dme-mir-124- Best orthologs

dme-mir-124	chr2L:17566370-17566469 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 17566426-17566446
   star strand at position 17566392-17566414
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2L:17566355-17566484 +		1	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATA
droSim1	chr2L:17270490-17270619 +	LASTZ	1	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droSec1	super_7:1207305-1207434 +	LASTZ	1	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droYak2	chr2R:3533165-3533294 -	LASTZ	1	C-C----------------CAAG----------------TGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-TCTCA-------TA------CCCAATG
droEre2	scaffold_4845:6683953-6684082 -	LASTZ	1	C-C----------------CAAG----------------TGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droEug1	scf7180000409016:190114-190244 +	LASTZ	4	C-C----------------CAAG----------------TGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------GAT-----CTCAACT
droBia1	scf7180000302422:6140623-6140752 -	LASTZ	4	T-C----------------CAAG----------------TGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAGGA
droTak1	scf7180000415617:20661-20790 -	LASTZ	4	C-C----------------CAAG----------------TGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------ATTATAA
droEle1	scf7180000491046:269607-269743 +	LASTZ	4	C-C----------------CAAG----------------TGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTT-ACTCAAACAAAAAA------CAAAGCG
droRho1	scf7180000777709:22780-22908 +	LASTZ	4	C-C----------------CAAG----------------TGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AA------GCAAAT-
droFic1	scf7180000453855:351069-351204 +	LASTZ	4	C-C----------------CAAG----------------TGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AATCCAAGGAAGATA
droKik1	scf7180000302246:118938-119067 -	LASTZ	4	C-T----------------GAAG----------------TGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTT-ACTCAAAAATT-TA------ACTAAAA
droAna3	scaffold_12916:3309677-3309806 -	LASTZ	1	C-C----------------AGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACT-ACAAA-------TG------ACATATT
droBip1	scf7180000396737:1463499-1463626 +	LASTZ	4	C-C----------------TGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAT---CTCA-------AA------CGACATA
dp4	chr4_group3:10867616-10867737 -	LASTZ	1	T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA
droPer1	super_8:2078713-2078834 -	LASTZ	1	T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA
droWil1	scaffold_180764:940183-940306 -	LASTZ	1	T-T---------------CTCAG----------------A-------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAA--ACCAA-------AA------CGCAAAA
droVir3	scaffold_12963:16493143-16493272 +	LASTZ	1	G-ACAACATT---------------------------CGTGAGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTA-ACAAA------------------AATA
droMoj3	scaffold_6500:21419441-21419593 +	LASTZ	1	CGACAA--TTGCCCTGCGCTCAGCGTGCGGGACTCGCCGTGAGTGACGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAAT----------------------CCAACA
droGri2	scaffold_15252:13906813-13906947 +	LASTZ	1	G-T----------------GGTG----------------TGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCATTCA-------AATATA--ACCAGCA

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATA
droSim1	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droSec1	C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droYak2	C-C----------------CAAG----------------TGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-TCTCA-------TA------CCCAATG
droEre2	C-C----------------CAAG----------------TGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG
droEug1	C-C----------------CAAG----------------TGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------GAT-----CTCAACT
droBia1	T-C----------------CAAG----------------TGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAGGA
droTak1	C-C----------------CAAG----------------TGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------ATTATAA
droEle1	C-C----------------CAAG----------------TGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTT-ACTCAAACAAAAAA------CAAAGCG
droRho1	C-C----------------CAAG----------------TGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AA------GCAAAT-
droFic1	C-C----------------CAAG----------------TGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AATCCAAGGAAGATA
droKik1	C-T----------------GAAG----------------TGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTT-ACTCAAAAATT-TA------ACTAAAA
droAna3	C-C----------------AGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACT-ACAAA-------TG------ACATATT
droBip1	C-C----------------TGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAT---CTCA-------AA------CGACATA
dp4	T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA
droPer1	T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA
droWil1	T-T---------------CTCAG----------------A-------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAA--ACCAA-------AA------CGCAAAA
droVir3	G-ACAACATT---------------------------CGTGAGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTA-ACAAA------------------AATA
droMoj3	CGACAA--TTGCCCTGCGCTCAGCGTGCGGGACTCGCCGTGAGTGACGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAAT----------------------CCAACA
droGri2	G-T----------------GGTG----------------TGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCATTCA-------AATATA--ACCAGCA

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	4014.00	3087.00	830.00	25.00	72.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	3591.00	231.00	1037.00	26.00	2297.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	1841.00	287.00	1526.00	20.00	8.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	1560.00	1416.00	90.00	1.00	53.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	796.00	578.00	163.00	1.00	54.00
......................................................................GGTATCCACTGTAGGCCTATAT.....................................................................................	22	1	177.00	8.00	15.00	1.00	153.00
......................................................................GGTATCCACTGTAGGCCTATA......................................................................................	21	1	177.00	21.00	35.00	0.00	121.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	163.00	4.00	158.00	1.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	137.00	22.00	58.00	1.00	56.00
......................................................................GGTATCCACTGTAGGCCT.........................................................................................	18	1	131.00	0.00	120.00	1.00	10.00
....................................................................CTGGTATCCACTGTAGGCCT.........................................................................................	20	1	109.00	0.00	108.00	1.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	103.00	3.00	100.00	0.00	0.00
......................................................................GTTATCCACTGTAGGCCTATATG....................................................................................	23	1	77.00	0.00	14.00	0.00	63.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	73.00	62.00	5.00	0.00	6.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	68.00	45.00	21.00	2.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	65.00	65.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATGA...................................................................................	24	1	56.00	6.00	2.00	0.00	48.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	52.00	52.00	0.00	0.00	0.00
..........................................................................TCCACTGTAGGCCTATATG....................................................................................	19	1	50.00	0.00	48.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	50.00	10.00	31.00	2.00	7.00
........................................................................TATCCACTGTAGGCCTATATG....................................................................................	21	1	35.00	0.00	24.00	0.00	11.00
.......................................................................GTATCCACTGTAGGCCTATATG....................................................................................	22	1	32.00	0.00	14.00	0.00	18.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	29.00	1.00	22.00	0.00	6.00
...................................................................CCTGGTATCCACTGTAGGCCT.........................................................................................	21	1	26.00	0.00	23.00	0.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................	23	1	23.00	23.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................	22	1	22.00	22.00	0.00	0.00	0.00
......................................................................GCTATCCACTGTAGGCCTATATG....................................................................................	23	1	22.00	0.00	10.00	0.00	12.00
...........................................................................CCACTGTAGGCCTATATG....................................................................................	18	1	21.00	0.00	20.00	0.00	1.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	20.00	16.00	3.00	1.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	19.00	1.00	18.00	0.00	0.00
.....................................................................TTGTATCCACTGTAGGCCTATATG....................................................................................	24	1	18.00	0.00	12.00	0.00	6.00
.....................................................................TGTTATCCACTGTAGGCCTATATG....................................................................................	24	1	17.00	0.00	8.00	0.00	9.00
......................................................................GGTATCCACTGTAGGCCTAT.......................................................................................	20	1	17.00	4.00	8.00	0.00	5.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	16.00	15.00	1.00	0.00	0.00
......................................................................TGTATCCACTGTAGGCCTATATG....................................................................................	23	1	15.00	0.00	4.00	0.00	11.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	15.00	13.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAAG..................................................	23	1	15.00	15.00	0.00	0.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCC.....................................................	20	1	15.00	0.00	13.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	14.00	4.00	9.00	1.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATGT...................................................................................	24	1	14.00	1.00	4.00	0.00	9.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	13.00	13.00	0.00	0.00	0.00
.........................................................................................................TAAGCACGCGGTGAATGCCA....................................................	20	1	13.00	0.00	10.00	0.00	3.00
..................................................................TCCTGGTATCCACTGTAGGCCT.........................................................................................	22	1	13.00	0.00	5.00	0.00	8.00
....................................................................CTGGTATCCACTGTAGGCCC.........................................................................................	20	1	13.00	0.00	13.00	0.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	13.00	0.00	13.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................	22	1	13.00	13.00	0.00	0.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	12.00	1.00	9.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	12.00	12.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCCA...................................................	22	1	11.00	11.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	11.00	10.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	11.00	0.00	10.00	1.00	0.00
......................................................................GGTATCCACTGTAGGCCC.........................................................................................	18	1	11.00	0.00	11.00	0.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	11.00	1.00	10.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	10.00	10.00	0.00	0.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCC.....................................................	20	1	10.00	0.00	10.00	0.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	9.00	9.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................	23	1	9.00	8.00	1.00	0.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	9.00	6.00	3.00	0.00	0.00
....................................................................CTGGTATCCACTGTAGGCCTAT.......................................................................................	22	1	9.00	0.00	9.00	0.00	0.00
.......................................................................TTATCCACTGTAGGCCTATATG....................................................................................	22	1	8.00	0.00	4.00	0.00	4.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	7.00	7.00	0.00	0.00	0.00
......................................................................GGGATCCACTGTAGGCCTATATG....................................................................................	23	1	7.00	2.00	2.00	0.00	3.00
.....................................................................TCGTATCCACTGTAGGCCTATATG....................................................................................	24	1	7.00	0.00	1.00	0.00	6.00
...................................................................CCTGGTATCCACTGTAGGCCC.........................................................................................	21	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	7.00	7.00	0.00	0.00	0.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	7.00	7.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTATAC.....................................................................................	22	1	7.00	0.00	1.00	0.00	6.00
........................................................................................................TAAGCCACGCGGTGAATGCC.....................................................	20	1	7.00	1.00	6.00	0.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	6.00	6.00	0.00	0.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	6.00	6.00	0.00	0.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATA......................................................................................	22	1	6.00	3.00	1.00	0.00	2.00
......................................................................GGTATCCACTGTAGGCCTATATGG...................................................................................	24	1	6.00	0.00	0.00	0.00	6.00
......................................................................GGTATCCACTGTAGGCCTA........................................................................................	19	1	6.00	1.00	3.00	0.00	2.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	6.00	3.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	5.00	5.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATA....................................................................................	23	1	5.00	2.00	1.00	0.00	2.00
.........................................................................ATCCACTGTAGGCCTATATG....................................................................................	20	1	5.00	0.00	2.00	0.00	3.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	5.00	5.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	5.00	4.00	1.00	0.00	0.00
......................................................................GATATCCACTGTAGGCCTATATG....................................................................................	23	1	5.00	0.00	2.00	1.00	2.00
.........................................................................................................TAAGCACGCGGTGAATGCC.....................................................	19	1	5.00	0.00	5.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATGAA..................................................................................	25	1	5.00	1.00	0.00	0.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGCCAG...................................................	22	1	5.00	2.00	2.00	0.00	1.00
......................................................................AGTATCCACTGTAGGCCTATATG....................................................................................	23	1	5.00	1.00	2.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	5.00	2.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	5.00	2.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCAA...................................................	22	1	5.00	5.00	0.00	0.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATAT.....................................................................................	23	1	4.00	0.00	2.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	4.00	4.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCAA...................................................	22	1	4.00	4.00	0.00	0.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCAA...................................................	22	1	4.00	4.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTCTATG....................................................................................	23	1	4.00	3.00	0.00	0.00	1.00
........................................................................................................TAAGGCACGCGGGGAATGCCAAG..................................................	23	1	4.00	2.00	1.00	0.00	1.00
........................................................................................................TAAGGCACCCGGTGAATGCC.....................................................	20	1	4.00	0.00	4.00	0.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	4.00	0.00	4.00	0.00	0.00
......................................................................GGTGTCCACTGTAGGCCTATATG....................................................................................	23	1	4.00	1.00	0.00	0.00	3.00
......................................................................GGTATCCACTGTAGGCCG.........................................................................................	18	1	4.00	0.00	4.00	0.00	0.00
......................................................................CGTATCCACTGTAGGCCTATATG....................................................................................	23	1	4.00	0.00	1.00	0.00	3.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	4.00	4.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTACATG....................................................................................	23	1	4.00	1.00	1.00	0.00	2.00

droSec1

C-C----------------CAAG----------------TGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	98409.00	2162.00	27424.00	68823.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	44649.00	1282.00	1264.00	42103.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	19427.00	206.00	108.00	19113.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	11614.00	106.00	8959.00	2549.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	5153.00	122.00	2296.00	2735.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	988.00	19.00	9.00	960.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	454.00	6.00	237.00	211.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	448.00	3.00	399.00	46.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	372.00	2.00	3.00	367.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	295.00	6.00	33.00	256.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	287.00	13.00	42.00	232.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	244.00	2.00	164.00	78.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	244.00	6.00	37.00	201.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	242.00	2.00	213.00	27.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	229.00	7.00	71.00	151.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	223.00	6.00	53.00	164.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	212.00	1.00	10.00	201.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	208.00	4.00	133.00	71.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	195.00	5.00	5.00	185.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	191.00	4.00	3.00	184.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	180.00	3.00	29.00	148.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	157.00	2.00	40.00	115.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	153.00	1.00	21.00	131.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	150.00	2.00	41.00	107.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	148.00	3.00	49.00	96.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	147.00	3.00	33.00	111.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	145.00	4.00	46.00	95.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	133.00	1.00	40.00	92.00
........................................................................................................TAAGGTACGCGGTGAATGCCAA...................................................	22	1	132.00	0.00	127.00	5.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	132.00	1.00	48.00	83.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	131.00	3.00	37.00	91.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	128.00	1.00	41.00	86.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	127.00	15.00	55.00	57.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	123.00	0.00	19.00	104.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	117.00	0.00	47.00	70.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	116.00	16.00	4.00	96.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	116.00	0.00	7.00	109.00
........................................................................................................TAAGGCACGCGGTGAATGT......................................................	19	1	111.00	9.00	0.00	102.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	110.00	3.00	21.00	86.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	105.00	0.00	8.00	97.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	105.00	1.00	5.00	99.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	104.00	2.00	33.00	69.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	95.00	1.00	12.00	82.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	92.00	2.00	19.00	71.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	91.00	0.00	41.00	50.00
.........................................................................................................TAAGCACGCGGTGAATGCCA....................................................	20	1	90.00	3.00	5.00	82.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	88.00	4.00	28.00	56.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	88.00	8.00	3.00	77.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	87.00	0.00	35.00	52.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	83.00	0.00	24.00	59.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	77.00	2.00	25.00	50.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	76.00	1.00	33.00	42.00
........................................................................................................TAAGGCACACGGTGAATGCC.....................................................	20	1	76.00	0.00	1.00	75.00
........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................	21	1	76.00	2.00	7.00	67.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	74.00	1.00	25.00	48.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	73.00	0.00	39.00	34.00
........................................................................................................TAATGCACGCGGTGAATGCC.....................................................	20	1	72.00	2.00	1.00	69.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	70.00	2.00	31.00	37.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	70.00	1.00	14.00	55.00
.........................................................................................................TATGCACGCGGTGAATGCCA....................................................	20	1	69.00	0.00	8.00	61.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	68.00	13.00	0.00	55.00
.........................................................................................................AAGGCACGCGGTGAATGCC.....................................................	19	1	68.00	0.00	0.00	68.00
........................................................................................................TAAGGCACGCGGTGAATCCA.....................................................	20	1	66.00	0.00	14.00	52.00
.......................................................................................................CTAAGGCACGCGGTGAATGCC.....................................................	21	1	66.00	0.00	1.00	65.00
........................................................................................................TAAGGCAAGCGGTGAATGCC.....................................................	20	1	66.00	0.00	0.00	66.00
........................................................................................................TAAGGCACTCGGTGAATGCC.....................................................	20	1	65.00	0.00	1.00	64.00
........................................................................................................TAAGGCACGCGGTGAATGA......................................................	19	1	64.00	6.00	0.00	58.00
........................................................................................................TAAGTCACGCGGTGAATGCC.....................................................	20	1	64.00	3.00	0.00	61.00
........................................................................................................TAAGGCACGAGGTGAATGCC.....................................................	20	1	61.00	0.00	2.00	59.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	60.00	2.00	9.00	49.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	60.00	0.00	5.00	55.00
........................................................................................................TAAGGAACGCGGTGAATGCC.....................................................	20	1	60.00	1.00	1.00	58.00
........................................................................................................TAAGGCACGCGGTGxATGCCA....................................................	20	1	59.00	2.00	38.00	19.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	58.00	1.00	22.00	35.00
......................................................................GGTATCCACTGTAGGCCTATA......................................................................................	21	1	55.00	0.00	31.00	24.00
........................................................................................................TAAGGCACGTGGTGAATGCC.....................................................	20	1	55.00	0.00	13.00	42.00
........................................................................................................TAAGGCACCCGGTGAATGCCA....................................................	21	1	55.00	0.00	18.00	37.00
........................................................................................................TAAGGCACGCGGTGAATCCC.....................................................	20	1	55.00	4.00	2.00	49.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	55.00	2.00	17.00	36.00
........................................................................................................TAAGGCACGCGGTGAATGCT.....................................................	20	1	53.00	2.00	0.00	51.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	52.00	2.00	0.00	50.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	51.00	1.00	16.00	34.00
........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................	21	1	49.00	0.00	21.00	28.00
........................................................................................................TAGGGCACGCGGTGAATGC......................................................	19	1	48.00	2.00	0.00	46.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	47.00	0.00	7.00	40.00
........................................................................................................TAAGGCACGCTGTGAATGCC.....................................................	20	1	46.00	2.00	0.00	44.00
........................................................................................................TAAGGCACGCGGCGAATGC......................................................	19	1	45.00	1.00	2.00	42.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	45.00	1.00	16.00	28.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	45.00	0.00	4.00	41.00
........................................................................................................TAAGGCACGCCGTGAATGCCA....................................................	21	1	44.00	1.00	13.00	30.00
........................................................................................................TAAGGCACGCGGTAAATGCC.....................................................	20	1	44.00	2.00	2.00	40.00
........................................................................................................TAAAGCACGCGGTGAATGCC.....................................................	20	1	43.00	0.00	1.00	42.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	43.00	0.00	17.00	26.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	42.00	1.00	2.00	39.00
........................................................................................................TAAGGCACGCGGTGAATACC.....................................................	20	1	42.00	0.00	0.00	42.00
........................................................................................................TAAGGCACGCGGTGAATGTC.....................................................	20	1	42.00	7.00	4.00	31.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	41.00	0.00	2.00	39.00
........................................................................................................TAAGGCACGCxGTGAATGCCA....................................................	20	1	40.00	0.00	27.00	13.00
........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................	21	1	38.00	0.00	10.00	28.00
........................................................................................................CAAGGCACGCGGTGAATGCC.....................................................	20	1	38.00	2.00	3.00	33.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	36.00	3.00	2.00	31.00

droYak2

C-C----------------CAAG----------------TGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-TCTCA-------TA------CCCAATG	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	129022.00	3926.00	40696.00	690.00	83551.00	159.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	34870.00	318.00	11212.00	295.00	22787.00	258.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	7993.00	3893.00	1249.00	30.00	2807.00	14.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	3778.00	2.00	1266.00	34.00	2463.00	13.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	2733.00	33.00	416.00	0.00	2282.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	2614.00	599.00	623.00	18.00	1365.00	9.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	2119.00	44.00	556.00	1.00	1518.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	1865.00	6.00	433.00	2.00	1407.00	17.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	1162.00	2.00	82.00	0.00	1078.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	969.00	245.00	15.00	0.00	16.00	693.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	806.00	15.00	153.00	4.00	634.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	614.00	7.00	147.00	2.00	458.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	611.00	8.00	73.00	0.00	530.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	553.00	11.00	104.00	0.00	431.00	7.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	473.00	13.00	81.00	1.00	378.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	376.00	106.00	83.00	1.00	184.00	2.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	325.00	1.00	156.00	0.00	168.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	310.00	6.00	79.00	1.00	224.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	306.00	1.00	25.00	0.00	280.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	278.00	9.00	80.00	0.00	189.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	265.00	5.00	45.00	0.00	215.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	265.00	7.00	77.00	3.00	178.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	264.00	138.00	58.00	0.00	68.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................	21	1	263.00	4.00	27.00	0.00	232.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	250.00	14.00	86.00	0.00	150.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	236.00	1.00	62.00	1.00	171.00	1.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	221.00	10.00	38.00	0.00	173.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	215.00	3.00	38.00	0.00	174.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	210.00	1.00	38.00	1.00	170.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	202.00	6.00	43.00	1.00	151.00	1.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	196.00	1.00	23.00	0.00	172.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	190.00	3.00	33.00	0.00	154.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	175.00	5.00	108.00	0.00	62.00	0.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	169.00	3.00	47.00	0.00	119.00	0.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	169.00	3.00	49.00	0.00	117.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	165.00	3.00	38.00	2.00	122.00	0.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	161.00	2.00	50.00	2.00	107.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	160.00	3.00	32.00	1.00	124.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	155.00	1.00	27.00	0.00	127.00	0.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	154.00	3.00	46.00	2.00	101.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	148.00	20.00	23.00	0.00	105.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	146.00	3.00	58.00	0.00	85.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCC.....................................................	20	1	141.00	2.00	24.00	0.00	114.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	141.00	11.00	54.00	1.00	75.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	140.00	5.00	47.00	0.00	88.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	137.00	1.00	14.00	2.00	119.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	131.00	2.00	32.00	0.00	96.00	1.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	129.00	5.00	38.00	0.00	86.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	125.00	4.00	32.00	4.00	84.00	1.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	124.00	3.00	21.00	0.00	100.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCT....................................................	21	1	123.00	0.00	29.00	0.00	94.00	0.00
........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................	21	1	123.00	4.00	25.00	0.00	94.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	120.00	1.00	25.00	0.00	94.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................	23	1	119.00	5.00	12.00	0.00	102.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	117.00	4.00	39.00	1.00	73.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	116.00	8.00	38.00	1.00	69.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................	22	1	116.00	46.00	17.00	0.00	53.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	113.00	4.00	19.00	2.00	88.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCT....................................................	21	1	110.00	1.00	8.00	0.00	101.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCC.....................................................	20	1	108.00	0.00	18.00	0.00	90.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCG....................................................	21	1	107.00	0.00	2.00	0.00	105.00	0.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	105.00	0.00	29.00	0.00	76.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCC....................................................	21	1	105.00	0.00	8.00	0.00	97.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	103.00	1.00	26.00	1.00	75.00	0.00
........................................................................................................TAAGGCACGCGGTGATTGCCA....................................................	21	1	103.00	1.00	4.00	0.00	98.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	103.00	3.00	23.00	0.00	77.00	0.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	103.00	2.00	34.00	1.00	66.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	102.00	7.00	38.00	1.00	56.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	101.00	0.00	27.00	0.00	74.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................	21	1	96.00	6.00	23.00	1.00	66.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCT....................................................	21	1	93.00	0.00	5.00	0.00	88.00	0.00
........................................................................................................TAAGGCACGCGGTGCCTGCCA....................................................	21	1	91.00	2.00	7.00	0.00	82.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	90.00	1.00	14.00	0.00	74.00	1.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	90.00	2.00	13.00	0.00	75.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	89.00	7.00	25.00	1.00	55.00	1.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	89.00	1.00	48.00	1.00	39.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	89.00	0.00	21.00	0.00	67.00	1.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	88.00	3.00	42.00	0.00	43.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCT.....................................................	20	1	88.00	1.00	22.00	1.00	64.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	86.00	3.00	23.00	0.00	60.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	81.00	3.00	20.00	0.00	55.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................	23	1	77.00	10.00	22.00	0.00	45.00	0.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	75.00	1.00	21.00	0.00	53.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	74.00	0.00	11.00	1.00	62.00	0.00
........................................................................................................TAAGGCCCGCGGTGAATGCCA....................................................	21	1	74.00	2.00	9.00	0.00	63.00	0.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	71.00	1.00	17.00	0.00	50.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	71.00	0.00	24.00	0.00	47.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	70.00	1.00	14.00	0.00	55.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGC......................................................	19	1	70.00	1.00	12.00	0.00	57.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	70.00	0.00	15.00	0.00	53.00	2.00
........................................................................................................TAAGGCACGCGGTGTATGCC.....................................................	20	1	70.00	0.00	8.00	0.00	62.00	0.00
........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................	21	1	67.00	0.00	15.00	1.00	50.00	1.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	66.00	31.00	8.00	1.00	9.00	17.00
........................................................................................................TAACACACGCGGTGAATGCCA....................................................	21	1	66.00	0.00	8.00	0.00	58.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	65.00	0.00	20.00	0.00	45.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTC.....................................................	20	1	63.00	0.00	18.00	0.00	44.00	1.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	62.00	2.00	11.00	0.00	46.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGGCT....................................................	21	1	60.00	0.00	30.00	0.00	30.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCC.....................................................	20	1	60.00	0.00	17.00	0.00	43.00	0.00
........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................	21	1	60.00	1.00	12.00	0.00	47.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	58.00	2.00	13.00	0.00	43.00	0.00

droEre2

C-C----------------CAAG----------------TGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAATG	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	292160.00	2430.00	83393.00	0.00	206337.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	71848.00	214.00	10735.00	0.00	60899.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	12415.00	1.00	266.00	0.00	12148.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	10959.00	1250.00	3124.00	0.00	6585.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	4239.00	219.00	805.00	0.00	3215.00
........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................	21	1	2251.00	1.00	35.00	0.00	2215.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	1967.00	8.00	20.00	0.00	1939.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	1838.00	46.00	1560.00	0.00	232.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	1630.00	4.00	528.00	0.00	1098.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	1522.00	1.00	142.00	0.00	1379.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	1521.00	34.00	162.00	0.00	1325.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	1431.00	14.00	46.00	0.00	1371.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	1333.00	7.00	40.00	0.00	1286.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	1195.00	16.00	333.00	0.00	846.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	1071.00	4.00	230.00	0.00	837.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	1067.00	5.00	35.00	0.00	1027.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	1052.00	18.00	769.00	0.00	265.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	963.00	3.00	56.00	0.00	904.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	950.00	1.00	31.00	0.00	918.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	712.00	38.00	123.00	0.00	551.00
........................................................................................................TAAGGCACGCTGTGAATGCC.....................................................	20	1	699.00	2.00	5.00	0.00	692.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	671.00	4.00	422.00	0.00	245.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	637.00	1.00	125.00	0.00	511.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	590.00	3.00	241.00	0.00	346.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	564.00	1.00	44.00	0.00	519.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	546.00	0.00	41.00	0.00	505.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	533.00	122.00	53.00	0.00	358.00
........................................................................................................TAATGCACGCGGTGAATGCC.....................................................	20	1	523.00	1.00	1.00	0.00	521.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	506.00	3.00	133.00	0.00	370.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	469.00	7.00	220.00	0.00	242.00
........................................................................................................TAAGGCACGCGGTTAATGCC.....................................................	20	1	460.00	0.00	12.00	0.00	448.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	459.00	14.00	151.00	0.00	294.00
........................................................................................................TAAGGCACTCGGTGAATGCC.....................................................	20	1	457.00	2.00	6.00	0.00	449.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	453.00	3.00	81.00	0.00	369.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	402.00	1.00	28.00	0.00	373.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	390.00	3.00	129.00	0.00	258.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	380.00	3.00	54.00	0.00	323.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	359.00	5.00	60.00	0.00	294.00
........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................	21	1	357.00	3.00	43.00	0.00	311.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	346.00	7.00	115.00	0.00	224.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	345.00	5.00	125.00	0.00	215.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	340.00	6.00	101.00	0.00	233.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	340.00	8.00	85.00	0.00	247.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	316.00	1.00	68.00	0.00	247.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	309.00	2.00	35.00	0.00	272.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	304.00	3.00	100.00	0.00	201.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	303.00	6.00	171.00	0.00	126.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	286.00	3.00	105.00	0.00	178.00
........................................................................................................TAAGGAACGCGGTGAATGCC.....................................................	20	1	285.00	0.00	2.00	0.00	283.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	280.00	3.00	52.00	0.00	225.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	278.00	1.00	38.00	0.00	239.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	275.00	2.00	109.00	0.00	164.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	273.00	4.00	72.00	0.00	197.00
........................................................................................................TAAGTCACGCGGTGAATGCC.....................................................	20	1	267.00	0.00	3.00	0.00	264.00
........................................................................................................TAAGGCACGAGGTGAATGCC.....................................................	20	1	264.00	0.00	7.00	0.00	257.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	256.00	6.00	95.00	0.00	155.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	245.00	3.00	77.00	0.00	165.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	240.00	0.00	36.00	0.00	204.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	234.00	1.00	61.00	0.00	172.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	231.00	2.00	26.00	0.00	203.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	215.00	3.00	68.00	0.00	144.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	211.00	1.00	52.00	0.00	158.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	210.00	5.00	68.00	0.00	137.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	193.00	1.00	59.00	0.00	133.00
........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................	21	1	190.00	1.00	27.00	0.00	162.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	189.00	3.00	17.00	0.00	169.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	187.00	3.00	119.00	0.00	65.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	185.00	7.00	54.00	0.00	124.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	184.00	2.00	31.00	0.00	151.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	180.00	1.00	34.00	0.00	145.00
........................................................................................................TAAGGCACGCGGTGAATCCC.....................................................	20	1	176.00	1.00	15.00	0.00	160.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	174.00	6.00	27.00	0.00	141.00
........................................................................................................TAAGGCAAGCGGTGAATGCC.....................................................	20	1	171.00	0.00	4.00	0.00	167.00
........................................................................................................TAAGGCACGCCGTGAATGCCA....................................................	21	1	164.00	4.00	25.00	0.00	135.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	163.00	1.00	5.00	0.00	157.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	160.00	5.00	18.00	0.00	137.00
........................................................................................................TAAGGCACGCTGTGAATGC......................................................	19	1	151.00	0.00	0.00	0.00	151.00
........................................................................................................TAAGGCACCCGGTGAATGCCA....................................................	21	1	149.00	3.00	20.00	0.00	126.00
.........................................................................................................TAAGCACGCGGTGAATGCCA....................................................	20	1	144.00	0.00	3.00	0.00	141.00
........................................................................................................TAAGGCACGCAGTGAATGCC.....................................................	20	1	140.00	0.00	43.00	0.00	97.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	136.00	0.00	69.00	0.00	67.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	133.00	4.00	34.00	0.00	95.00
.........................................................................................................AAGGCACGCGGTGAATGCC.....................................................	19	1	132.00	1.00	14.00	0.00	117.00
........................................................................................................TAAGGCACGCGGTAAATGCC.....................................................	20	1	127.00	0.00	15.00	0.00	112.00
........................................................................................................TATGGCACGCGGTGAATGCCA....................................................	21	1	125.00	2.00	11.00	0.00	112.00
........................................................................................................TAATGCACGCGGTGAATGC......................................................	19	1	124.00	1.00	0.00	0.00	123.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	116.00	7.00	26.00	0.00	83.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	115.00	2.00	39.00	0.00	74.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	115.00	47.00	59.00	0.00	9.00
........................................................................................................TAAGGCACGCGGTGAATCCA.....................................................	20	1	114.00	0.00	2.00	0.00	112.00
........................................................................................................TAAGGCACACGGTGAATGCC.....................................................	20	1	114.00	0.00	12.00	0.00	102.00
........................................................................................................TAAGGCACGTGGTGAATGCC.....................................................	20	1	114.00	0.00	6.00	0.00	108.00
..........................................................................................................AGGCACGCGGTGAATGCCA....................................................	19	1	112.00	0.00	24.00	0.00	88.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	112.00	8.00	72.00	0.00	32.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	109.00	2.00	28.00	0.00	79.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	107.00	13.00	7.00	0.00	87.00
........................................................................................................TAAGGCCCGCGGTGAATGCCA....................................................	21	1	105.00	3.00	25.00	0.00	77.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	102.00	8.00	69.00	0.00	25.00
........................................................................................................TAAGGCACGCGGTTAATGC......................................................	19	1	101.00	0.00	0.00	0.00	101.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	100.00	0.00	23.00	0.00	77.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	100.00	2.00	58.00	0.00	40.00

droEug1

C-C----------------CAAG----------------TGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------GAT-----CTCAACT

Size

Hit Count

Total Norm

droBia1

T-C----------------CAAG----------------TGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------CCCAGGA

Size

Hit Count

Total Norm

droTak1

C-C----------------CAAG----------------TGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------TA------ATTATAA

Size

Hit Count

Total Norm

droEle1

C-C----------------CAAG----------------TGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTT-ACTCAAACAAAAAA------CAAAGCG

Size

Hit Count

Total Norm

droRho1

C-C----------------CAAG----------------TGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AA------GCAAAT-

Size

Hit Count

Total Norm

droFic1

C-C----------------CAAG----------------TGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATT-ACTCA-------AATCCAAGGAAGATA

Size

Hit Count

Total Norm

droKik1

C-T----------------GAAG----------------TGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTT-ACTCAAAAATT-TA------ACTAAAA

Size

Hit Count

Total Norm

droAna3

C-C----------------AGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACT-ACAAA-------TG------ACATATT	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	82550.00	1283.00	46897.00	34073.00	297.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	48556.00	883.00	33415.00	14211.00	47.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	37238.00	250.00	33747.00	3239.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	4102.00	135.00	1650.00	2224.00	93.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	3223.00	66.00	1972.00	1151.00	34.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	2130.00	37.00	1131.00	961.00	1.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	675.00	6.00	637.00	32.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	604.00	4.00	169.00	430.00	1.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	536.00	2.00	468.00	64.00	2.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	502.00	5.00	324.00	172.00	1.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	447.00	4.00	339.00	104.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	441.00	4.00	90.00	343.00	4.00
........................................................................................................TAAGGCACTCGGTGAATGC......................................................	19	1	439.00	0.00	435.00	4.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	437.00	11.00	218.00	207.00	1.00
........................................................................................................TAAGGCACTCGGTGAATGCC.....................................................	20	1	434.00	3.00	418.00	12.00	1.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	418.00	4.00	352.00	62.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	407.00	3.00	57.00	345.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	395.00	5.00	292.00	97.00	1.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	391.00	5.00	354.00	31.00	1.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	326.00	4.00	241.00	81.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	322.00	6.00	252.00	64.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	301.00	3.00	98.00	200.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCC.....................................................	20	1	299.00	0.00	275.00	24.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTC......................................................	19	1	296.00	1.00	289.00	6.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	270.00	10.00	233.00	26.00	1.00
........................................................................................................TAAGGCACGAGGTGAATGCC.....................................................	20	1	264.00	4.00	227.00	33.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	257.00	6.00	226.00	23.00	2.00
........................................................................................................TAAGGAACGCGGTGAATGC......................................................	19	1	255.00	0.00	250.00	5.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	247.00	4.00	202.00	41.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	241.00	1.00	218.00	21.00	1.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	240.00	2.00	216.00	5.00	17.00
........................................................................................................TAAGGCACGAGGTGAATGC......................................................	19	1	233.00	1.00	221.00	11.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	231.00	1.00	14.00	209.00	7.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	219.00	4.00	49.00	166.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	202.00	0.00	53.00	148.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGA......................................................	19	1	192.00	0.00	174.00	18.00	0.00
........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................	21	1	188.00	2.00	156.00	28.00	2.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	185.00	1.00	28.00	156.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	181.00	4.00	123.00	51.00	3.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	173.00	0.00	41.00	130.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	172.00	3.00	116.00	53.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGC......................................................	19	1	172.00	0.00	162.00	10.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	169.00	2.00	103.00	62.00	2.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	168.00	3.00	110.00	51.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGCT.....................................................	20	1	161.00	9.00	75.00	77.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGT......................................................	19	1	153.00	10.00	120.00	23.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCC.....................................................	20	1	151.00	0.00	140.00	11.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGC......................................................	19	1	151.00	1.00	146.00	4.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	150.00	2.00	68.00	79.00	1.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	150.00	1.00	76.00	72.00	1.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	150.00	0.00	61.00	88.00	1.00
........................................................................................................TAAGGCACGCTGTGAATGC......................................................	19	1	149.00	0.00	146.00	3.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	148.00	2.00	34.00	111.00	1.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	148.00	1.00	80.00	67.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	145.00	3.00	86.00	56.00	0.00
........................................................................................................TAAGGCACGCTGTGAATGCC.....................................................	20	1	141.00	2.00	130.00	9.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	139.00	1.00	82.00	56.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	137.00	0.00	93.00	44.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	137.00	11.00	17.00	109.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	136.00	3.00	89.00	44.00	0.00
........................................................................................................TAATGCACGCGGTGAATGC......................................................	19	1	136.00	2.00	132.00	2.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCC.....................................................	20	1	136.00	3.00	120.00	13.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	135.00	0.00	11.00	124.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	134.00	0.00	4.00	128.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	128.00	0.00	61.00	66.00	1.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	126.00	2.00	20.00	104.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGC......................................................	19	1	124.00	1.00	86.00	37.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCC.....................................................	20	1	121.00	6.00	82.00	33.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	118.00	0.00	34.00	84.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	115.00	2.00	23.00	87.00	3.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	111.00	0.00	8.00	102.00	1.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	107.00	1.00	71.00	34.00	1.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	107.00	4.00	32.00	71.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	104.00	4.00	59.00	41.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGC......................................................	19	1	104.00	3.00	92.00	9.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	101.00	0.00	9.00	91.00	1.00
........................................................................................................TAAGGCACGCGGTTAATGC......................................................	19	1	101.00	0.00	98.00	3.00	0.00
........................................................................................................TAAGGCACGCGGTTAATGCC.....................................................	20	1	101.00	2.00	81.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCC.....................................................	20	1	98.00	3.00	52.00	43.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	98.00	1.00	38.00	59.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	95.00	1.00	32.00	61.00	1.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	94.00	3.00	45.00	46.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	92.00	0.00	39.00	53.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	89.00	4.00	55.00	26.00	4.00
........................................................................................................TAAGGCACACGGTGAATGCC.....................................................	20	1	87.00	1.00	69.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	86.00	3.00	41.00	41.00	1.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	86.00	3.00	14.00	69.00	0.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	85.00	0.00	46.00	39.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCC.....................................................	20	1	84.00	0.00	1.00	83.00	0.00
.........................................................................................................TAAGCACGCGGTGAATGCCA....................................................	20	1	84.00	0.00	84.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	83.00	0.00	6.00	76.00	1.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	80.00	3.00	54.00	23.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCC.....................................................	20	1	78.00	0.00	22.00	56.00	0.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	77.00	6.00	44.00	25.00	2.00
........................................................................................................TAAGGCACGTGGTGAATGCC.....................................................	20	1	77.00	2.00	54.00	20.00	1.00
........................................................................................................TAAGGCATGCGGTGAATGCC.....................................................	20	1	76.00	0.00	44.00	32.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCC.....................................................	20	1	75.00	0.00	30.00	45.00	0.00
........................................................................................................TAAGGCACACGGTGAATGC......................................................	19	1	72.00	0.00	68.00	4.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGC......................................................	19	1	71.00	0.00	39.00	32.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCC.....................................................	20	1	70.00	4.00	12.00	54.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCC.....................................................	19	1	69.00	2.00	46.00	21.00	0.00

droBip1

C-C----------------TGAG----------------GCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAT---CTCA-------AA------CGACATA

Size

Hit Count

Total Norm

dp4

T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	37931.00	458.00	3038.00	34432.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	10201.00	126.00	4518.00	5557.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	5893.00	215.00	207.00	5470.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	5888.00	19.00	2270.00	3599.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	533.00	21.00	72.00	440.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	487.00	20.00	346.00	120.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	373.00	5.00	12.00	354.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	290.00	34.00	4.00	252.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	247.00	0.00	23.00	224.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	218.00	1.00	44.00	173.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	209.00	0.00	194.00	14.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	199.00	4.00	24.00	171.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	192.00	0.00	15.00	177.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................	23	1	160.00	0.00	64.00	96.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................	23	1	152.00	0.00	112.00	40.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	119.00	1.00	5.00	113.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	105.00	1.00	6.00	98.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCAAG..................................................	22	1	98.00	2.00	45.00	51.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	97.00	0.00	7.00	90.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	96.00	0.00	68.00	28.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	94.00	0.00	15.00	79.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	82.00	0.00	5.00	77.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	78.00	0.00	7.00	71.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	76.00	0.00	3.00	73.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	76.00	0.00	9.00	67.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	75.00	2.00	30.00	43.00	0.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	74.00	1.00	2.00	71.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	72.00	0.00	15.00	57.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	67.00	0.00	6.00	61.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAAG..................................................	23	1	65.00	1.00	24.00	40.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAAG..................................................	23	1	64.00	0.00	40.00	24.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	53.00	1.00	1.00	51.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	52.00	0.00	2.00	50.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	51.00	1.00	11.00	39.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	51.00	1.00	1.00	49.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	51.00	0.00	11.00	40.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	50.00	0.00	5.00	45.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	49.00	0.00	2.00	47.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	48.00	0.00	6.00	42.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	46.00	0.00	4.00	42.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	45.00	0.00	2.00	43.00	0.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	45.00	0.00	3.00	42.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................	22	1	44.00	0.00	13.00	31.00	0.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	43.00	2.00	3.00	38.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	42.00	0.00	5.00	37.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCAAG..................................................	23	1	42.00	0.00	20.00	22.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	42.00	0.00	3.00	39.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	42.00	0.00	7.00	35.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................	22	1	40.00	0.00	24.00	16.00	0.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	38.00	0.00	6.00	32.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	38.00	0.00	2.00	36.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................	21	1	36.00	0.00	1.00	35.00	0.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	36.00	0.00	3.00	33.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACAAG..................................................	23	1	35.00	0.00	24.00	11.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	34.00	0.00	2.00	32.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	34.00	0.00	6.00	28.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCGAG..................................................	23	1	33.00	0.00	18.00	15.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	33.00	0.00	1.00	32.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	33.00	0.00	2.00	31.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	31.00	0.00	3.00	28.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCAAG..................................................	23	1	31.00	0.00	24.00	7.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	30.00	0.00	10.00	20.00	0.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	30.00	1.00	0.00	29.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCGA...................................................	22	1	29.00	0.00	19.00	10.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	28.00	1.00	1.00	26.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCT....................................................	21	1	28.00	0.00	0.00	28.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	27.00	0.00	5.00	22.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATA......................................................................................	22	1	27.00	0.00	26.00	1.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	27.00	0.00	7.00	20.00	0.00
........................................................................................................TATGGCACGCGGTGAATGCCA....................................................	21	1	27.00	0.00	0.00	27.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATAT.....................................................................................	23	1	26.00	1.00	18.00	7.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	26.00	0.00	8.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	25.00	0.00	3.00	22.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCATG..................................................	23	1	25.00	0.00	17.00	8.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTA........................................................................................	20	1	25.00	0.00	1.00	24.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGC.................................................	24	1	25.00	0.00	12.00	13.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAGG..................................................	23	1	25.00	0.00	10.00	15.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	24.00	1.00	3.00	20.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCCAAG..................................................	23	1	21.00	0.00	16.00	5.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCAA...................................................	22	1	21.00	0.00	7.00	14.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTAAG..................................................	23	1	21.00	0.00	9.00	12.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGCAAG..................................................	23	1	20.00	0.00	17.00	3.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	20.00	0.00	2.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCTAG..................................................	23	1	20.00	0.00	8.00	12.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................	23	1	20.00	0.00	6.00	14.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	20.00	0.00	0.00	20.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	20.00	0.00	0.00	20.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	19.00	0.00	0.00	19.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCAA...................................................	21	1	19.00	1.00	5.00	13.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCAAG..................................................	23	1	19.00	0.00	5.00	14.00	0.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	19.00	0.00	2.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCAAG..................................................	23	1	19.00	0.00	9.00	10.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCAAG..................................................	23	1	19.00	0.00	11.00	8.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	19.00	1.00	3.00	15.00	0.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCAAG..................................................	24	1	18.00	0.00	10.00	8.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................	21	1	18.00	0.00	3.00	15.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCAAG..................................................	23	1	18.00	0.00	8.00	10.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	18.00	1.00	0.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCATT..................................................	23	1	17.00	0.00	0.00	17.00	0.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	17.00	0.00	1.00	16.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	17.00	0.00	0.00	17.00	0.00

droPer1

T-C----------------TCAG----------------TGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA------TCA-------AA------AACAGCA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	62355.00	458.00	499.00	29718.00	31672.00	8.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	14556.00	220.00	58.00	5244.00	9033.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	10647.00	181.00	509.00	4567.00	5365.00	25.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	4448.00	38.00	259.00	2796.00	1340.00	15.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	938.00	21.00	12.00	330.00	575.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	867.00	55.00	1.00	212.00	599.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	676.00	5.00	0.00	160.00	511.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	485.00	0.00	0.00	158.00	327.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	473.00	0.00	2.00	193.00	278.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................	24	1	468.00	2.00	62.00	152.00	227.00	25.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	378.00	12.00	4.00	139.00	223.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	370.00	1.00	2.00	48.00	319.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	316.00	0.00	7.00	143.00	166.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	250.00	0.00	1.00	61.00	188.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................	23	1	235.00	0.00	5.00	76.00	154.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	220.00	0.00	4.00	73.00	143.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	206.00	0.00	2.00	83.00	121.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	203.00	0.00	0.00	53.00	150.00	0.00
......................................................................GGTATCCACTGTAGGCCTATATG....................................................................................	23	1	189.00	1.00	33.00	11.00	9.00	135.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	171.00	0.00	3.00	97.00	71.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	153.00	1.00	0.00	29.00	123.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	152.00	0.00	4.00	37.00	111.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	146.00	0.00	0.00	105.00	41.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	130.00	0.00	1.00	55.00	74.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	127.00	0.00	1.00	16.00	110.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	123.00	0.00	0.00	24.00	99.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	119.00	1.00	0.00	23.00	95.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	116.00	0.00	1.00	30.00	85.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	113.00	2.00	3.00	55.00	53.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	110.00	0.00	0.00	32.00	78.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	108.00	0.00	0.00	25.00	83.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	108.00	0.00	0.00	12.00	96.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	101.00	0.00	0.00	36.00	65.00	0.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	100.00	0.00	2.00	19.00	79.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	97.00	0.00	0.00	31.00	66.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAAG..................................................	23	1	96.00	0.00	1.00	29.00	66.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	95.00	0.00	1.00	41.00	53.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	94.00	0.00	0.00	39.00	55.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	92.00	0.00	0.00	34.00	58.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	89.00	2.00	1.00	28.00	58.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	86.00	0.00	1.00	20.00	65.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	85.00	0.00	1.00	43.00	41.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	83.00	0.00	0.00	20.00	63.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	82.00	0.00	0.00	38.00	44.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	81.00	0.00	0.00	23.00	58.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCAAG..................................................	22	1	81.00	0.00	2.00	33.00	46.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	79.00	0.00	0.00	38.00	41.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	78.00	0.00	0.00	49.00	29.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................	21	1	78.00	0.00	0.00	25.00	53.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	78.00	0.00	1.00	50.00	27.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	77.00	0.00	0.00	19.00	58.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	75.00	0.00	0.00	26.00	49.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	71.00	0.00	0.00	49.00	22.00	0.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	68.00	1.00	0.00	50.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	68.00	0.00	0.00	26.00	42.00	0.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	68.00	0.00	0.00	29.00	39.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	67.00	1.00	0.00	12.00	54.00	0.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	67.00	0.00	0.00	31.00	36.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	67.00	1.00	2.00	23.00	41.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	66.00	1.00	0.00	28.00	37.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	66.00	0.00	0.00	23.00	43.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................	23	1	66.00	0.00	15.00	16.00	35.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	63.00	0.00	0.00	10.00	53.00	0.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	62.00	1.00	0.00	23.00	38.00	0.00
........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................	21	1	57.00	0.00	0.00	15.00	42.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	57.00	0.00	2.00	14.00	41.00	0.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	55.00	0.00	0.00	23.00	32.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCAAG..................................................	23	1	54.00	0.00	0.00	7.00	46.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCATG..................................................	23	1	54.00	0.00	0.00	3.00	51.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCC.....................................................	20	1	52.00	0.00	0.00	7.00	45.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTA........................................................................................	20	1	51.00	0.00	0.00	21.00	30.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	51.00	1.00	0.00	17.00	33.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCC.....................................................	20	1	48.00	0.00	0.00	6.00	42.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCT....................................................	21	1	48.00	0.00	0.00	10.00	38.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................	23	1	46.00	0.00	1.00	16.00	29.00	0.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	45.00	0.00	1.00	23.00	21.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAGG..................................................	23	1	45.00	0.00	0.00	7.00	38.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	44.00	0.00	0.00	2.00	42.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	44.00	0.00	0.00	22.00	22.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCC.....................................................	20	1	43.00	0.00	0.00	4.00	39.00	0.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	42.00	0.00	1.00	13.00	28.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	42.00	0.00	0.00	22.00	20.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCAAG..................................................	23	1	41.00	1.00	0.00	10.00	30.00	0.00
........................................................................................................TAAGGGACGCGGTGAATGCCA....................................................	21	1	41.00	0.00	0.00	25.00	16.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAAG..................................................	23	1	40.00	0.00	6.00	14.00	20.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCTAG..................................................	23	1	39.00	0.00	1.00	4.00	34.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................	21	1	39.00	0.00	1.00	20.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCC.....................................................	20	1	37.00	0.00	0.00	9.00	28.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCGAG..................................................	23	1	37.00	0.00	1.00	11.00	25.00	0.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	36.00	0.00	0.00	9.00	27.00	0.00
........................................................................................................TAAGGCAGGCGGTGAATGCCA....................................................	21	1	36.00	0.00	0.00	3.00	33.00	0.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	36.00	0.00	0.00	10.00	26.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCG....................................................	21	1	36.00	0.00	0.00	5.00	31.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	34.00	0.00	0.00	12.00	22.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCC.....................................................	19	1	34.00	0.00	0.00	11.00	23.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCC.....................................................	20	1	33.00	0.00	1.00	9.00	23.00	0.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	33.00	1.00	0.00	11.00	21.00	0.00
........................................................................................................TAAGGCACGCGGTGATTGCCA....................................................	21	1	33.00	0.00	0.00	12.00	21.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	32.00	0.00	0.00	10.00	22.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCC.....................................................	20	1	32.00	0.00	0.00	3.00	29.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	31.00	0.00	0.00	10.00	21.00	0.00

droWil1

T-T---------------CTCAG----------------A-------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAA--ACCAA-------AA------CGCAAAA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	75053.00	729.00	34386.00	39439.00	499.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	23812.00	63.00	21878.00	1784.00	87.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	23196.00	85.00	347.00	22735.00	29.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	20385.00	360.00	2217.00	17259.00	549.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	5094.00	33.00	3471.00	1525.00	65.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	487.00	1.00	377.00	106.00	3.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	306.00	5.00	150.00	151.00	0.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	285.00	4.00	13.00	264.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	263.00	1.00	6.00	256.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	243.00	1.00	104.00	138.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	240.00	7.00	12.00	196.00	25.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	234.00	0.00	41.00	193.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	234.00	0.00	66.00	168.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	211.00	0.00	38.00	173.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	206.00	0.00	26.00	180.00	0.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	194.00	1.00	61.00	130.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	191.00	1.00	139.00	50.00	1.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	190.00	0.00	21.00	169.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	186.00	0.00	36.00	149.00	1.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	181.00	0.00	56.00	125.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	181.00	1.00	48.00	116.00	16.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	170.00	2.00	76.00	85.00	7.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	156.00	1.00	26.00	116.00	13.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	145.00	0.00	93.00	52.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	138.00	1.00	43.00	92.00	2.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	135.00	1.00	47.00	86.00	1.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	133.00	1.00	22.00	110.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCA.....................................................	20	1	131.00	1.00	18.00	112.00	0.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	128.00	2.00	16.00	110.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGC......................................................	19	1	120.00	0.00	0.00	118.00	2.00
.........................................................................................................TAAGCACGCGGTGAATGCCA....................................................	20	1	119.00	0.00	10.00	104.00	5.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	119.00	1.00	46.00	72.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	118.00	0.00	35.00	79.00	4.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	115.00	0.00	18.00	97.00	0.00
........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................	21	1	114.00	0.00	80.00	34.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	113.00	0.00	24.00	87.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGA......................................................	19	1	110.00	0.00	2.00	108.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	109.00	2.00	52.00	55.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGC......................................................	19	1	109.00	0.00	0.00	109.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................	22	1	109.00	0.00	104.00	5.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	107.00	1.00	33.00	73.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	106.00	1.00	48.00	56.00	1.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	104.00	0.00	60.00	44.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	100.00	1.00	21.00	78.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGC......................................................	19	1	98.00	0.00	0.00	98.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	98.00	0.00	28.00	67.00	3.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	95.00	1.00	8.00	85.00	1.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	94.00	1.00	36.00	56.00	1.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	94.00	0.00	9.00	85.00	0.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	94.00	0.00	22.00	72.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCC.....................................................	20	1	92.00	0.00	6.00	86.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGC......................................................	19	1	92.00	0.00	0.00	92.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	89.00	0.00	9.00	80.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	89.00	0.00	30.00	59.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCC.....................................................	20	1	88.00	0.00	9.00	79.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	87.00	0.00	1.00	85.00	1.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	84.00	0.00	56.00	28.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	83.00	0.00	24.00	58.00	1.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	82.00	0.00	22.00	60.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGC......................................................	19	1	81.00	0.00	0.00	81.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	81.00	1.00	31.00	49.00	0.00
........................................................................................................TAAGGCACGCGGTGAATAC......................................................	19	1	80.00	0.00	0.00	80.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCC.....................................................	20	1	79.00	2.00	3.00	69.00	5.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	76.00	2.00	19.00	48.00	7.00
........................................................................................................CAAGGCACGCGGTGAATGCC.....................................................	20	1	75.00	1.00	0.00	74.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGC......................................................	19	1	75.00	0.00	2.00	73.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	75.00	1.00	32.00	41.00	1.00
........................................................................................................TAAGGCAAGCGGTGAATGCC.....................................................	20	1	73.00	2.00	2.00	69.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	72.00	1.00	16.00	55.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	72.00	0.00	15.00	53.00	4.00
........................................................................................................TAAGGCACTCGGTGAATGCCAA...................................................	22	1	70.00	0.00	64.00	6.00	0.00
........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................	21	1	67.00	0.00	27.00	40.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCC.....................................................	20	1	66.00	1.00	7.00	58.00	0.00
......................................................................GGTATCCACTGCAGGCCTATATG....................................................................................	23	1	64.00	0.00	20.00	6.00	38.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	61.00	2.00	32.00	27.00	0.00
........................................................................................................TAAGGCACGCGATGAATGC......................................................	19	1	58.00	0.00	0.00	58.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGC......................................................	19	1	58.00	0.00	0.00	58.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	57.00	0.00	16.00	41.00	0.00
........................................................................................................TAAGGxACGCGGTGAATGCCA....................................................	20	1	54.00	0.00	1.00	53.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGC......................................................	19	1	53.00	0.00	0.00	53.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGC......................................................	19	1	52.00	0.00	0.00	52.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGC......................................................	19	1	52.00	0.00	0.00	52.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	52.00	0.00	21.00	31.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCAA...................................................	22	1	51.00	0.00	43.00	8.00	0.00
........................................................................................................TAAGGCACACGGTGAATGCC.....................................................	20	1	51.00	1.00	7.00	42.00	1.00
........................................................................................................TAAGGCACGCTGTGAATGCCAA...................................................	22	1	50.00	0.00	48.00	2.00	0.00
........................................................................................................TAAGGCACCCGGTGAATGCCA....................................................	21	1	50.00	0.00	24.00	26.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCAA...................................................	22	1	49.00	0.00	41.00	8.00	0.00
........................................................................................................TAAGGCACACGGTGAATGC......................................................	19	1	48.00	0.00	0.00	48.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGC......................................................	19	1	48.00	1.00	0.00	47.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACC.....................................................	20	1	48.00	0.00	3.00	44.00	1.00
........................................................................................................TAAGGCACGCGATGAATGCC.....................................................	20	1	48.00	1.00	0.00	47.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCCAA...................................................	22	1	47.00	0.00	43.00	4.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGC......................................................	19	1	46.00	0.00	0.00	46.00	0.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	46.00	0.00	24.00	21.00	1.00
........................................................................................................TAAGTCACGCGGTGAATGCCAA...................................................	22	1	46.00	0.00	43.00	3.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACAA...................................................	22	1	44.00	0.00	34.00	10.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCAA...................................................	22	1	44.00	0.00	33.00	11.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCC......................................................	19	1	44.00	0.00	3.00	41.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCC.....................................................	20	1	44.00	0.00	5.00	39.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCAA...................................................	22	1	43.00	0.00	41.00	1.00	1.00

droVir3

G-ACAACATT---------------------------CGTGAGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTA-ACAAA------------------AATA	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	29822.00	428.00	28224.00	1080.00	9.00	81.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	9316.00	246.00	8865.00	98.00	5.00	102.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	2328.00	35.00	1931.00	354.00	1.00	7.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	1621.00	45.00	1565.00	3.00	0.00	8.00
......................................................................GGTATCCACTGTAGGCCTCTATG....................................................................................	23	1	1581.00	0.00	34.00	154.00	156.00	1237.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	512.00	6.00	491.00	0.00	0.00	15.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	378.00	10.00	275.00	83.00	5.00	5.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	340.00	0.00	319.00	14.00	0.00	7.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	279.00	2.00	272.00	5.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	243.00	0.00	240.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	196.00	0.00	195.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	131.00	0.00	115.00	16.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	121.00	0.00	112.00	3.00	0.00	6.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	113.00	0.00	112.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	90.00	1.00	87.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	90.00	2.00	86.00	1.00	0.00	1.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	86.00	0.00	82.00	2.00	0.00	2.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	81.00	0.00	80.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	76.00	1.00	62.00	13.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	71.00	0.00	69.00	2.00	0.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	70.00	0.00	65.00	4.00	1.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	65.00	0.00	62.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	60.00	0.00	60.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	56.00	0.00	56.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	55.00	0.00	40.00	15.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	53.00	0.00	52.00	1.00	0.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCCT....................................................	21	1	53.00	0.00	53.00	0.00	0.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	50.00	0.00	50.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	49.00	0.00	47.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCC.....................................................	20	1	46.00	0.00	46.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	46.00	1.00	43.00	2.00	0.00	0.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	45.00	0.00	44.00	0.00	1.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	43.00	0.00	41.00	2.00	0.00	0.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	42.00	0.00	39.00	3.00	0.00	0.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	41.00	0.00	41.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	41.00	0.00	37.00	4.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	40.00	0.00	37.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCCC....................................................	21	1	38.00	0.00	38.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	38.00	0.00	37.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCCC....................................................	21	1	37.00	0.00	37.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	36.00	0.00	34.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGTATGCCA....................................................	21	1	36.00	0.00	36.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	35.00	1.00	34.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	35.00	1.00	32.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	33.00	1.00	32.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	33.00	0.00	33.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	33.00	0.00	33.00	0.00	0.00	0.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	32.00	0.00	31.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	32.00	0.00	31.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	31.00	0.00	17.00	14.00	0.00	0.00
........................................................................................................TAAGGCACGCGGAGTATGCCA....................................................	21	1	31.00	0.00	31.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	31.00	1.00	25.00	5.00	0.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	31.00	1.00	26.00	4.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	30.00	3.00	24.00	3.00	0.00	0.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	29.00	0.00	28.00	1.00	0.00	0.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	29.00	0.00	26.00	3.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................	21	1	28.00	0.00	28.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	28.00	0.00	27.00	1.00	0.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	28.00	0.00	26.00	2.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTCTATT....................................................................................	23	1	28.00	0.00	0.00	19.00	0.00	9.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	28.00	0.00	27.00	1.00	0.00	0.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	27.00	1.00	25.00	1.00	0.00	0.00
........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................	21	1	27.00	1.00	16.00	8.00	0.00	2.00
........................................................................................................TAAGGCACGCGGTGAAGGCC.....................................................	20	1	27.00	1.00	26.00	0.00	0.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	26.00	0.00	25.00	1.00	0.00	0.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	26.00	0.00	25.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	25.00	2.00	18.00	5.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	25.00	0.00	23.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCC.....................................................	20	1	25.00	0.00	24.00	1.00	0.00	0.00
........................................................................................................TAATGCACGCGGTGAATGCCA....................................................	21	1	25.00	3.00	19.00	3.00	0.00	0.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	25.00	0.00	24.00	1.00	0.00	0.00
........................................................................................................CAAGGCACGCGGTGAATGCC.....................................................	20	1	25.00	0.00	25.00	0.00	0.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	24.00	0.00	22.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGGGAATGCCC....................................................	21	1	23.00	0.00	23.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCC....................................................	21	1	22.00	0.00	22.00	0.00	0.00	0.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	22.00	0.00	20.00	2.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	22.00	1.00	17.00	4.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCC.....................................................	20	1	22.00	0.00	22.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................	22	1	21.00	0.00	14.00	7.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCC.....................................................	20	1	21.00	0.00	21.00	0.00	0.00	0.00
........................................................................................................CAAGGCACGCGGGGAATGCCA....................................................	21	1	21.00	0.00	21.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	21.00	0.00	17.00	4.00	0.00	0.00
........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................	21	1	21.00	1.00	19.00	1.00	0.00	0.00
.....................................................................TGGTATCCACTGTAGGCCTCTATG....................................................................................	24	1	21.00	1.00	1.00	9.00	0.00	10.00
........................................................................................................TAAGGCACGCGGACAATGCCA....................................................	21	1	20.00	0.00	20.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCC.....................................................	20	1	20.00	0.00	20.00	0.00	0.00	0.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	20.00	0.00	16.00	4.00	0.00	0.00
........................................................................................................TAAGGCACGCGGCGAAGGCC.....................................................	20	1	19.00	0.00	18.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................	21	1	19.00	0.00	18.00	1.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCT.........................................................................................	18	1	19.00	0.00	0.00	0.00	0.00	19.00
........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................	21	1	19.00	0.00	16.00	3.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTCTAT.....................................................................................	22	1	18.00	1.00	2.00	4.00	1.00	10.00
........................................................................................................TAAGGCACGCGGAGTATGCC.....................................................	20	1	18.00	0.00	18.00	0.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTCT.......................................................................................	20	1	18.00	0.00	2.00	2.00	0.00	14.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	18.00	0.00	18.00	0.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	17.00	0.00	16.00	1.00	0.00	0.00
......................................................................GGTATCCACTGTAGGCCTCTA......................................................................................	21	1	17.00	0.00	0.00	1.00	2.00	14.00
........................................................................................................TAAGGCACGGGGTGAATGCCA....................................................	21	1	17.00	0.00	16.00	1.00	0.00	0.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	17.00	0.00	17.00	0.00	0.00	0.00
..........................................................................TCCACTGTAGGCCTCTATG....................................................................................	19	1	17.00	0.00	0.00	0.00	0.00	17.00
........................................................................................................TAAGGCAGGCGGTGAATGCCA....................................................	21	1	16.00	0.00	16.00	0.00	0.00	0.00

droMoj3

CGACAA--TTGCCCTGCGCTCAGCGTGCGGGACTCGCCGTGAGTGACGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAAT----------------------CCAACA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	86109.00	883.00	49784.00	31674.00	3768.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	26256.00	343.00	15092.00	10559.00	262.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	8274.00	75.00	2903.00	1813.00	3483.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	4115.00	133.00	2282.00	1691.00	9.00
........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................	21	1	2192.00	11.00	1328.00	847.00	6.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	2044.00	30.00	926.00	600.00	488.00
........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................	21	1	1330.00	0.00	224.00	1034.00	72.00
........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................	21	1	978.00	0.00	270.00	663.00	45.00
......................................................................GGTATCCACTGTAGGCCTCTATG....................................................................................	23	1	762.00	8.00	27.00	23.00	704.00
........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................	21	1	514.00	0.00	347.00	156.00	11.00
........................................................................................................TAAGGCACGCGGTGCATGCC.....................................................	20	1	424.00	0.00	72.00	349.00	3.00
........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................	21	1	393.00	0.00	108.00	278.00	7.00
........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................	22	1	321.00	0.00	17.00	131.00	173.00
........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................	21	1	295.00	1.00	211.00	75.00	8.00
........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................	21	1	271.00	1.00	165.00	94.00	11.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	263.00	0.00	143.00	111.00	9.00
........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................	21	1	226.00	0.00	148.00	74.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................	23	1	219.00	2.00	87.00	50.00	80.00
........................................................................................................TAAGGCACGCGGTGAATG.......................................................	18	1	217.00	3.00	125.00	83.00	6.00
........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................	21	1	186.00	0.00	107.00	70.00	9.00
........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................	21	1	184.00	2.00	47.00	133.00	2.00
........................................................................................................TAACGCACGCGGTGAATGCCA....................................................	21	1	179.00	0.00	107.00	71.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	168.00	0.00	90.00	72.00	6.00
........................................................................................................TAAGGCACGCGGCGAATGCC.....................................................	20	1	167.00	2.00	114.00	51.00	0.00
........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................	21	1	163.00	1.00	92.00	62.00	8.00
........................................................................................................TAAGGCACGCGGTGACTGCC.....................................................	20	1	151.00	0.00	44.00	104.00	3.00
........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................	21	1	146.00	0.00	84.00	56.00	6.00
........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................	21	1	140.00	0.00	12.00	120.00	8.00
........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................	22	1	140.00	1.00	90.00	45.00	4.00
........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................	21	1	138.00	0.00	76.00	49.00	13.00
........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................	21	1	133.00	0.00	84.00	45.00	4.00
........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................	21	1	131.00	1.00	51.00	75.00	4.00
........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................	21	1	131.00	0.00	75.00	49.00	7.00
........................................................................................................TAACGCACGCGGTGAATGCCT....................................................	21	1	129.00	0.00	82.00	47.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................	22	1	124.00	0.00	16.00	52.00	56.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................	23	1	119.00	0.00	66.00	39.00	14.00
........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................	21	1	118.00	2.00	43.00	68.00	5.00
........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................	21	1	116.00	0.00	62.00	51.00	3.00
........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................	21	1	114.00	0.00	72.00	33.00	9.00
.........................................................................................................AAGGCACGCGGTGAATGCCA....................................................	20	1	114.00	2.00	70.00	37.00	5.00
........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................	21	1	106.00	2.00	54.00	45.00	5.00
........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................	21	1	105.00	0.00	33.00	63.00	9.00
........................................................................................................TAAGGCACGCGGTGAATACCA....................................................	21	1	103.00	0.00	50.00	53.00	0.00
........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................	21	1	102.00	1.00	73.00	22.00	6.00
........................................................................................................TAAGGCACGCGGTGAACGCC.....................................................	20	1	102.00	0.00	57.00	44.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................	24	1	102.00	4.00	61.00	30.00	7.00
........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................	21	1	99.00	0.00	72.00	23.00	4.00
.......................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................	22	1	98.00	0.00	58.00	34.00	6.00
........................................................................................................TAAGGCACACGGTGAATGCCA....................................................	21	1	95.00	0.00	56.00	35.00	4.00
........................................................................................................TAACGCACGCGGTGAATGCC.....................................................	20	1	92.00	0.00	56.00	36.00	0.00
........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................	21	1	92.00	0.00	61.00	30.00	1.00
........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................	21	1	89.00	0.00	49.00	36.00	4.00
........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................	21	1	88.00	0.00	9.00	75.00	4.00
........................................................................................................TAAGGCACGCGGGGAATGCC.....................................................	20	1	81.00	0.00	60.00	20.00	1.00
........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................	21	1	79.00	0.00	39.00	38.00	2.00
........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................	21	1	79.00	0.00	42.00	34.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCT.....................................................	20	1	79.00	0.00	43.00	36.00	0.00
........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................	21	1	78.00	0.00	38.00	28.00	12.00
........................................................................................................TAAGACACGCGGTGAATGCCA....................................................	21	1	76.00	0.00	48.00	24.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................	22	1	74.00	0.00	25.00	33.00	16.00
........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................	21	1	73.00	0.00	44.00	26.00	3.00
.....................................................................TGGTATCCACTGTAGGCCTCTATG....................................................................................	24	1	73.00	1.00	5.00	6.00	61.00
........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................	21	1	73.00	0.00	51.00	16.00	6.00
........................................................................................................TAAGGCACGCGGTGAATTCC.....................................................	20	1	67.00	1.00	18.00	48.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCA.....................................................	20	1	67.00	3.00	42.00	20.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	67.00	1.00	48.00	14.00	4.00
........................................................................................................TAAGGCACGCGGTGAATGAC.....................................................	20	1	66.00	1.00	33.00	32.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................	21	1	66.00	2.00	40.00	21.00	3.00
........................................................................................................TAAGGCACGCGGTGCATGC......................................................	19	1	65.00	0.00	5.00	60.00	0.00
........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................	21	1	64.00	1.00	35.00	23.00	5.00
........................................................................................................TAAGGCACGCGGTGGATGCC.....................................................	20	1	60.00	0.00	30.00	30.00	0.00
........................................................................................................TAAGGCACGCGGAGAATGCC.....................................................	20	1	60.00	1.00	42.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................	23	1	59.00	0.00	6.00	37.00	16.00
........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................	21	1	56.00	1.00	22.00	30.00	3.00
........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................	21	1	53.00	2.00	18.00	33.00	0.00
........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................	21	1	53.00	0.00	37.00	15.00	1.00
........................................................................................................TAAGGCACGCGGTAAATGCC.....................................................	20	1	53.00	0.00	24.00	28.00	1.00
........................................................................................................TAAGGCACGCGGTGCCTGCCA....................................................	21	1	53.00	0.00	8.00	44.00	1.00
........................................................................................................TAGGGCACGCGGTGAATGCC.....................................................	20	1	52.00	0.00	25.00	27.00	0.00
........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................	21	1	52.00	0.00	20.00	29.00	3.00
........................................................................................................TAAGGCACGCGATGAATGCCA....................................................	21	1	52.00	1.00	27.00	20.00	4.00
........................................................................................................TAAGGCACGCCGTGAATGCCA....................................................	21	1	51.00	0.00	24.00	23.00	4.00
........................................................................................................TAAGGCACGCGGTGACTGCCC....................................................	21	1	51.00	0.00	8.00	41.00	2.00
........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................	21	1	51.00	1.00	30.00	18.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGCCATT..................................................	23	1	48.00	0.00	37.00	11.00	0.00
........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................	21	1	47.00	0.00	34.00	13.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGTC.....................................................	20	1	47.00	0.00	25.00	21.00	1.00
........................................................................................................CAAGGCACGCGGTGAATGCC.....................................................	20	1	46.00	0.00	28.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGGC.....................................................	20	1	44.00	0.00	16.00	27.00	1.00
........................................................................................................TAAGGCACGCGGTGAGTGCC.....................................................	20	1	44.00	0.00	32.00	12.00	0.00
........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................	23	1	44.00	0.00	13.00	22.00	9.00
........................................................................................................TAAGGCACGCGGTGAAAGCC.....................................................	20	1	41.00	0.00	25.00	15.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGT......................................................	19	1	41.00	3.00	27.00	11.00	0.00
........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................	21	1	41.00	1.00	25.00	15.00	0.00
........................................................................................................TAAGGCACGCGGTGACTGCCT....................................................	21	1	41.00	0.00	25.00	16.00	0.00
........................................................................................................TAAGGCACGCGGTGAAGGCC.....................................................	20	1	41.00	0.00	26.00	15.00	0.00
........................................................................................................TAAGGCACGCGGTCAATGCC.....................................................	20	1	40.00	0.00	23.00	17.00	0.00
........................................................................................................TAAGGCACGCGGTGTATGCC.....................................................	20	1	40.00	0.00	22.00	18.00	0.00
........................................................................................................TAAGGCACGCGGTGCATGCCT....................................................	21	1	39.00	0.00	8.00	30.00	1.00
........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................	21	1	39.00	0.00	23.00	15.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGGCT....................................................	21	1	37.00	0.00	16.00	21.00	0.00

droGri2

G-T----------------GGTG----------------TGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCATTCA-------AATATA--ACCAGCA	Size	Hit Count	Total Norm	V109 Male body
........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................	21	1	65.00	65.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................	23	1	14.00	14.00
........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................	22	1	9.00	9.00
........................................................................................................TAAGGCACGCGGTGAATGCC.....................................................	20	1	4.00	4.00
.....................................................................TGGTATCCACTGTAGGCCTCTATG....................................................................................	24	1	3.00	3.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................	24	1	2.00	2.00
........................................................................................................TAAGGCACGCGGTGAATGACA....................................................	21	1	2.00	2.00
........................................................................................................TAAGGCACGCGGTGAATTCCAAG..................................................	23	1	1.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................	23	1	1.00	1.00
........................................................................................................TAAGGCCCGCGGTGAATGCCA....................................................	21	1	1.00	1.00
........................................................................................................TAAGGCACGCGGTGAATGC......................................................	19	1	1.00	1.00
.....................................................................TGGTATCCACTGTAGGCCTCTAT.....................................................................................	23	1	1.00	1.00
......................................................................GGTATCCACTGTAGGCCTCTATG....................................................................................	23	1	1.00	1.00
........................................................................................................TAAGGCACGCGGTGAATCCCAAG..................................................	23	1	1.00	1.00
........................................................................................................TACGGCACGCGGTGAATGCCA....................................................	21	1	1.00	1.00
........................................................................................................TAAGGCACGCGGTGAATTCCAA...................................................	22	1	1.00	1.00
........................................................................................................TAAGGCACACGGTGAATGCCAA...................................................	22	1	1.00	1.00
........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................	21	1	1.00	1.00

Generated: 04/20/2012 at 05:33:06 EDT

dme-mir-124

chr2L:17566370-17566469 +

Known_mirbase

intergenic

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup