGATCTCCGG.......................................................................	21	1	3.00	0.00	3.00	0.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGACT........................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00
............................................................................................AAGTTTTGATCTCCGGTAT....................................................................	19	1	3.00	0.00	1.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTGG.............................................................................................................	19	1	3.00	0.00	3.00	0.00	0.00

droSec1

AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA-ATA-----AGGC	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	29981.00	2609.00	37.00	27335.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	12690.00	353.00	18.00	12319.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	9665.00	471.00	7.00	9187.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	1179.00	78.00	0.00	1101.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	473.00	43.00	0.00	430.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	459.00	1.00	0.00	458.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	390.00	214.00	0.00	176.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	261.00	18.00	0.00	243.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	102.00	3.00	0.00	99.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	97.00	1.00	0.00	96.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	91.00	4.00	0.00	87.00
...................................................TCCCTGAGACCCTAACTTGA............................................................................................................	20	1	88.00	6.00	0.00	82.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	58.00	2.00	0.00	56.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	54.00	4.00	0.00	50.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	53.00	35.00	0.00	18.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	50.00	16.00	0.00	34.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	48.00	2.00	0.00	46.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	47.00	17.00	0.00	30.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	42.00	3.00	0.00	39.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	42.00	1.00	0.00	41.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	42.00	18.00	0.00	24.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	41.00	1.00	0.00	40.00
...................................................TCCCTGAAACCCTAACTTGTGA..........................................................................................................	22	1	41.00	1.00	0.00	40.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	40.00	0.00	0.00	40.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	40.00	0.00	0.00	40.00
...................................................TCCCTGAGACCCTAACTTGAGA..........................................................................................................	22	1	39.00	1.00	0.00	38.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	38.00	0.00	0.00	38.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	37.00	4.00	0.00	33.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	35.00	2.00	0.00	33.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	35.00	7.00	0.00	28.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	34.00	5.00	0.00	29.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	34.00	1.00	0.00	33.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	32.00	0.00	0.00	32.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	30.00	3.00	0.00	27.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	30.00	0.00	0.00	30.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	29.00	0.00	0.00	29.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	29.00	1.00	0.00	28.00
...................................................TCCCTGATACCCTAACTTGT............................................................................................................	20	1	28.00	1.00	0.00	27.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	26.00	2.00	0.00	24.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	26.00	4.00	0.00	22.00
...................................................TCCCTTAGACCCTAACTTGTGA..........................................................................................................	22	1	26.00	1.00	0.00	25.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	24.00	4.00	0.00	20.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	24.00	3.00	0.00	21.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	23.00	2.00	0.00	21.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	23.00	2.00	0.00	21.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	22.00	1.00	0.00	21.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	22.00	14.00	0.00	8.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	22.00	3.00	0.00	19.00
...................................................TCCATGAGACCCTAACTTGT............................................................................................................	20	1	22.00	0.00	0.00	22.00
...................................................TCCCTGAGAACCTAACTTGT............................................................................................................	20	1	22.00	0.00	0.00	22.00
...................................................TCCCTGAGACCCTAACTTGTGTT.........................................................................................................	23	1	21.00	6.00	0.00	15.00
...................................................TCCCTGAAACCCTAACTTGT............................................................................................................	20	1	21.00	1.00	0.00	20.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	21.00	2.00	0.00	19.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	21.00	2.00	0.00	19.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	20.00	0.00	0.00	20.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	19.00	3.00	1.00	15.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	19.00	3.00	0.00	16.00
...................................................TCCATGAGACCCTAACTTGTG...........................................................................................................	21	1	19.00	2.00	0.00	17.00
...................................................TCCCTGAAACCCTAACTTGTG...........................................................................................................	21	1	18.00	0.00	0.00	18.00
...................................................TCCCTGAGACCATAACTTGT............................................................................................................	20	1	18.00	0.00	0.00	18.00
...................................................CCCCTGAGACCCTAACTTGT............................................................................................................	20	1	18.00	0.00	0.00	18.00
........................................................................................TCACAAGTTTTGATCTCCGGT......................................................................	21	1	18.00	5.00	0.00	13.00
...................................................TCCCTGAGACACTAACTTGTG...........................................................................................................	21	1	17.00	0.00	0.00	17.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	17.00	0.00	0.00	17.00
...................................................TCCCTGAGACCCTAACTT..............................................................................................................	18	1	16.00	2.00	0.00	14.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	1	16.00	0.00	0.00	16.00
...................................................TCCCTGAGACCCTAACTTCTG...........................................................................................................	21	1	16.00	5.00	0.00	11.00
...................................................TCCCTGAGACCCTAACTGA.............................................................................................................	19	1	16.00	3.00	0.00	13.00
...................................................TCCCTAAGACCCTAACTTGT............................................................................................................	20	1	16.00	0.00	0.00	16.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	15.00	2.00	0.00	13.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	15.00	11.00	0.00	4.00
...................................................TCCCTGAGACCATAACTTGTG...........................................................................................................	21	1	15.00	0.00	0.00	15.00
...................................................TCCCTTAGACCCTAACTTGT............................................................................................................	20	1	15.00	0.00	0.00	15.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	2.00	0.00	12.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	2.00	0.00	12.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	1	14.00	4.00	0.00	10.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	14.00	1.00	0.00	13.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	1.00	0.00	13.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	1	14.00	1.00	0.00	13.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	14.00	0.00	0.00	14.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	14.00	1.00	0.00	13.00
...................................................TCCCTGAGACCCTAATTTGTGA..........................................................................................................	22	1	13.00	2.00	0.00	11.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	13.00	0.00	0.00	13.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	13.00	2.00	0.00	11.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	13.00	0.00	0.00	13.00
...................................................TCCCTGAGACCCTAACTAGTGA..........................................................................................................	22	1	13.00	0.00	0.00	13.00
...................................................TCCCTGAGACACTAACTTGT............................................................................................................	20	1	13.00	0.00	0.00	13.00
...................................................TCCCTGAGACCCTAACTTCT............................................................................................................	20	1	13.00	6.00	0.00	7.00
...................................................TCCCTGAGGCCCTAACTTGT............................................................................................................	20	1	13.00	0.00	0.00	13.00
...................................................TCCCTGACACCCTAACTTGT............................................................................................................	20	1	13.00	2.00	0.00	11.00
...................................................TCCCTGAGACCCCAACTTGT............................................................................................................	20	1	12.00	2.00	0.00	10.00
...................................................TCCCTGAGACCCTAACTTGTGAG.........................................................................................................	23	1	12.00	1.00	0.00	11.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	12.00	1.00	0.00	11.00
...................................................TCCCTAAGACCCTAACTTGTG...........................................................................................................	21	1	12.00	0.00	0.00	12.00
...................................................TCCCTGAGACCCTAACCTGT............................................................................................................	20	1	12.00	0.00	0.00	12.00
...................................................TCCCTGAGACCCTAACTTATG...........................................................................................................	21	1	12.00	2.00	0.00	10.00
...................................................TCCCTGAGGCCCTAACTTGTG...........................................................................................................	21	1	12.00	1.00	0.00	11.00
..................................................CTCCCTGAGACCCTAACTTGTG...........................................................................................................	22	1	12.00	0.00	0.00	12.00
...................................................TCCCTGAGACCCTAACTTAT............................................................................................................	20	1	11.00	1.00	0.00	10.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	11.00	1.00	0.00	10.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	0.00	11.00

droYak2

AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	23745.00	8.00	8207.00	438.00	13642.00	1450.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	4708.00	1.00	1702.00	70.00	2574.00	361.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	1886.00	1.00	658.00	33.00	1154.00	40.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	513.00	0.00	73.00	6.00	167.00	267.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	365.00	0.00	13.00	1.00	19.00	332.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	363.00	0.00	35.00	1.00	327.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	341.00	0.00	11.00	0.00	23.00	307.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	307.00	0.00	27.00	39.00	45.00	196.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	283.00	0.00	70.00	0.00	213.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	252.00	0.00	35.00	0.00	217.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	225.00	0.00	54.00	5.00	163.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	168.00	0.00	3.00	1.00	5.00	159.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	146.00	0.00	49.00	6.00	88.00	3.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	139.00	0.00	47.00	1.00	91.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	120.00	0.00	2.00	1.00	18.00	99.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	109.00	0.00	20.00	1.00	35.00	53.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	98.00	0.00	3.00	10.00	11.00	74.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	92.00	0.00	18.00	1.00	72.00	1.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	76.00	0.00	8.00	0.00	50.00	18.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	60.00	0.00	21.00	1.00	37.00	1.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	59.00	0.00	0.00	4.00	2.00	53.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	57.00	0.00	18.00	2.00	36.00	1.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	56.00	0.00	11.00	0.00	45.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	1	55.00	0.00	13.00	0.00	42.00	0.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	55.00	0.00	8.00	0.00	47.00	0.00
...................................................TCCCTGAGACCCTACCTTGTG...........................................................................................................	21	1	55.00	0.00	2.00	0.00	53.00	0.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	1	54.00	0.00	9.00	0.00	45.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	53.00	0.00	22.00	0.00	30.00	1.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	52.00	0.00	14.00	0.00	37.00	1.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	50.00	0.00	0.00	0.00	2.00	48.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	47.00	0.00	14.00	1.00	30.00	2.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	43.00	0.00	7.00	0.00	9.00	27.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	41.00	0.00	10.00	0.00	31.00	0.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	39.00	0.00	6.00	0.00	33.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACC........................................................................................................	24	1	38.00	0.00	0.00	0.00	0.00	38.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	38.00	0.00	11.00	0.00	27.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTTTT.....................................................................................................	27	1	38.00	0.00	2.00	0.00	0.00	36.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	35.00	0.00	13.00	1.00	19.00	2.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	34.00	0.00	8.00	0.00	26.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	1	33.00	0.00	7.00	0.00	26.00	0.00
...................................................TCCCTGTGACCCTAACTTGTGA..........................................................................................................	22	1	33.00	0.00	7.00	0.00	26.00	0.00
...................................................TCCCTGAGACCCTCACTTGTGC..........................................................................................................	22	1	32.00	0.00	2.00	0.00	30.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGC..........................................................................................................	22	1	32.00	0.00	1.00	0.00	31.00	0.00
...................................................TCCCTGAGACCCTACCTTGT............................................................................................................	20	1	31.00	0.00	4.00	0.00	27.00	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	31.00	0.00	13.00	0.00	17.00	1.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	29.00	0.00	7.00	0.00	19.00	3.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	28.00	0.00	5.00	0.00	23.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	28.00	0.00	10.00	0.00	18.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTG...........................................................................................................	21	1	27.00	0.00	3.00	0.00	12.00	12.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	26.00	0.00	6.00	0.00	20.00	0.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	26.00	0.00	3.00	1.00	21.00	1.00
...................................................TCCCTGAGACCCTCACTTGT............................................................................................................	20	1	26.00	0.00	4.00	0.00	22.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	25.00	0.00	11.00	0.00	13.00	1.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	24.00	0.00	10.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTTACTTGTGA..........................................................................................................	22	1	24.00	0.00	1.00	1.00	22.00	0.00
...................................................TCCCTGAGACCCTCCCTTGTGA..........................................................................................................	22	1	24.00	0.00	2.00	0.00	22.00	0.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	23.00	0.00	6.00	0.00	17.00	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	22.00	0.00	8.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	21.00	0.00	9.00	0.00	12.00	0.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	1	21.00	0.00	3.00	0.00	18.00	0.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	20.00	0.00	10.00	0.00	9.00	1.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	20.00	0.00	6.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	19.00	0.00	6.00	0.00	11.00	2.00
...................................................TCCCGGAGACCCTAACTTGTGA..........................................................................................................	22	1	19.00	0.00	0.00	0.00	19.00	0.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	19.00	0.00	3.00	0.00	6.00	10.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	18.00	0.00	11.00	0.00	7.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTGT..........................................................................................................	22	1	17.00	0.00	3.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	17.00	0.00	5.00	1.00	11.00	0.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	17.00	0.00	5.00	0.00	12.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	17.00	0.00	14.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	17.00	0.00	8.00	0.00	9.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTG...........................................................................................................	21	1	16.00	0.00	5.00	0.00	11.00	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	16.00	0.00	5.00	0.00	11.00	0.00
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	1	16.00	0.00	1.00	0.00	15.00	0.00
.......................................................................................TTCACAAGTTTTGATCTCCGGTAT....................................................................	24	1	16.00	0.00	0.00	1.00	4.00	11.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	1	15.00	0.00	4.00	0.00	11.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	15.00	0.00	5.00	0.00	7.00	3.00
...................................................TCCCTGCGACCCTAACTTGTG...........................................................................................................	21	1	14.00	0.00	2.00	0.00	12.00	0.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	5.00	0.00	9.00	0.00
...................................................TCCCTGCGACCCTAACTTGTGC..........................................................................................................	22	1	14.00	0.00	2.00	0.00	12.00	0.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	3.00	0.00	11.00	0.00
...................................................TCCCTGAGACCCGAACTTGTGA..........................................................................................................	22	1	14.00	0.00	0.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	14.00	0.00	7.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	14.00	0.00	1.00	0.00	9.00	4.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	14.00	1.00	8.00	0.00	4.00	1.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	13.00	0.00	9.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	13.00	0.00	2.00	0.00	6.00	5.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	13.00	0.00	6.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTGAGA..........................................................................................................	22	1	12.00	0.00	2.00	0.00	10.00	0.00
...................................................TCCCTGAGTCCCTCACTTGTGA..........................................................................................................	22	1	12.00	0.00	3.00	0.00	9.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTG...........................................................................................................	21	1	12.00	0.00	3.00	0.00	7.00	2.00
..........................................................................................ACAAGTTTTGATCTCCGGTA.....................................................................	20	1	12.00	0.00	0.00	4.00	0.00	8.00
...................................................TCCCTGAGACCCTAACGTGTG...........................................................................................................	21	1	11.00	0.00	2.00	0.00	9.00	0.00
...................................................TCCCTGGGACCCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	3.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACCTGTG...........................................................................................................	21	1	11.00	0.00	5.00	0.00	6.00	0.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	0.00	0.00	11.00	0.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	11.00	0.00	5.00	0.00	6.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTGC..........................................................................................................	22	1	11.00	0.00	0.00	0.00	11.00	0.00
.......................................................TGAGACCCTAACTTGTGA..........................................................................................................	18	1	11.00	0.00	0.00	0.00	4.00	7.00
...................................................TCCCTGAGTCCCTAACTGGTGA..........................................................................................................	22	1	11.00	0.00	1.00	0.00	10.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGC..........................................................................................................	22	1	11.00	0.00	2.00	0.00	9.00	0.00

droEre2

AA-----TATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--ATA-----AGGC	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	60821.00	3.00	10492.00	0.00	50326.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	14903.00	2.00	2179.00	0.00	12722.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	10838.00	0.00	592.00	0.00	10246.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	1055.00	0.00	10.00	0.00	1045.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	958.00	0.00	5.00	0.00	953.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	730.00	0.00	9.00	0.00	721.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	711.00	0.00	78.00	0.00	633.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	711.00	0.00	104.00	0.00	607.00
...................................................TCCCTTAGACCCTAACTTGTGA..........................................................................................................	22	1	542.00	0.00	2.00	0.00	540.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	526.00	0.00	60.00	0.00	466.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	479.00	0.00	32.00	0.00	447.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	477.00	0.00	11.00	0.00	466.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	395.00	0.00	16.00	0.00	379.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	355.00	0.00	24.00	0.00	331.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	326.00	0.00	5.00	0.00	321.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	278.00	0.00	13.00	0.00	265.00
...................................................TCCATGAGACCCTAACTTGTG...........................................................................................................	21	1	235.00	0.00	0.00	0.00	235.00
...................................................TCCATGAGACCCTAACTTGT............................................................................................................	20	1	206.00	0.00	0.00	0.00	206.00
...................................................TCCCTGAGACCATAACTTGTG...........................................................................................................	21	1	205.00	0.00	0.00	0.00	205.00
...................................................TCCCTGAGACCATAACTTGT............................................................................................................	20	1	180.00	0.00	0.00	0.00	180.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	179.00	0.00	1.00	0.00	178.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	166.00	0.00	140.00	0.00	26.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	166.00	0.00	15.00	0.00	151.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	163.00	0.00	23.00	0.00	140.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	140.00	0.00	0.00	0.00	140.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	133.00	0.00	4.00	0.00	129.00
...................................................TCCCTGAGACCCTAACTTGA............................................................................................................	20	1	132.00	0.00	0.00	0.00	132.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	131.00	0.00	94.00	0.00	37.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	127.00	0.00	34.00	0.00	93.00
...................................................TCCCTTAGACCCTAACTTGTG...........................................................................................................	21	1	124.00	0.00	0.00	0.00	124.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	118.00	0.00	87.00	0.00	31.00
...................................................TCCCTGATACCCTAACTTGTG...........................................................................................................	21	1	115.00	0.00	4.00	0.00	111.00
...................................................TCCCTGATACCCTAACTTGT............................................................................................................	20	1	113.00	0.00	1.00	0.00	112.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	1	108.00	0.00	5.00	0.00	103.00
...................................................TCCCTTAGACCCTAACTTGT............................................................................................................	20	1	108.00	0.00	0.00	0.00	108.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	105.00	0.00	8.00	0.00	97.00
...................................................TCCCTGAGACACTAACTTGT............................................................................................................	20	1	104.00	0.00	1.00	0.00	103.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	100.00	0.00	28.00	0.00	72.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	92.00	0.00	6.00	0.00	86.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	92.00	0.00	6.00	0.00	86.00
...................................................TCCCTGAGACACTAACTTGTG...........................................................................................................	21	1	87.00	0.00	0.00	0.00	87.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	86.00	0.00	11.00	0.00	75.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	84.00	0.00	19.00	0.00	65.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	80.00	0.00	15.00	0.00	65.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	1	76.00	0.00	0.00	0.00	76.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	74.00	1.00	12.00	0.00	61.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	71.00	0.00	9.00	0.00	62.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	69.00	0.00	9.00	0.00	60.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	67.00	0.00	16.00	0.00	51.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	65.00	0.00	8.00	0.00	57.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	65.00	0.00	4.00	0.00	61.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	64.00	0.00	9.00	0.00	55.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	63.00	0.00	12.00	0.00	51.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	57.00	0.00	29.00	0.00	28.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	54.00	0.00	8.00	0.00	46.00
...................................................TCCCTGAGACCCTAATTTGTGA..........................................................................................................	22	1	52.00	0.00	4.00	0.00	48.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	51.00	0.00	8.00	0.00	43.00
....................................................TCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	51.00	0.00	2.00	0.00	49.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	50.00	0.00	4.00	0.00	46.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	1	50.00	0.00	9.00	0.00	41.00
...................................................TCCATGAGACCATAACTTGTGA..........................................................................................................	22	1	50.00	0.00	0.00	0.00	50.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	50.00	0.00	17.00	0.00	33.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	49.00	0.00	0.00	0.00	49.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	48.00	0.00	10.00	0.00	38.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	47.00	0.00	6.00	0.00	41.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	45.00	0.00	12.00	0.00	33.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	45.00	0.00	9.00	0.00	36.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	45.00	0.00	7.00	0.00	38.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	43.00	0.00	15.00	0.00	28.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	42.00	0.00	11.00	0.00	31.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	41.00	0.00	5.00	0.00	36.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	41.00	0.00	8.00	0.00	33.00
...................................................TCCGTGAGACCCTAACTTGTGA..........................................................................................................	22	1	40.00	0.00	1.00	0.00	39.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	39.00	0.00	8.00	0.00	31.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	38.00	0.00	6.00	0.00	32.00
...................................................TCACTGAGACCATAACTTGTGA..........................................................................................................	22	1	38.00	0.00	0.00	0.00	38.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	37.00	0.00	8.00	0.00	29.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	37.00	1.00	6.00	0.00	30.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	36.00	0.00	11.00	0.00	25.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	35.00	0.00	13.00	0.00	22.00
...................................................TCCCTGAGACCCTAACxTGTGA..........................................................................................................	21	1	34.00	0.00	1.00	0.00	33.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	34.00	0.00	4.00	0.00	30.00
...................................................TCCCTGAGAACCTAACTTGTG...........................................................................................................	21	1	32.00	0.00	2.00	0.00	30.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	31.00	0.00	5.00	0.00	26.00
...................................................TCCCTGAGAxCCTAACTTGTGA..........................................................................................................	21	1	31.00	0.00	3.00	0.00	28.00
...................................................TCCCTGAGACCCTAAATTGTG...........................................................................................................	21	1	31.00	0.00	1.00	0.00	30.00
...................................................TCCCTGAAACCCTAACTTGTGA..........................................................................................................	22	1	30.00	0.00	4.00	0.00	26.00
...................................................TCCCTGAGACCCTAACTTTT............................................................................................................	20	1	30.00	0.00	1.00	0.00	29.00
...................................................TCCCTGAGAACCTAACTTGT............................................................................................................	20	1	28.00	0.00	0.00	0.00	28.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	27.00	0.00	2.00	0.00	25.00
...................................................TCTCTGAGACCCTAACTTGTG...........................................................................................................	21	1	26.00	0.00	3.00	0.00	23.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	26.00	0.00	5.00	0.00	21.00
...................................................TCCCTGAGACCCTAAATTGT............................................................................................................	20	1	24.00	0.00	1.00	0.00	23.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	24.00	0.00	6.00	0.00	18.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	24.00	0.00	2.00	0.00	22.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	1	23.00	0.00	16.00	0.00	7.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	23.00	0.00	4.00	0.00	19.00
..................................................CTCCCTGAGACCCTAACTTGT............................................................................................................	21	1	22.00	0.00	1.00	0.00	21.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	22.00	0.00	18.00	0.00	4.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	1	22.00	0.00	15.00	0.00	7.00
...................................................TCCCTGAGACCCTAACTTGTGAG.........................................................................................................	23	1	22.00	0.00	4.00	0.00	18.00

droEug1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGA------------------------AAA--ATAAACAAAGGC

Size

Hit Count

Total Norm

droBia1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC

Size

Hit Count

Total Norm

droTak1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAACAA-----AGGC

Size

Hit Count

Total Norm

droEle1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAAGAAAACCCAGGC

Size

Hit Count

Total Norm

droRho1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA--AA--CAAAGGC

Size

Hit Count

Total Norm

droFic1

AA-----TATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAA---------AGGC

Size

Hit Count

Total Norm

droKik1

A------TATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCAA------------------------AAAAAGTA-----AGAT

Size

Hit Count

Total Norm

droAna3

AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAC------------------------AAAA---------AAGA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	18569.00	491.00	11463.00	6612.00	3.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	11835.00	38.00	11020.00	777.00	0.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	5093.00	182.00	3387.00	1523.00	1.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	789.00	4.00	700.00	85.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	198.00	1.00	131.00	66.00	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	151.00	6.00	120.00	25.00	0.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	139.00	1.00	108.00	30.00	0.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	135.00	0.00	75.00	60.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	127.00	41.00	52.00	34.00	0.00
...................................................TCCATGAGACCCTAACTTGT............................................................................................................	20	1	117.00	1.00	114.00	2.00	0.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	1	115.00	0.00	109.00	6.00	0.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	114.00	2.00	70.00	42.00	0.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	91.00	1.00	84.00	5.00	1.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	87.00	3.00	67.00	17.00	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	84.00	7.00	63.00	14.00	0.00
...................................................TCCCTGAGACCATAACTTGT............................................................................................................	20	1	83.00	3.00	80.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	79.00	1.00	60.00	18.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	75.00	0.00	7.00	68.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	74.00	0.00	9.00	65.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	72.00	6.00	60.00	6.00	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	65.00	3.00	54.00	8.00	0.00
...................................................TCCCTTAGACCCTAACTTGTGA..........................................................................................................	22	1	64.00	0.00	61.00	3.00	0.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	58.00	0.00	13.00	45.00	0.00
...................................................TCCCTTAGACCCTAACTTGT............................................................................................................	20	1	57.00	0.00	57.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	55.00	2.00	38.00	15.00	0.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	54.00	0.00	46.00	8.00	0.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	50.00	4.00	23.00	23.00	0.00
...................................................TCCATGAGACCCTAACTTGTG...........................................................................................................	21	1	46.00	3.00	35.00	8.00	0.00
...................................................TCCCTGATACCCTAACTTGT............................................................................................................	20	1	44.00	0.00	42.00	2.00	0.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	1	41.00	2.00	31.00	8.00	0.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	39.00	1.00	2.00	36.00	0.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	38.00	0.00	21.00	17.00	0.00
...................................................TCCCTGAGACACTAACTTGT............................................................................................................	20	1	36.00	0.00	33.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	33.00	1.00	29.00	3.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	32.00	0.00	4.00	28.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	31.00	0.00	14.00	17.00	0.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	29.00	0.00	19.00	10.00	0.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	29.00	0.00	13.00	16.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	28.00	0.00	23.00	5.00	0.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	28.00	0.00	9.00	19.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	27.00	0.00	16.00	11.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	26.00	0.00	7.00	19.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	26.00	1.00	10.00	15.00	0.00
...................................................TCGCTGAGACCCTAACTTGT............................................................................................................	20	1	26.00	0.00	25.00	1.00	0.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	25.00	1.00	12.00	12.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	25.00	2.00	14.00	9.00	0.00
...................................................TCCCTGAGACCCTAGCTTGT............................................................................................................	20	1	24.00	0.00	18.00	6.00	0.00
...................................................TCCCTGATACCCTAACTTGTG...........................................................................................................	21	1	24.00	1.00	19.00	4.00	0.00
...................................................GCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	23.00	0.00	2.00	21.00	0.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	23.00	0.00	17.00	6.00	0.00
...................................................TCCCTGAGACCCTAACTTGA............................................................................................................	20	1	23.00	0.00	22.00	1.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	22.00	3.00	9.00	10.00	0.00
...................................................TCCCTTAGACCCTAACTTGTG...........................................................................................................	21	1	22.00	0.00	20.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	21.00	1.00	13.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	21.00	0.00	1.00	20.00	0.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	21.00	0.00	12.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	21.00	0.00	15.00	6.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	21.00	0.00	4.00	17.00	0.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	20.00	1.00	6.00	13.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	19.00	0.00	9.00	10.00	0.00
...................................................TCCCTGAGACCATAACTTGTG...........................................................................................................	21	1	19.00	1.00	16.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	19.00	1.00	3.00	15.00	0.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	19.00	0.00	15.00	4.00	0.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	19.00	0.00	5.00	14.00	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	18.00	0.00	2.00	16.00	0.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	1	17.00	1.00	13.00	3.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	17.00	0.00	9.00	8.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	17.00	0.00	13.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	17.00	0.00	12.00	5.00	0.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	1	16.00	0.00	12.00	4.00	0.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	16.00	0.00	9.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTTT............................................................................................................	20	1	16.00	0.00	13.00	3.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	16.00	6.00	8.00	2.00	0.00
...................................................TCCCGGAGACCCTAACTTGTGA..........................................................................................................	22	1	15.00	0.00	2.00	13.00	0.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	15.00	1.00	12.00	2.00	0.00
...................................................TCCCTGAGGCCCTAACTTGT............................................................................................................	20	1	15.00	0.00	14.00	1.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	7.00	7.00	0.00
...................................................TCCCCGAGACCCTAACTTGTG...........................................................................................................	21	1	14.00	0.00	9.00	5.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	14.00	0.00	10.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	14.00	0.00	11.00	3.00	0.00
...................................................TCTCTGAGACCCTAACTTGT............................................................................................................	20	1	13.00	0.00	12.00	1.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	13.00	2.00	4.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGTT.........................................................................................................	23	1	13.00	0.00	13.00	0.00	0.00
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	1	13.00	0.00	0.00	13.00	0.00
...................................................TCCCTGAGACCATAACTTGTGT..........................................................................................................	22	1	13.00	1.00	12.00	0.00	0.00
...................................................TCCCCGAGACCCTAACTTGT............................................................................................................	20	1	13.00	0.00	11.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGAGA..........................................................................................................	22	1	12.00	0.00	1.00	11.00	0.00
...................................................TCCCTGAGACCTTAACTTGT............................................................................................................	20	1	12.00	0.00	10.00	2.00	0.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	12.00	0.00	2.00	10.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	1	12.00	0.00	1.00	11.00	0.00
...................................................TCCCTGAGACCCTAACATGTGA..........................................................................................................	22	1	12.00	0.00	1.00	10.00	1.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	1	12.00	0.00	0.00	12.00	0.00
...................................................TCCCTGAGAACCTAACTTGT............................................................................................................	20	1	12.00	0.00	12.00	0.00	0.00
...................................................TCCCTGAGACCCCAACTTGT............................................................................................................	20	1	11.00	0.00	11.00	0.00	0.00
...................................................TCCCTGAGAACCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	7.00	4.00	0.00
...................................................CCCCTGAGACCCTAACTTGT............................................................................................................	20	1	11.00	0.00	11.00	0.00	0.00
...................................................TCCCTGAGACCCTAACCTGT............................................................................................................	20	1	11.00	0.00	11.00	0.00	0.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	0.00	11.00	0.00
...................................................TCCCTGAGACCCGAACTTGTGA..........................................................................................................	22	1	11.00	2.00	0.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	11.00	1.00	7.00	3.00	0.00

droBip1

AA-----TATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAA------------------------AAAAGATA-----AAGC

Size

Hit Count

Total Norm

dp4

AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAAAAAA-----AAGC	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	8594.00	1023.00	13.00	7550.00	8.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	2489.00	239.00	0.00	2246.00	4.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	1175.00	84.00	0.00	1091.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	142.00	22.00	0.00	120.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	66.00	1.00	0.00	64.00	1.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	59.00	28.00	0.00	30.00	1.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	54.00	10.00	0.00	44.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	54.00	9.00	0.00	45.00	0.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	34.00	0.00	0.00	34.00	0.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	34.00	0.00	0.00	34.00	0.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	29.00	0.00	0.00	28.00	1.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	26.00	1.00	0.00	25.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	25.00	1.00	0.00	24.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	19.00	0.00	0.00	19.00	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	18.00	4.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	18.00	2.00	1.00	15.00	0.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	13.00	5.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	13.00	0.00	0.00	13.00	0.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	12.00	0.00	0.00	12.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	1	11.00	0.00	0.00	11.00	0.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	11.00	3.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	11.00	1.00	0.00	10.00	0.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	0.00	11.00	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	0.00	11.00	0.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	10.00	0.00	0.00	10.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	10.00	1.00	0.00	8.00	1.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	10.00	1.00	0.00	9.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	10.00	8.00	0.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	10.00	1.00	0.00	9.00	0.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	0.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	9.00	2.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAACCTGTG...........................................................................................................	21	1	9.00	0.00	0.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	9.00	1.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	9.00	2.00	0.00	7.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	9.00	1.00	0.00	8.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	0.00	9.00	0.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	0.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	8.00	0.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	8.00	0.00	0.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	8.00	2.00	0.00	6.00	0.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	8.00	1.00	0.00	7.00	0.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	8.00	0.00	0.00	8.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	8.00	1.00	0.00	7.00	0.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	7.00	1.00	0.00	6.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	7.00	2.00	0.00	5.00	0.00
...................................................TCCCTGTGACCCTAACTTGTGA..........................................................................................................	22	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	7.00	1.00	0.00	6.00	0.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	1	7.00	0.00	0.00	7.00	0.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTTCTG...........................................................................................................	21	1	7.00	0.00	0.00	7.00	0.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	7.00	0.00	0.00	7.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	6.00	0.00	1.00	5.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	6.00	1.00	0.00	5.00	0.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	6.00	0.00	0.00	6.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	6.00	0.00	0.00	6.00	0.00
...................................................TCTCTGAGACCCTAACTTGTG...........................................................................................................	21	1	6.00	0.00	0.00	6.00	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	6.00	1.00	0.00	5.00	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	5.00	1.00	0.00	4.00	0.00
...................................................TCGCTGAGACCCTAACTTGT............................................................................................................	20	1	5.00	0.00	0.00	5.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAG.........................................................................................................	23	1	5.00	0.00	0.00	5.00	0.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	5.00	0.00	0.00	4.00	1.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	1	5.00	0.00	0.00	5.00	0.00
...................................................CCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	5.00	1.00	0.00	4.00	0.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	5.00	0.00	0.00	5.00	0.00
...................................................TCCCTTAGACCCTAACTTGTGA..........................................................................................................	22	1	5.00	0.00	0.00	5.00	0.00
...................................................TCCCTGAGACCCTTACTTGTGA..........................................................................................................	22	1	5.00	0.00	1.00	4.00	0.00
...................................................TCGCTGAGACCCTAACTTGTG...........................................................................................................	21	1	5.00	0.00	0.00	5.00	0.00
...................................................TCCCTGAGACCCTAACGTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TGCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGGGACCCTAACTTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	0.00	4.00	0.00
...................................................TTCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	1	4.00	1.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTACCTTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTCACTTGC............................................................................................................	20	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCCAACTTGTG...........................................................................................................	21	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	1	4.00	1.00	0.00	3.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	4.00	0.00	0.00	4.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGC..........................................................................................................	22	1	4.00	0.00	0.00	4.00	0.00
...................................................TACCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCACTGAGACCCTAACTTGTGC..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAAATTGTG...........................................................................................................	21	1	3.00	1.00	0.00	2.00	0.00
...................................................TCCCTGAGAGCCTAACTTGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAACATGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGAGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCAGAGACCCTAACTTGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TACCTGAGACACTAACTTGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTCGTG...........................................................................................................	21	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACACTAACTTGTG...........................................................................................................	21	1	3.00	0.00	0.00	3.00	0.00
...................................................GCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGT......................................................................	19	1	3.00	0.00	0.00	2.00	1.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	3.00	0.00	0.00	3.00	0.00
...................................................TCCCTGAGACCCTGACTTGTG...........................................................................................................	21	1	3.00	0.00	0.00	3.00	0.00

droPer1

AG-----TATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TAC------------------------AAAA-AAA-----AAGC	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	7161.67	186.67	0.67	2988.67	3985.33	0.33
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	3	1509.00	28.67	0.00	696.33	784.00	0.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	3	789.67	18.33	0.00	339.00	432.33	0.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	3	101.67	3.00	0.00	31.67	67.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	3	67.33	1.67	0.00	30.00	35.67	0.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	3	63.67	0.00	0.00	20.33	43.33	0.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	3	56.67	0.00	0.00	31.33	25.33	0.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	3	46.67	0.00	0.00	13.67	33.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	3	35.67	7.00	0.00	7.67	21.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	3	26.67	0.00	0.00	9.00	17.67	0.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	3	26.00	0.00	0.00	6.67	19.33	0.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	3	25.33	0.00	0.00	11.33	14.00	0.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	3	22.67	0.00	0.00	5.33	17.33	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	22.00	0.00	0.00	3.67	18.33	0.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	3	21.33	0.33	0.00	5.67	15.33	0.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	3	20.00	0.00	0.00	1.33	18.67	0.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	3	16.67	0.33	0.00	10.67	5.67	0.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	3	14.00	0.00	0.00	3.33	10.67	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	3	13.67	0.00	0.00	5.00	8.67	0.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	3	12.67	0.00	0.00	2.67	10.00	0.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	3	12.67	0.00	0.00	3.00	9.67	0.00
...................................................TCCCGGAGACCCTAACTTGTGA..........................................................................................................	22	3	12.67	0.00	0.00	1.33	11.33	0.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	3	12.33	0.00	0.00	2.67	9.67	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	3	12.33	0.00	0.00	7.33	5.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	11.67	0.00	0.00	3.00	8.67	0.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	3	11.67	0.00	0.00	4.33	7.33	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	3	11.67	0.00	0.00	4.33	7.33	0.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	3	11.33	0.67	0.00	2.00	8.67	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	3	10.67	0.00	0.00	2.33	8.33	0.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	3	10.67	0.00	0.00	3.00	7.67	0.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	3	10.00	0.33	0.00	2.33	7.33	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	3	10.00	0.00	0.00	3.67	6.33	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	3	9.67	0.00	0.00	3.00	6.67	0.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	3	9.67	1.67	0.00	4.67	3.33	0.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	3	9.67	0.00	0.00	0.67	9.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	3	9.33	2.00	0.00	1.33	6.00	0.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	3	9.33	0.00	0.00	1.67	7.67	0.00
...................................................GCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	9.00	0.00	0.00	1.33	7.67	0.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	3	9.00	0.00	0.00	7.33	1.67	0.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	9.00	0.33	0.00	1.33	7.33	0.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	3	8.67	0.67	0.00	1.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	3	8.33	0.00	0.00	1.33	7.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	3	8.00	0.00	0.00	1.67	6.33	0.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	3	8.00	0.00	0.00	1.67	6.33	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	3	7.67	0.00	0.00	2.33	5.33	0.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	3	7.67	0.00	0.00	2.67	5.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	3	7.67	0.00	0.00	1.00	6.67	0.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	7.33	0.00	0.00	4.67	2.67	0.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	3	7.33	0.00	0.00	4.00	3.33	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	3	7.33	0.00	0.00	3.00	4.33	0.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	3	7.33	0.67	0.00	1.67	5.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	6.67	0.00	0.00	3.33	3.33	0.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	3	6.33	0.00	0.00	1.00	5.33	0.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	6.33	0.00	0.00	1.00	5.33	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	3	6.33	0.00	0.00	4.67	1.67	0.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	3	6.33	0.00	0.00	1.67	4.67	0.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	3	6.00	0.00	0.00	3.00	3.00	0.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	3	6.00	0.00	0.00	2.33	3.67	0.00
...................................................TCCCTGAGACGCTAACTTGTGA..........................................................................................................	22	3	5.67	0.00	0.00	0.33	5.33	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	3	5.67	0.00	0.00	2.33	3.33	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	3	5.67	0.33	0.00	1.67	3.67	0.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	3	5.33	0.00	0.00	1.00	4.33	0.00
...................................................TCCCTGAGACCCTAACTTGAGA..........................................................................................................	22	3	5.33	0.00	0.00	3.33	2.00	0.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	3	5.33	0.00	0.00	0.33	5.00	0.00
...................................................TCCCTGAGACCCTCACTTGT............................................................................................................	20	3	5.33	0.00	0.00	1.00	4.33	0.00
...................................................TCCCTGAGACCCTAACATGTGA..........................................................................................................	22	3	5.33	0.00	0.00	1.67	3.67	0.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	3	5.33	0.00	0.00	3.33	2.00	0.00
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	3	5.33	0.00	0.00	0.67	4.67	0.00
...................................................TCCCTGAGACCCTAACCTGTG...........................................................................................................	21	3	5.00	0.00	0.00	2.67	2.33	0.00
...................................................TCCCTGAGAGCCTAACTTGTGA..........................................................................................................	22	3	5.00	0.00	0.00	0.33	4.67	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	3	5.00	0.00	0.00	1.00	3.33	0.67
...................................................TCCCTGTGACCCTAACTTGTGA..........................................................................................................	22	3	5.00	0.00	0.00	1.33	3.67	0.00
...................................................TCCCTGAGACCCTACCTTGTG...........................................................................................................	21	3	5.00	0.00	0.00	1.33	3.67	0.00
...................................................TCCCTGAGACCCTAACTTCTG...........................................................................................................	21	3	5.00	0.00	0.00	2.00	3.00	0.00
...................................................TCCCTGAGACCCTTACTTGTGA..........................................................................................................	22	3	5.00	0.00	0.00	0.67	4.33	0.00
...................................................TGCCTGAGACCCTAACTTGTGA..........................................................................................................	22	3	4.67	0.00	0.00	0.33	4.33	0.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	3	4.67	0.00	0.00	1.33	3.33	0.00
...................................................TCCCTGAGACCCTAATTTGTGA..........................................................................................................	22	3	4.67	0.00	0.00	3.33	1.33	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	3	4.67	0.00	0.00	2.00	2.67	0.00
...................................................TCCCAGAGACCCTAACTTGTGA..........................................................................................................	22	3	4.33	0.00	0.00	0.67	3.67	0.00
...................................................TCCCTGAGACACTAACTTGTG...........................................................................................................	21	3	4.33	0.00	0.00	1.33	3.00	0.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	3	4.33	0.00	0.00	1.33	3.00	0.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	3	4.33	0.00	0.00	1.33	3.00	0.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	3	4.33	0.00	0.00	1.00	3.33	0.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	3	4.33	0.00	0.00	0.67	3.67	0.00
...................................................TCCCTGAGACCCTAACGTGTG...........................................................................................................	21	3	4.00	0.00	0.00	1.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	3	4.00	0.00	0.00	1.00	3.00	0.00
...................................................TCCGTGAGACCCTAACTTGTGA..........................................................................................................	22	3	4.00	0.00	0.00	0.33	3.67	0.00
...................................................TCCCTGAGACCCGAACTTGTGA..........................................................................................................	22	3	4.00	0.00	0.00	0.67	3.33	0.00
...................................................TCCCTGAGGCCCTAACTTGTG...........................................................................................................	21	3	4.00	0.00	0.00	0.67	3.33	0.00
...................................................TCCCTGGGACCCTAACTTGTG...........................................................................................................	21	3	3.67	0.00	0.00	2.00	1.67	0.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	3	3.67	0.00	0.00	0.67	3.00	0.00
...................................................TCCCTGAGACCCTACCTTGT............................................................................................................	20	3	3.67	0.00	0.00	1.67	2.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTG...........................................................................................................	21	3	3.67	0.00	0.00	0.00	3.67	0.00
...................................................TCCCTGAGACCCTCACTTGTGC..........................................................................................................	22	3	3.67	0.00	0.00	0.67	3.00	0.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	3	3.67	0.00	0.00	0.33	3.33	0.00
...................................................TCCCTGAGACCCTAACTGGCGA..........................................................................................................	22	3	3.33	0.00	0.00	1.00	2.33	0.00
...................................................TCCCTGAGACCCTAACTTTTG...........................................................................................................	21	3	3.33	0.00	0.00	1.00	2.33	0.00
...................................................TCCCTGTGACCCTAACTTGTG...........................................................................................................	21	3	3.33	0.00	0.00	1.33	2.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGC..........................................................................................................	22	3	3.33	0.00	0.00	1.67	1.67	0.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	3	3.00	0.00	0.00	1.00	2.00	0.00

droWil1

AT-----TATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------------------AAA------------GC	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	26005.00	1269.00	387.00	18756.00	5593.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	8379.00	73.00	17.00	8196.00	93.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	8332.00	256.00	33.00	7091.00	952.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	1523.00	23.00	11.00	223.00	1266.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	1517.00	14.00	17.00	332.00	1154.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	904.00	0.00	0.00	17.00	887.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	866.00	1.00	0.00	44.00	821.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	501.00	5.00	1.00	488.00	7.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	469.00	1.00	0.00	17.00	451.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	407.00	2.00	0.00	138.00	267.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	367.00	0.00	0.00	10.00	357.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	233.00	12.00	5.00	195.00	21.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	200.00	1.00	0.00	11.00	188.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	188.00	2.00	0.00	16.00	170.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	161.00	0.00	0.00	5.00	156.00
...................................................TCCCTGAGACCCTAACTTGTGACTTTT.....................................................................................................	27	1	99.00	0.00	0.00	11.00	88.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	91.00	1.00	1.00	86.00	3.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	86.00	2.00	1.00	75.00	8.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	74.00	0.00	0.00	16.00	58.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	67.00	1.00	0.00	65.00	1.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	65.00	0.00	1.00	64.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	64.00	0.00	0.00	61.00	3.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	64.00	0.00	0.00	62.00	2.00
...................................................TCCCTGAGACCCTAACTTGA............................................................................................................	20	1	62.00	4.00	2.00	56.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGT......................................................................	21	1	61.00	1.00	0.00	6.00	54.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	60.00	0.00	1.00	59.00	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	58.00	0.00	2.00	56.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	54.00	1.00	11.00	19.00	23.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	54.00	2.00	0.00	51.00	1.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	54.00	1.00	0.00	51.00	2.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	48.00	6.00	1.00	34.00	7.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	47.00	0.00	1.00	34.00	12.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	45.00	0.00	0.00	33.00	12.00
...................................................TCCCTGAAACCCTAACTTGTGA..........................................................................................................	22	1	44.00	1.00	1.00	39.00	3.00
..........................................................................................ACAAGTTTTGATCTCCGGTA.....................................................................	20	1	41.00	0.00	0.00	5.00	36.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	40.00	0.00	0.00	39.00	1.00
........................................................................................TCACAAGTTTTGATCTCCGGTA.....................................................................	22	1	37.00	0.00	0.00	6.00	31.00
...................................................TCCCTGAGACCCTAACTTGTGACC........................................................................................................	24	1	37.00	0.00	0.00	0.00	37.00
...................................................CCCCTGAGACCCTAACTTGT............................................................................................................	20	1	37.00	0.00	0.00	37.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	36.00	0.00	0.00	30.00	6.00
..........................................................................................ACAAGTTTTGATCTCCGGTAC....................................................................	21	1	36.00	0.00	0.00	1.00	35.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	35.00	4.00	0.00	26.00	5.00
....................................................TCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	34.00	0.00	0.00	33.00	1.00
...................................................CCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	34.00	0.00	0.00	33.00	1.00
.......................................................TGAGACCCTAACTTGTGA..........................................................................................................	18	1	34.00	0.00	0.00	6.00	28.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	34.00	0.00	1.00	32.00	1.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	32.00	1.00	0.00	30.00	1.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	32.00	0.00	0.00	29.00	3.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	31.00	0.00	0.00	28.00	3.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	31.00	0.00	0.00	31.00	0.00
...................................................TCCCTGAGACACTAACTTGTG...........................................................................................................	21	1	31.00	0.00	0.00	31.00	0.00
...................................................GCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	31.00	0.00	0.00	31.00	0.00
...................................................TCCCTGAGACCATAACTTGT............................................................................................................	20	1	31.00	0.00	0.00	31.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	31.00	0.00	0.00	30.00	1.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	30.00	0.00	0.00	30.00	0.00
...................................................TCCCTGAAACCCTAACTTGT............................................................................................................	20	1	29.00	0.00	0.00	29.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	29.00	2.00	0.00	25.00	2.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	28.00	1.00	0.00	16.00	11.00
...................................................TCCCTGAGACCATAACTTGTG...........................................................................................................	21	1	27.00	0.00	0.00	27.00	0.00
...................................................TCCCTGAGAACCTAACTTGTG...........................................................................................................	21	1	27.00	0.00	0.00	27.00	0.00
...................................................TCCCTGAGACCCTAAATTGT............................................................................................................	20	1	26.00	0.00	0.00	26.00	0.00
...................................................TCCCTGAGACCCTAATTTGTGA..........................................................................................................	22	1	25.00	1.00	0.00	24.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	24.00	2.00	0.00	18.00	4.00
...................................................TCCATGAGACCCTAACTTGT............................................................................................................	20	1	24.00	0.00	0.00	24.00	0.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	23.00	3.00	2.00	17.00	1.00
...................................................TCCCTTAGACCCTAACTTGTGA..........................................................................................................	22	1	23.00	0.00	0.00	20.00	3.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	22.00	2.00	0.00	15.00	5.00
...................................................TCCCTGAGACACTAACTTGT............................................................................................................	20	1	22.00	0.00	0.00	22.00	0.00
...................................................TCCCTGAGAACCTAACTTGT............................................................................................................	20	1	22.00	0.00	0.00	22.00	0.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	21.00	0.00	0.00	20.00	1.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	21.00	0.00	1.00	17.00	3.00
...................................................TACCTGAGACCCTAACTTGTG...........................................................................................................	21	1	20.00	0.00	0.00	19.00	1.00
....................................................CCCTGAGACCCTAACTTGT............................................................................................................	19	1	20.00	0.00	0.00	19.00	1.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	19.00	2.00	0.00	4.00	13.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	19.00	1.00	0.00	15.00	3.00
....................................................CCCTGAGACCCTAACTTGTG...........................................................................................................	20	1	19.00	0.00	0.00	12.00	7.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	19.00	1.00	0.00	17.00	1.00
..........................................................................................ACAGGTTTTGATCTCCGGTAT....................................................................	21	1	19.00	0.00	0.00	3.00	16.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	18.00	0.00	1.00	15.00	2.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	18.00	0.00	2.00	16.00	0.00
...................................................TCCCTGAAACCCTAACTTGTG...........................................................................................................	21	1	18.00	0.00	0.00	18.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	18.00	1.00	0.00	14.00	3.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	1	18.00	0.00	0.00	18.00	0.00
.........................................................................................CACAAGTTTTGATCTCCGGTAT....................................................................	22	1	18.00	0.00	0.00	1.00	17.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	18.00	0.00	0.00	17.00	1.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	18.00	0.00	0.00	18.00	0.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	18.00	1.00	0.00	14.00	3.00
...................................................TCCCTGAGACCCAAACTTGTGA..........................................................................................................	22	1	18.00	0.00	0.00	12.00	6.00
...................................................TCCCTGAGAxCCTAACTTGTGA..........................................................................................................	21	1	18.00	0.00	1.00	17.00	0.00
...................................................TCCCTGAGACCCTAAATTGTG...........................................................................................................	21	1	17.00	0.00	0.00	17.00	0.00
...................................................TCCCTGATACCCTAACTTGT............................................................................................................	20	1	17.00	0.00	0.00	17.00	0.00
...................................................ACCCTGAGACCCTAACTTGT............................................................................................................	20	1	17.00	1.00	0.00	16.00	0.00
...................................................TCCCTGAGACCCTAACTTATG...........................................................................................................	21	1	17.00	0.00	0.00	17.00	0.00
...................................................TCCCTGACACCCTAACTTGT............................................................................................................	20	1	17.00	0.00	0.00	17.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	16.00	0.00	0.00	12.00	4.00
...................................................TCCATGAGACCCTAACTTGTG...........................................................................................................	21	1	16.00	1.00	0.00	15.00	0.00
...................................................TCCCTGAGACCCTAACTT..............................................................................................................	18	1	15.00	1.00	0.00	14.00	0.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	15.00	1.00	0.00	14.00	0.00
...................................................TCCCTGAGACCCTAACxTGTGA..........................................................................................................	21	1	15.00	0.00	0.00	15.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	14.00	2.00	0.00	12.00	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	14.00	1.00	0.00	10.00	3.00

droVir3

TATTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAAA--ATA-----AGAA	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	14011.00	1526.00	10928.00	7.00	748.00	802.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	4119.00	326.00	3369.00	2.00	135.00	287.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	1718.00	163.00	1502.00	0.00	13.00	40.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	375.00	2.00	18.00	0.00	180.00	175.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	351.00	22.00	79.00	0.00	118.00	132.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	214.00	63.00	46.00	0.00	23.00	82.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	202.00	1.00	101.00	0.00	39.00	61.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	155.00	4.00	147.00	0.00	2.00	2.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	129.00	8.00	114.00	0.00	4.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	123.00	3.00	9.00	0.00	40.00	71.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	118.00	19.00	93.00	0.00	3.00	3.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	95.00	1.00	94.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	78.00	0.00	78.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	66.00	0.00	8.00	0.00	31.00	27.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	58.00	0.00	58.00	0.00	0.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	50.00	12.00	6.00	0.00	1.00	31.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	46.00	1.00	29.00	0.00	7.00	9.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	46.00	6.00	37.00	0.00	0.00	3.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	45.00	0.00	45.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTT.......................................................................................................	25	1	34.00	0.00	0.00	0.00	20.00	14.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	32.00	4.00	3.00	0.00	4.00	21.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	31.00	0.00	31.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	29.00	2.00	27.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	28.00	0.00	25.00	0.00	0.00	3.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	1	26.00	11.00	15.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACC........................................................................................................	24	1	25.00	0.00	0.00	0.00	12.00	13.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	25.00	5.00	20.00	0.00	0.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	24.00	1.00	22.00	0.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	24.00	0.00	24.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	23.00	1.00	22.00	0.00	0.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	23.00	2.00	6.00	0.00	6.00	9.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	22.00	1.00	16.00	0.00	2.00	3.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	22.00	1.00	21.00	0.00	0.00	0.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	22.00	0.00	22.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	1	21.00	0.00	21.00	0.00	0.00	0.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	21.00	0.00	21.00	0.00	0.00	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	20.00	0.00	20.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	1	20.00	0.00	20.00	0.00	0.00	0.00
...................................................TCCCTGAGAGCCTAACTTGTGA..........................................................................................................	22	1	19.00	0.00	19.00	0.00	0.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTG...........................................................................................................	21	1	18.00	0.00	12.00	0.00	5.00	1.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	17.00	0.00	17.00	0.00	0.00	0.00
....................................................CCCTGAGACCCTAACTTGTGA..........................................................................................................	21	1	17.00	1.00	9.00	0.00	0.00	7.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	16.00	0.00	16.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	16.00	1.00	15.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	1	15.00	0.00	15.00	0.00	0.00	0.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	15.00	0.00	15.00	0.00	0.00	0.00
.......................................................TGAGACCCTAACTTGTGA..........................................................................................................	18	1	14.00	1.00	4.00	0.00	2.00	7.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTTACTTGTGA..........................................................................................................	22	1	14.00	0.00	14.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCGAACTTGTGA..........................................................................................................	22	1	14.00	1.00	13.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTACCTTGTG...........................................................................................................	21	1	14.00	2.00	12.00	0.00	0.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	1	13.00	0.00	12.00	0.00	0.00	1.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	13.00	1.00	12.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	13.00	0.00	13.00	0.00	0.00	0.00
...................................................TCCCTGCGACCCTAACTTGTG...........................................................................................................	21	1	13.00	0.00	12.00	0.00	0.00	1.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	12.00	3.00	9.00	0.00	0.00	0.00
...................................................TCCCTCAGACCCTAACTTGCGA..........................................................................................................	22	1	12.00	0.00	12.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTAGTGA..........................................................................................................	22	1	12.00	8.00	4.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACATGTGA..........................................................................................................	22	1	12.00	3.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACTTT......................................................................................................	26	1	12.00	0.00	1.00	0.00	5.00	6.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	12.00	0.00	11.00	0.00	1.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	12.00	1.00	10.00	0.00	0.00	1.00
...................................................TCCCTCAGACCCTAACTTGTG...........................................................................................................	21	1	12.00	0.00	12.00	0.00	0.00	0.00
...................................................TCCCTGAGAACCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	10.00	0.00	0.00	1.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	2.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	11.00	2.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	11.00	0.00	11.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	11.00	2.00	6.00	0.00	0.00	3.00
...................................................TCCCTGAGACCCTAACTTGCGT..........................................................................................................	22	1	11.00	0.00	11.00	0.00	0.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTG...........................................................................................................	21	1	11.00	0.00	11.00	0.00	0.00	0.00
...................................................ACCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	1.00	9.00	0.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTCTGA..........................................................................................................	22	1	11.00	0.00	11.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGC..........................................................................................................	22	1	10.00	0.00	10.00	0.00	0.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTGG..........................................................................................................	22	1	10.00	0.00	1.00	0.00	5.00	4.00
...................................................TCCCTGAGACCCTAACTCGTG...........................................................................................................	21	1	10.00	0.00	10.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	10.00	1.00	8.00	0.00	0.00	1.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	10.00	1.00	8.00	0.00	0.00	1.00
...................................................TCCCTGAGACCCTATCTTGCGA..........................................................................................................	22	1	10.00	0.00	10.00	0.00	0.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	10.00	2.00	6.00	0.00	0.00	2.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	10.00	0.00	10.00	0.00	0.00	0.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	10.00	1.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	10.00	0.00	10.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGCTA..........................................................................................................	22	1	10.00	0.00	10.00	0.00	0.00	0.00
...................................................CCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	10.00	0.00	9.00	0.00	0.00	1.00
...................................................TCCCTGATACCCTAACTTGTG...........................................................................................................	21	1	9.00	0.00	8.00	0.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	9.00	0.00	5.00	1.00	0.00	3.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	9.00	0.00	0.00	0.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	9.00	0.00	0.00	0.00
...................................................TGCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	9.00	0.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAG.........................................................................................................	23	1	9.00	1.00	3.00	0.00	5.00	0.00
...................................................TCCCTGAGACCCTAACTTCTG...........................................................................................................	21	1	9.00	0.00	9.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAC........................................................................................................	24	1	9.00	0.00	0.00	0.00	6.00	3.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	9.00	1.00	8.00	0.00	0.00	0.00
.........................................................................................CACAAGTTTTGATCTCCGGTAT....................................................................	22	1	9.00	4.00	1.00	0.00	2.00	2.00
...................................................GCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	9.00	2.00	7.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	9.00	0.00	9.00	0.00	0.00	0.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	8.00	0.00	8.00	0.00	0.00	0.00
...................................................TCCCTGCGACCCTCACTTGTGA..........................................................................................................	22	1	8.00	0.00	8.00	0.00	0.00	0.00
...................................................TCCCTGAGACCCTCACTTGT............................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	8.00	0.00	5.00	0.00	1.00	2.00
...................................................TCCCTGATACCCTAACTTGT............................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00

droMoj3

CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAA--GTA---------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	19568.00	1291.00	10611.00	7629.00	37.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	1	6098.00	86.00	3615.00	2397.00	0.00
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	1	3695.00	167.00	1903.00	1624.00	1.00
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	1	271.00	0.00	57.00	213.00	1.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	1	236.00	10.00	147.00	79.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGT..........................................................................................................	22	1	225.00	3.00	150.00	72.00	0.00
...................................................TCCCTGAGACCCTAACTTG.............................................................................................................	19	1	204.00	1.00	124.00	79.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	1	195.00	104.00	53.00	36.00	2.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	1	152.00	2.00	95.00	55.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGC..........................................................................................................	22	1	137.00	7.00	62.00	67.00	1.00
...................................................TCCCTGAGACCCTACCTTGTGA..........................................................................................................	22	1	136.00	0.00	43.00	93.00	0.00
...................................................TCCCTGAGACCCTCACTTGT............................................................................................................	20	1	83.00	1.00	14.00	68.00	0.00
...................................................TCCCTGAGACCCTAACTTGTTA..........................................................................................................	22	1	78.00	0.00	12.00	66.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGA..........................................................................................................	22	1	74.00	1.00	50.00	23.00	0.00
...................................................TCCCTGAGACCCTACCTTGT............................................................................................................	20	1	56.00	0.00	16.00	40.00	0.00
...................................................TCCCTGAGACCCTCACTTGTG...........................................................................................................	21	1	51.00	0.00	4.00	47.00	0.00
...................................................TCCCTGAGACCCTAACTTGTC...........................................................................................................	21	1	47.00	9.00	20.00	18.00	0.00
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	1	44.00	5.00	23.00	16.00	0.00
...................................................TCCCTGAGACCCTAACCTGTGA..........................................................................................................	22	1	41.00	0.00	20.00	21.00	0.00
...................................................TACCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	39.00	2.00	27.00	9.00	1.00
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	1	38.00	0.00	25.00	13.00	0.00
...................................................TCCCTGAGGCCCTAACTTGTGA..........................................................................................................	22	1	38.00	0.00	24.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	1	37.00	0.00	25.00	12.00	0.00
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	1	36.00	1.00	14.00	21.00	0.00
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	35.00	2.00	19.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTT...........................................................................................................	21	1	34.00	0.00	19.00	15.00	0.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	1	34.00	12.00	15.00	7.00	0.00
.....................................................CCTGAGACCCTAACTTGTG...........................................................................................................	19	1	34.00	0.00	19.00	15.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGTC.........................................................................................................	23	1	33.00	15.00	12.00	6.00	0.00
...................................................TCCCTGAGACACTAACTTGTGA..........................................................................................................	22	1	31.00	2.00	20.00	8.00	1.00
...................................................TCCCTGAGTCCCTAACTTGTGA..........................................................................................................	22	1	29.00	0.00	10.00	19.00	0.00
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	1	29.00	1.00	14.00	14.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAT.........................................................................................................	23	1	28.00	3.00	17.00	8.00	0.00
...................................................TCCCTGAGACCCTACCTTGTG...........................................................................................................	21	1	28.00	0.00	5.00	23.00	0.00
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	1	27.00	0.00	18.00	9.00	0.00
...................................................TCCCTGATACCCTAACTTGTGA..........................................................................................................	22	1	27.00	4.00	10.00	13.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGG..........................................................................................................	22	1	26.00	1.00	16.00	9.00	0.00
...................................................TCCCTGAGACCCTAAATTGTGA..........................................................................................................	22	1	26.00	0.00	13.00	13.00	0.00
.....................................................CCTGAGACCCTAACTTGT............................................................................................................	18	1	26.00	0.00	19.00	7.00	0.00
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	1	25.00	0.00	9.00	16.00	0.00
...................................................TCCCTGAGACCCTAACTTTTGA..........................................................................................................	22	1	23.00	1.00	7.00	15.00	0.00
...................................................TCCCTGAGACCCTCACTTGTGC..........................................................................................................	22	1	23.00	0.00	3.00	20.00	0.00
...................................................TCCCTGAGACCCTAACTTGC............................................................................................................	20	1	23.00	0.00	16.00	7.00	0.00
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	1	22.00	1.00	12.00	9.00	0.00
...................................................TCCCTGAGACCCTAGCTTGTGA..........................................................................................................	22	1	22.00	1.00	12.00	9.00	0.00
...................................................TCCCTAAGACCCTAACTTGTGA..........................................................................................................	22	1	22.00	0.00	5.00	17.00	0.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	19.00	2.00	11.00	6.00	0.00
...................................................TCCCTGAGACCCTAACTTGTAA..........................................................................................................	22	1	19.00	2.00	7.00	10.00	0.00
...................................................TCCCTGAGACCCTAACTTGGGA..........................................................................................................	22	1	19.00	0.00	12.00	7.00	0.00
...................................................TCCCTGAGACCCTAACGTGTGA..........................................................................................................	22	1	19.00	0.00	9.00	10.00	0.00
...................................................TCCCTGAGAACCTAACTTGTGA..........................................................................................................	22	1	19.00	0.00	10.00	9.00	0.00
...................................................TCCCTGAGACCCTGACTTGTGA..........................................................................................................	22	1	19.00	0.00	8.00	11.00	0.00
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	18.00	0.00	10.00	8.00	0.00
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	1	18.00	1.00	13.00	4.00	0.00
...................................................TCCCTGTGACCCTAACTTGTGA..........................................................................................................	22	1	18.00	0.00	11.00	7.00	0.00
..................................................CTCCCTGAGACCCTAACTTGTGA..........................................................................................................	23	1	17.00	2.00	8.00	7.00	0.00
...................................................TCCCTGAGACACTAACTTGT............................................................................................................	20	1	17.00	0.00	8.00	9.00	0.00
...................................................TCCCTGAGACCCTAACCTGT............................................................................................................	20	1	17.00	0.00	9.00	8.00	0.00
...................................................TCCATGAGACCCTAACTTGTGA..........................................................................................................	22	1	17.00	3.00	12.00	2.00	0.00
...................................................TCCCTGAGACCCTAACTTGCG...........................................................................................................	21	1	17.00	0.00	8.00	9.00	0.00
...................................................TCCCTGAGACCCTAACTGGT............................................................................................................	20	1	17.00	0.00	16.00	1.00	0.00
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	1	17.00	0.00	14.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTA...........................................................................................................	21	1	16.00	0.00	11.00	5.00	0.00
...................................................TCCCTGAGACCCTAACTTGTCA..........................................................................................................	22	1	16.00	0.00	9.00	7.00	0.00
...................................................TCCCTGAGACCCCAACTTGTGA..........................................................................................................	22	1	16.00	0.00	7.00	9.00	0.00
...................................................TCACTGAGACCCTAACTTGTG...........................................................................................................	21	1	16.00	1.00	12.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	1	15.00	1.00	9.00	5.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAAA........................................................................................................	24	1	15.00	0.00	8.00	7.00	0.00
...................................................TCCCTGAGACCCTAACTGGTG...........................................................................................................	21	1	15.00	0.00	10.00	5.00	0.00
...................................................TCCCTGAGAGCCTAACTTGTGA..........................................................................................................	22	1	14.00	0.00	10.00	4.00	0.00
...................................................TCCCTGAGTCCCTAACTTGT............................................................................................................	20	1	14.00	0.00	3.00	11.00	0.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	1	14.00	9.00	3.00	2.00	0.00
...................................................TCCCTGAGACCCTCCCTTGTGA..........................................................................................................	22	1	14.00	0.00	1.00	13.00	0.00
...................................................TCCCTGAGACCCTACCTTGTGC..........................................................................................................	22	1	14.00	0.00	5.00	9.00	0.00
...................................................TCACTGAGACCCTAACTTGT............................................................................................................	20	1	13.00	0.00	9.00	4.00	0.00
...................................................TCCCGGAGACCCTAACTTGTGA..........................................................................................................	22	1	13.00	0.00	10.00	3.00	0.00
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	1	13.00	0.00	5.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTCGT............................................................................................................	20	1	13.00	0.00	9.00	4.00	0.00
...................................................TACCTGAGACCCTAACTTGT............................................................................................................	20	1	13.00	0.00	8.00	5.00	0.00
...................................................TCCCTGAGTCCCTAACTTGTG...........................................................................................................	21	1	12.00	0.00	7.00	5.00	0.00
...................................................TCCCTGCGACCCTAACTTGTG...........................................................................................................	21	1	12.00	0.00	5.00	7.00	0.00
...................................................TCCCTGAGACCCTAAATTGT............................................................................................................	20	1	12.00	0.00	4.00	8.00	0.00
...................................................TCCCTGAGACCCTAACTTGCGC..........................................................................................................	22	1	12.00	0.00	5.00	7.00	0.00
...................................................TCCCTGAGACCCTGACTTGTG...........................................................................................................	21	1	12.00	1.00	5.00	6.00	0.00
...................................................TCCCTGAGACTCTAACTTGTGA..........................................................................................................	22	1	12.00	1.00	5.00	6.00	0.00
...................................................TCCTTGAGACCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	4.00	7.00	0.00
......................................................CTGAGACCCTAACTTGTGA..........................................................................................................	19	1	11.00	6.00	3.00	2.00	0.00
...................................................CCCCTGAGACCCTAACTTGT............................................................................................................	20	1	11.00	0.00	6.00	5.00	0.00
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	7.00	4.00	0.00
...................................................TCCCTGACACCCTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	5.00	6.00	0.00
...................................................TCCCTGAGACCCTAACTTTT............................................................................................................	20	1	11.00	0.00	5.00	6.00	0.00
...................................................TCCCTGAGACCTTAACTTGTGA..........................................................................................................	22	1	11.00	0.00	5.00	6.00	0.00
...................................................TCCCTGAGACCCTAACCTGTG...........................................................................................................	21	1	10.00	0.00	3.00	7.00	0.00
...................................................TCCCTGAGACCCTGACTTGT............................................................................................................	20	1	10.00	0.00	7.00	3.00	0.00
...................................................TTCCTGAGACCCTAACTTGTGA..........................................................................................................	22	1	10.00	2.00	3.00	5.00	0.00
.........................................................................................CACAAGTTTTGATCTCCGGTAT....................................................................	22	1	10.00	7.00	1.00	2.00	0.00
...................................................TCCCTGAGGCCCTAACTTGT............................................................................................................	20	1	10.00	0.00	7.00	3.00	0.00
...................................................TCCATGAGACCCTAACTTGT............................................................................................................	20	1	10.00	0.00	6.00	4.00	0.00
...................................................TCCCTGAGACCCTTACTTGTGA..........................................................................................................	22	1	10.00	0.00	2.00	8.00	0.00
...................................................TCCCTGAGAACCTAACTTGT............................................................................................................	20	1	10.00	0.00	9.00	1.00	0.00
...................................................TCCCTGAGACCCTAACTTGTGAC.........................................................................................................	23	1	9.00	0.00	7.00	2.00	0.00

droGri2

CA-----CATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA---------AAAC	Size	Hit Count	Total Norm	V109 Male body
...................................................TCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	2	169.50	169.50
...................................................TCCCTGAGACCCTAACTTGTG...........................................................................................................	21	2	34.00	34.00
..........................................................................................ACAAGTTTTGATCTCCGGTAT....................................................................	21	2	14.00	14.00
...................................................TCCCTGAGACCCTAACTTGT............................................................................................................	20	2	13.00	13.00
........................................................................................TCACAAGTTTTGATCTCCGGTAT....................................................................	23	2	4.00	4.00
.....................................................CCTGAGACCCTAACTTGTGA..........................................................................................................	20	2	3.50	3.50
...................................................TCCCTGAGACCCTAACTCGTGA..........................................................................................................	22	2	3.50	3.50
...................................................TCCCTGAGACCCTAACTAGTGA..........................................................................................................	22	2	2.50	2.50
.........................................................................................CACAAGTTTTGATCTCCGGTAT....................................................................	22	2	2.00	2.00
.......................................................................................TTCACAAGTTTTGATCTCCGGTAT....................................................................	24	2	1.50	1.50
...................................................TCCCTGAGCCCCTAACTTGTGA..........................................................................................................	22	2	1.00	1.00
...................................................TCTCTGAGACCCTAACTTGTGA..........................................................................................................	22	2	1.00	1.00
..........................................................................................ACAAGTTTTGATCTCCGGTATT...................................................................	22	2	1.00	1.00
...................................................TCCCTGAGACCCTAACTTGTGAA.........................................................................................................	23	2	1.00	1.00
...................................................TCCCTGAGACCCTAACTCGTG...........................................................................................................	21	2	0.50	0.50
...................................................TCGCTGAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCCTATCTTGTGA..........................................................................................................	22	2	0.50	0.50
..........................................................................................AAAAGTTTTGATCTCCGGTAT....................................................................	21	2	0.50	0.50
...................................................TCCCTGTGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
........................................................................................TCACAACTTTTGATCTCCGGTAT....................................................................	23	2	0.50	0.50
........................................................................................TCACAAGTCTTGATCTCCGGTAT....................................................................	23	2	0.50	0.50
...................................................TCCCTGAGACCCTAACTTATGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCCTAACxTGTGA..........................................................................................................	21	2	0.50	0.50
...................................................TCACTGAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCCTCACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCCTAACTTGTGACT........................................................................................................	24	2	0.50	0.50
...................................................TCCCTGAGATCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCATAACTTGTGA..........................................................................................................	22	2	0.50	0.50
..........................................................................................ACAAGTTTTGATCTACGGTAT....................................................................	21	2	0.50	0.50
...................................................TCCGTGAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................CCCCTGAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTCAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGGGACCCTAACTAGTGA..........................................................................................................	22	2	0.50	0.50
........................................................................................TCACAAGTTTTGATCTCCGGT......................................................................	21	2	0.50	0.50
...................................................TCCCTGAGACCCTAACTGGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGACCCTAACTAGTG...........................................................................................................	21	2	0.50	0.50
...................................................TCCCTGGGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCCGAGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50
...................................................TCCCTGAGTCCCTAACTTGT............................................................................................................	20	2	0.50	0.50
...................................................TCCCTGCGACCCTAACTTGTGA..........................................................................................................	22	2	0.50	0.50

Generated: 04/20/2012 at 05:20:18 EDT

dme-mir-125

chr2L:18472315-18472424 +

Known_mirbase

intergenic

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup