dme-mir-1017- 12- and 20-way alignments

dme-mir-1017	chr3R:20314334-20314502 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	tailed_mirtron

Legend:

   mature strand at position 20314379-20314401
   star strand at position 20314334-20314352
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3R:20314319-20314517 +	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCCGAAAA-TGA--------------------------------------T----CCCTTTC-TCCCCTTTTCCCAACACA--T------------TTGT----------------------------------ATCCC-----ACTTCCTGCGCGTCTTCGTGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAACA
droSim1	chr3R:20155121-20155319 +	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTCTC-TCCCCTTTTCCCGACACT--T------------TTGT----------------------------------AACCC-----ACTTCCTGCACGACTTCATGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAATA
droSec1	super_0:20650438-20650636 +	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTCTC-TCCCCTTTTCCTCACACA--C------------TTGT----------------------------------ATCCC-----ACTTCCTGCGCGACTTCATGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAACA
droYak2	chr3R:26186848-26187051 -	CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAAATA--------------------------------------T----CCCTTTC-CCTCTTTTTTCCAACACATTC------------TTGT----------------------------------ATCCC-----ACTTTTTTTGCGCCTTCTTGGATGT-----------------------GTGA------CTGCTGC-AATGG------CCATGGACTGTT-TAGATATCTTCTTCAATA
droEre2	scaffold_4820:7744417-7744612 -	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTTTC---CCCCTTTCCCAACACA--C------------TTGT----------------------------------ATCCC-----ACTTCTCGCGCGAC-TCTTGGACTT-----------------------GTGG------CTGCTTC-ACTGG------C--TGGACTATT-TAGATATCTTCTTCAACA
droAna3	scaffold_13088:356279-356461 +	CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCTC-------ATCGCCGGCCC-----------TTTCGCGAAAGCTCTACCCAAACTCATCCCCTGAAAACC-------------------------------------------TTTTTTC-C------------CCCCATT--T------------TCTT----------------------------------CCCTT-----ACTGTTTTTGCAC---TTTGGATTT--------------------TATGTGGC-----CTGC------TGG------A--TGGCTTCTT-CAGATATATTTTTCAACA
dp4	chr2:18479367-18479560 -	CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTAACA-------ATCGCCGACAATC----A--AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAA-------------------------------------------TTGTTTTCCT-CC---------CCCACCAAA--AATCTCCCTCACCCTGT----------------------------------AAATC-----ACT-------------------------------------------ATGCGGCT---GCTGC------TGGTATTCGGCTTGGACTGTTCCAGATATCTTCTTCAATA
droPer1	super_3:1203012-1203205 -	CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTTACA-------ATCGCCGACAATC----A--AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAA-------------------------------------------TTGTTTTCCT-CC---------CCCACCAAA--AATCTCCCTCTCCCTGT----------------------------------AAATC-----ACT-------------------------------------------ATGCGGCT---GCTGC------TGGTATTCGGCTTGGACTGTTCCAGATATCTTCTTCAATA
droWil1	scaffold_181108:4383442-4383643 -	CTGAACCATATCCAGGTGAGTTTTGTAGAGTTTTAAAGCTATAA-------ATCGCCGGTAAATAGACGTTAAAGACGCGAAAGCTCTACCCAAACTCAC-CCCGG-AAA------------------------------------------TTTTTTTATT-C-T-CTTTTTTCCCAACAAA--A------------ATAA----------------------------------TGACA-----ATTT-------A---TCTTGGAAAT--------------------TTGGTAA------ACACTTTAAATAA------T--TGTATATAT-TAGATATATTTTTCAATA
droVir3	scaffold_13047:3684405-3684633 +	CCGAGCCGTATCCGGGTGAGTTTCGTAGAGTT-TAAAGCTCTTA--CTTTGCTCGCTGGCAC----GC-----CCACGCGAAAGCTCTACCCAAACTCAC--TATGCAAACCCCCAACCCATACCCAAATCCA--------------------------------------------------------------------------------TGCTCCTTGtctctctctctctctctttctctc-----tctctct-------------ctctctctcCACTTTTGTTTCATGCTGCAC---TCGC------TGGCTCTTG---TTGAATGTT-CAGACATATTCTTTAATA
droMoj3	scaffold_6540:20694202-20694463 +	CCGAGCCCTATCCCGGTGAGTTTCGTAGAGTT-TAAAGCTCACA--CTTTGCTCGCCAACAA----GC-----GCACGCGAAAGCTCTACCCAAACTCAC--TATGAAAATCTATACTCCAAACCCGAATCCAATCTTCGTGGATTCCATCATCGTGtctct-ct---------ctctctctc--tctctctc-----------------------------------------------------tctctctgtttgtctttctggatctctttctttctTTTGGTATTTCATGCTGCTC---TCGC------TGGCCTTG-A--TCAAATGTT-CAGACATCTTCTTCAACA
droGri2	scaffold_14906:340737-340980 +	CGGAACCGTATCCGGGTGAGTTTCGTAGGGTT-TAAAGCAACAAAACTTTGCTCGCCGACAC----GC-----GTACGCGAAAGCTCTACCCAAACTCAC--TATGGAAACC-----------------------------------------CGTATCCCA-AC---------CCCCCAAAT--AATCC-----AACCAATATCCCAATCCTGGCCTGTTCGTTCTCGTGTTCTTTGCTTTTCTC-----TTCTGCTCTTTCTTG-------------------------CCTGCTGCGATTGCTGCTT------GTTTTG-C--TAAAATGTT-TAGACATATTCTTCAATA

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3R:20314319-20314517 +	NA	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCCGAAAAT-GA---TC-----------------------------------------CC-----TTTCTCCCCTTTTC--CCAA----CACA-----------TTT-------G------------------------------------------------------TATCCCACTTCCT--GCG----------------------------------CGTCTTCGTGGATTTGTA---ACTGCTT------------CAA--TGG------------------CTGGACGGTT-TAGATATCTTCTTCAACA
droSim1	chr3R:20155121-20155319 +	5	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAA-TA---TC-----------------------------------------CC-----TCTCTCCCCTTTTC--CCGA----CACT-----------TTT-------G------------------------------------------------------TAACCCACTTCCT--GCA----------------------------------CGACTTCATGGATTTGTA---ACTGCTT------------CAA--TGG------------------CTGGACGGTT-TAGATATCTTCTTCAATA
droSec1	super_0:20650438-20650636 +	1	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAA-TA---TC-----------------------------------------CC-----TCTCTCCCCTTTTC--CTCA----CACA-----------CTT-------G------------------------------------------------------TATCCCACTTCCT--GCG----------------------------------CGACTTCATGGATTTGTA---ACTGCTT------------CAA--TGG------------------CTGGACGGTT-TAGATATCTTCTTCAACA
droYak2	chr3R:26186848-26187051 -	19	CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAAATA---TC-----------------------------------------CC-----TTTCCCTCTTTTTT--CCAA----CACATT---------CTT-------G------------------------------------------------------TATCCCACTTTTT--TTG----------------------------------CGCCTTCTTGGATGTGTG---ACTGCTG------------CAA--TGGCC----------------ATGGACTGTT-TAGATATCTTCTTCAATA
droEre2	scaffold_4820:7744417-7744612 -	16	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAA-TA---TC-----------------------------------------CC-----TTTCC--CCCTTTC--CCAA----CACA-----------CTT-------G------------------------------------------------------TATCCCACTTCTC--GCG----------------------------------CGAC-TCTTGGACTTGTG---GCTGCTT------------CAC--TGG------------------CTGGACTATT-TAGATATCTTCTTCAACA
droEug1	scf7180000409881:35440-35632 +	9	CTGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCCT-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAACA----TTTTC-----------------------------------------CT-----ACCCTC------TCCTCCAA--------------C---T-TTGC--------------------------------------------------TTT----------ACTATTCCTA--CCG----------------------------------CGACTTTTTGGATTTTTG---ACTGGTT------------AAA--TGT------------------CTGGCCTGTA-CAGACATCTTCTTTAACA
droBia1	scf7180000302136:685749-685941 +	2	CGGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGC---CC-------ATCGCCTGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA----ATTGT-----------------------------------------CC-----TCCCTC------TCC--CC-CCAAAA--------C---TTTT-------A------------------------------------------------------CCATCTTTTTTCA--CCG----------------------------------CAACTTCTTGGATTTTTG---ACTGGTT------------TGA--TGG------------------CTGGCCTGTT-CAGATATCTTCTTTAACA
droTak1	scf7180000415769:2087499-2087712 -	19	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCGGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCCAAAAAA-CATTTTC-----------------------------------------CC-----TCCCT---CTTTTC--CCC-----CAAA-----AAAAAT---------------------------------------------------ATTTATTTATCA--TATGCAATATCAT--ACG----------------------------------CAACTTCTTGGACTTGTA---ACTGTTT------------T----TGGCC--------------AACTGGCCTGTT-CAGATATCTTCTTCAATA
droEle1	scf7180000491047:474866-475065 -	15	CGGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCCC-------ATCGCCGGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTCAAAA----TCTCT-----------------------------------------CT------CC----CCCTCTC--CCGT----T--G-----AT---T-CT--ATCCCATT-------------------------------------------TC----------TCCATTTCAC--CTG----------------------------------CGACAACTGGGATTTGTG---ACTGATT------------TAA--TGC------------------CTGACTTGCT-CAGATATCTTCTTCAATA
droRho1	scf7180000777890:62046-62235 +	4	CGGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCCC-------ATCGCCGACAA-----------TGACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA----TTTCT-----------------------------------------CT------CCCTC------TC--CCTT----T--G-----AT---T-CT-----------------------------------------------------GT----------GATATTTCTC--CTG----------------------------------CGATGTCTTGGATTTCTG---ACTGATT------------TAA--TGC------------------CTGACTTGTG-CAGATATCTTCTTCAATA
droFic1	scf7180000453912:1499652-1499841 +	1	CGGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCCC-------ATCGCCGACAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTCAAAA----AATAT-----------------------------------------CT------ACCCC--TCTTT---CCTA----CAAC-------------------------------------------------------------------TC------------TATTTCTATTTTG----------------------------------CTGCTTCCTGGATTTGTG---ACTGGTT------------TAA--TGA------------------CTGGTTTAAT-CAGATATCTTCTTCAACA
droKik1	scf7180000302387:220847-221037 +	2	CGGAGCCCTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCCTCCA-------ATCGCCGGCAA-----------TTGCGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA----TTTCT-----------------------------------------AC------CCTAC------TC--CCT-GT------------A---T-TT--ATCC----------------------------------------------CTC------------GATTTCTC--TGG----------------------------------TGAT-----------------------------------GTCCTCTGGCTACTGAATTGAAATGAACTGGCTTGTT-CAGATATCTTCTTCAATA
droAna3	scaffold_13088:356279-356461 +	1	CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCTC-------ATCGCCGGCCC-----------TTTCGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA----CCTTT-----------------------------------------TT------TCCCC-------------C----C--ATTTTCTT-------CC--------------------------------------------------CTT----------ACTGTTT-----TTGCACTTTGGAT--------------------TTTA--------------TGTG---GC----C------------TGC--TGG------------------ATGGCTTCTT-CAGATATATTTTTCAACA
droBip1	scf7180000396413:412907-413093 +	3	CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCTC-------ATCGCCGGCCC-----------TTTCGCGAAAGCTCTACCCAAACTCATCCCCCGAAAA----AATAC-----------------------------------------CT-----TCTTTCCCC--------CC--------ATTTTCTT-------CC--------------------------------------------------TTT----------ACTGTTT-----TTGCTTTTCGGAT--------------------AT--------------TTTGTG---GCCGCTT------------CGA--TTA----------------------CTTGTT-CAGATATATTCTTCAACA
dp4	chr2:18479367-18479560 -	13	CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTAACA-------ATCGCCGACAATCA------AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAAT------TGT-----------------------------------------TTTCCTC------------CCC--CA-CCAA---A-----AA---T---------------------------------------------------CTCCCTC-ACCCTGTAAATCA------------------------------------------CTA--------------TGCG---GCTGCTG---------CTGGTATTCGGC-----------------TTGGACTGTTCCAGATATCTTCTTCAATA
droPer1	super_3:1203012-1203205 -	15	CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTTACA-------ATCGCCGACAATCA------AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAAT------TGT-----------------------------------------TTTCCTC------------CCC--CA-CCAA---A-----AA---T---------------------------------------------------CTCCCTC-TCCCTGTAAATCA------------------------------------------CTA--------------TGCG---GCTGCTG---------CTGGTATTCGGC-----------------TTGGACTGTTCCAGATATCTTCTTCAATA
droWil1	scaffold_181108:4383442-4383643 -	17	CTGAACCATATCCAGGTGAGTTTTGTAGAGTTTTAAAGCTATAA-------ATCGCCGGTAAATAGACGTTAAAGACGCGAAAGCTCTACCCAAACTCAC-CCCGGAAAT-----TTTT-----------------------------------------TT-----ATTCTC-TTTTTTC--CCAA----CAAA-----------AAT-------A------------------------------------------------------ATGACAATTT----------------------------------------------ATCTTGGAAATTTGGTAAACACTT----------T-AAA--TAA------------------TTGTATATAT-TAGATATATTTTTCAATA
droVir3	scaffold_13047:3684405-3684633 +	4	CCGAGCCGTATCCGGGTGAGTTTCGTAGAGTT-TAAAGCTCTTA--CTTTGCTCGCTGGCAC----GC-----CCACGCGAAAGCTCTACCCAAACTCAC--TATGCAAA----CCCCCAACCCATACCCAAATCCA--------------------------------------------------------------------------------------------TGCTCCTTGTCTCTCTCTCTCTCTCTTTCTCTCTC----------------------TCT----------CTCTCTCTCTCCACTTTTGTTTCA-----------------------TGCTGCACTCGC---TGGCTCTTG--------------------TTGAATGTT-CAGACATATTCTTTAATA
droMoj3	scaffold_6540:20694202-20694463 +	9	CCGAGCCCTATCCCGGTGAGTTTCGTAGAGTT-TAAAGCTCACA--CTTTGCTCGCCAACAA----GC-----GCACGCGAAAGCTCTACCCAAACTCAC--TATGAAAA----TCTATACTCCAAACCCGAATCCAATCTTCGTGGATTCCATCATCGTGTCTCTC------------TCT--CT-CTCT---C-----TC---T---------------------------------------------------CTCTCTC-TCTCTGTTTGTCT-------------TTCTGGATCTCTTTCTTTCTTTTGGTATTTCA-----------------------TGCTGCTCTCGC---TGGCCTT--G------------------ATCAAATGTT-CAGACATCTTCTTCAACA
droGri2	scaffold_14906:340737-340980 +	2	CGGAACCGTATCCGGGTGAGTTTCGTAGGGTT-TAAAGCAACAAAACTTTGCTCGCCGACAC----GC-----GTACGCGAAAGCTCTACCCAAACTCAC--TATGGAAA----CCCGT-----------------------------------------ATCCCAA------------CCC--CC-CAAA---T-----AA---T-CC--AACCAATATCCCAATCCTGGCCTGTTCGTTCTCGTGTTCTTTGCTTTTCT--------------------CTT--CTG----------------------------------CTCTTTCTTG-----------CCTGCTGCGATTGCTGCTTGTT--TTG------------------CTAAAATGTT-TAGACATATTCTTCAATA

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCCGAAAA-TGA--------------------------------------T----CCCTTTC-TCCCCTTTTCCCAACACA--T------------TTGT----------------------------------ATCCC-----ACTTCCTGCGCGTCTTCGTGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAACA

Size

Hit Count

Total Norm

droSim1

CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTCTC-TCCCCTTTTCCCGACACT--T------------TTGT----------------------------------AACCC-----ACTTCCTGCACGACTTCATGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAATA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	292.00	16.00	244.00	1.00	31.00
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	108.00	8.00	89.00	0.00	11.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	99.00	8.00	67.00	2.00	22.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	15.00	0.00	14.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	14.00	1.00	10.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACT.................................................................................................................................................................................................................................................................	18	1	5.00	0.00	5.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	4.00	1.00	2.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	25	1	2.00	0.00	2.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	21	1	2.00	0.00	2.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTC................................................................................................................................................................................................................................................................	19	1	2.00	0.00	2.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	2.00	0.00	2.00	0.00	0.00
...............................................................................GAAAGCTCTACCCTAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGxxCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCCCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............GTGAGTTTAGTGGAGTT-T................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTAxCCAAACTCATC.............................................................................................................................................................................................................................................................	21	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATGC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCAC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAACCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCACCT............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
.....................................................................................TCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	18	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCTAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCG...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCCAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAACCTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAGGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCGAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAAATCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCA...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAATTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTAACCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAAATCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
......................................................................................................................................................................................T--T------------TTGx----------------------------------AACCC-----ACTTACTG....................................................................................................	18	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAGCC............................................................................................................................................................................................................................................................	23	1	1.00	1.00	0.00	0.00	0.00

droSec1

CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTCTC-TCCCCTTTTCCTCACACA--C------------TTGT----------------------------------ATCCC-----ACTTCCTGCGCGACTTCATGGATTT-----------------------GTAA------CTGCTTC-AATGG------C--TGGACGGTT-TAGATATCTTCTTCAACA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	177.00	4.00	15.00	158.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	95.00	1.00	14.00	80.00
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	95.00	4.00	14.00	77.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	16.00	2.00	0.00	14.00
...............................................................................GAAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	20	1	8.00	0.00	0.00	8.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	5.00	0.00	0.00	5.00
...............GTGAGTTTAGTGGAGTT-TA...............................................................................................................................................................................................................................................................................................................................	19	1	3.00	1.00	1.00	1.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	3.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCCA...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCACCC............................................................................................................................................................................................................................................................	23	1	2.00	0.00	0.00	2.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	2.00	0.00	0.00	2.00
...............................................................................GAAAGCTCTATCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	1.00
...............................................................................GAAACCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	19	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAA..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00
...............................................................................GAAAGCCCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	1.00
................................................................................AAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCATCAC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	1.00
...............GTGAGCTTAGTGGAGTT-TAAA.............................................................................................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
...............................................................................GTAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTC................................................................................................................................................................................................................................................................	19	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCGAACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCATT.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCGTCCC...........................................................................................................................................................................................................................................................	24	1	1.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCTAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00
............................................................................................................................................................................................................................................ATxCC-----AGTTCCTGCGCGACT.............................................................................................	19	1	1.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCC...............................................................................................................................................................................................................................................................	20	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACTCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00
................TGAGTTTAGTGGAGTT-TAA..............................................................................................................................................................................................................................................................................................................................	19	1	1.00	0.00	0.00	1.00
...............GTGAGTTTAGTGGAGTT-TAAAGCTTC........................................................................................................................................................................................................................................................................................................................	26	1	1.00	0.00	0.00	1.00
...............GTGAGTTTAGTGGAGTT-TAAAGCTTCC.......................................................................................................................................................................................................................................................................................................................	27	1	1.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCA..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCxAACTCC...............................................................................................................................................................................................................................................................	19	1	1.00	0.00	0.00	1.00
................................................................................GAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
..............................................................................CGAAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00
................................................................................AAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00
...............................................................................GAAAGCACTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00
...............................................................................GAAATCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCAAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00

droYak2

CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAAAATA--------------------------------------T----CCCTTTC-CCTCTTTTTTCCAACACATTC------------TTGT----------------------------------ATCCC-----ACTTTTTTTGCGCCTTCTTGGATGT-----------------------GTGA------CTGCTGC-AATGG------CCATGGACTGTT-TAGATATCTTCTTCAATA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	153.00	6.00	4.00	0.00	26.00	117.00
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	82.00	4.00	6.00	0.00	32.00	40.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	51.00	6.00	5.00	0.00	9.00	31.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	17.00	0.00	0.00	0.00	1.00	16.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	13.00	0.00	0.00	0.00	8.00	5.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	25	1	8.00	0.00	0.00	0.00	0.00	8.00
...............................................................................GAAAGCTCTACCCAAACTCACCC............................................................................................................................................................................................................................................................	23	1	6.00	0.00	0.00	0.00	0.00	6.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	6.00	0.00	0.00	0.00	3.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCC..........................................................................................................................................................................................................................................................	25	1	5.00	0.00	1.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCACACTCATCCC...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCA...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	0.00	1.00	2.00
...............................................................................GAAAGCTCTACCCAAACTCACCCC...........................................................................................................................................................................................................................................................	24	1	2.00	0.00	0.00	0.00	0.00	2.00
...............................................................................GAAAGCTCTACCCAAACTCACCCT...........................................................................................................................................................................................................................................................	24	1	2.00	0.00	0.00	0.00	0.00	2.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCCT.........................................................................................................................................................................................................................................................	26	1	2.00	0.00	0.00	0.00	0.00	2.00
...............................................................................GAAAGCTCTACCCACACTCATC.............................................................................................................................................................................................................................................................	22	1	2.00	0.00	0.00	0.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCCTC.............................................................................................................................................................................................................................................................	22	1	2.00	0.00	2.00	0.00	0.00	0.00
...............GTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------...............................................................................................................................................................................................................................................................................................................	28	1	1.00	0.00	0.00	0.00	1.00	0.00
...............GTGAGTTTAGTGGAGTT-TGA..............................................................................................................................................................................................................................................................................................................................	20	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAACGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCACACTCAGCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCACACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............GTGAGTTTAGTGGAGTT-TA...............................................................................................................................................................................................................................................................................................................................	19	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAGGCTCTACTCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAACTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAGACTTATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCCCACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
.......................................................................................................................................................................................................................................................................TTGGGCGT-----------------------GTGA------CTGCTG............................................	18	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTAATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCACC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................AAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACACATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACT.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	0.00	1.00
................................................................................AAAGCTCTACCCACACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAACTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTGTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCGTCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCGAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACCT............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACCCGTC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAGACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCCCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATA.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCCTCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCCAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCCAACTCCT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCTAAACGCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
..............................................................................CGAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAGACTCCT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCAAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00

droEre2

CCGAACCGTATCCGGGTGAGTTTAGTGGAGTT-TAAAGCTTCCC-------ATCGCCAGCAA-----------TTACGCGAAAGCTCTACCCAAACTCATCCCCTGAAAA-ATA--------------------------------------T----CCCTTTC---CCCCTTTCCCAACACA--C------------TTGT----------------------------------ATCCC-----ACTTCTCGCGCGAC-TCTTGGACTT-----------------------GTGG------CTGCTTC-ACTGG------C--TGGACTATT-TAGATATCTTCTTCAACA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	570.00	25.00	26.00	0.00	519.00
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	529.00	21.00	19.00	0.00	489.00
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	217.00	3.00	12.00	0.00	202.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	39.00	0.00	2.00	0.00	37.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	17.00	3.00	3.00	0.00	11.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	13.00	0.00	2.00	0.00	11.00
...............................................................................GAAAGCTCTACCCAAACTCATCCA...........................................................................................................................................................................................................................................................	24	1	13.00	0.00	0.00	0.00	13.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	12.00	0.00	1.00	0.00	11.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	12.00	2.00	0.00	0.00	10.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	10.00	0.00	0.00	0.00	10.00
...............................................................................GAAAGCTCTACCAAAACTCATCC............................................................................................................................................................................................................................................................	23	1	10.00	0.00	0.00	0.00	10.00
...............................................................................GAAAGCTCTACCCAAACTCATCAC...........................................................................................................................................................................................................................................................	24	1	9.00	0.00	0.00	0.00	9.00
...............................................................................GAAAGCTCTACCCAAACTAATCCC...........................................................................................................................................................................................................................................................	24	1	7.00	0.00	0.00	0.00	7.00
...............................................................................GAAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	20	1	7.00	1.00	0.00	0.00	6.00
...............................................................................GAAAGCTCTACACAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	6.00	0.00	0.00	0.00	6.00
...............................................................................GAAATCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	6.00	1.00	0.00	0.00	5.00
...............................................................................GAAAGCTCTACCAAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	5.00	0.00	0.00	0.00	5.00
...............................................................................GAAAGCTCTACCCAAACTCATAC............................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCATT.............................................................................................................................................................................................................................................................	22	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCC..........................................................................................................................................................................................................................................................	25	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACACAAACTCATCC............................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCATCG............................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
................................................................................AAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	21	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCACCCC...........................................................................................................................................................................................................................................................	24	1	3.00	1.00	0.00	0.00	2.00
...............GTGAGTTTAGTGGAGTT-TAAAGCTTCC.......................................................................................................................................................................................................................................................................................................................	27	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCACACTCATCCC...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	2.00	0.00	1.00
...............................................................................GAAAGCTCTACTCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCA..........................................................................................................................................................................................................................................................	25	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTATACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAATCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAAATCATCC............................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00

droAna3

CCGAGCCGTATCCGGGTGAGTTTAGTGGAGTT-TAATGCTTCTC-------ATCGCCGGCCC-----------TTTCGCGAAAGCTCTACCCAAACTCATCCCCTGAAAACC-------------------------------------------TTTTTTC-C------------CCCCATT--T------------TCTT----------------------------------CCCTT-----ACTGTTTTTGCAC---TTTGGATTT--------------------TATGTGGC-----CTGC------TGG------A--TGGCTTCTT-CAGATATATTTTTCAACA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	41.00	1.00	36.00	2.00	2.00
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	38.00	0.00	31.00	6.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	37.00	1.00	27.00	9.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	22.00	0.00	21.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	20	1	6.00	0.00	4.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	5.00	0.00	4.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCA...........................................................................................................................................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTC................................................................................................................................................................................................................................................................	19	1	2.00	0.00	2.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCC..........................................................................................................................................................................................................................................................	25	1	2.00	0.00	1.00	0.00	1.00
...............................................................................GAAAGCTCTACCAAAACTCATCC............................................................................................................................................................................................................................................................	23	1	2.00	0.00	2.00	0.00	0.00
...............................................................................GAAATCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	2.00	0.00	2.00	0.00	0.00
...............................................................................GAAAGCTATACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACACAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCAAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................AAAAGCTCAACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACCCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATT.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
.....................................................................................................................................................................................................................................................................................................TGTGGC-----CTGC------TTG------G--TGG.........................	17	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTTATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAAATCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAGC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
......................................................................................................................................................................................T--T------------TCTT----------------------------------CCxxT-----ACTGTTTTT...................................................................................................	18	1	1.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCA..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTATACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTTTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTGCCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAACTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCGT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00	0.00
...............GTGAGTTTAGTGGAGTT-TAAT.............................................................................................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGATCTTCCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	1.00	0.00
................................................................................AAGGGTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACACAAACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00

dp4

CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTAACA-------ATCGCCGACAATC----A--AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAA-------------------------------------------TTGTTTTCCT-CC---------CCCACCAAA--AATCTCCCTCACCCTGT----------------------------------AAATC-----ACT-------------------------------------------ATGCGGCT---GCTGC------TGGTATTCGGCTTGGACTGTTCCAGATATCTTCTTCAATA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	26.00	0.00	6.00	20.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	25.00	1.00	8.00	16.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	9.00	1.00	8.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	4.00	0.00	0.00
...............GTGAGTTTAGTGGAGTT-TA...............................................................................................................................................................................................................................................................................................................................	19	1	3.00	3.00	0.00	0.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	3.00	0.00	1.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	2.00	0.00	0.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	2.00	0.00	0.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...........................................................................TCGCGAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	26	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAACTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
...........................................................................................CAAACTCATCCCTCCCAG-------------------------------------------TT........................................................................................................................................................................................................	20	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAGCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
...............GTGAGTTTTGTGGAGTT-T................................................................................................................................................................................................................................................................................................................................	18	1	1.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCAACC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATTTC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAGACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
................................................................................AAAGCGCGACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
................................................................................AAAGATCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAGACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00

droPer1

CCGAACCGTATCCGGGTGAGTTTTGTGGAGTT-TAAAGTTTACA-------ATCGCCGACAATC----A--AATTACGCGAAAGCTCTACCCAAACTCATCCCTCACAA-------------------------------------------TTGTTTTCCT-CC---------CCCACCAAA--AATCTCCCTCTCCCTGT----------------------------------AAATC-----ACT-------------------------------------------ATGCGGCT---GCTGC------TGGTATTCGGCTTGGACTGTTCCAGATATCTTCTTCAATA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...............................................................................GAAAGCTCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	73.00	1.00	1.00	29.00	42.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	40.00	0.00	2.00	17.00	17.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCATCT............................................................................................................................................................................................................................................................	23	1	12.00	0.00	1.00	4.00	7.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAT..............................................................................................................................................................................................................................................................	21	1	12.00	0.00	0.00	7.00	5.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	8.00	0.00	0.00	2.00	3.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCCT...........................................................................................................................................................................................................................................................	24	1	6.00	0.00	0.00	2.00	4.00	0.00
...............................................................................GAAAGCTCTACCCACACTCATC.............................................................................................................................................................................................................................................................	22	1	4.00	0.00	0.00	1.00	3.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCT..........................................................................................................................................................................................................................................................	25	1	3.00	0.00	0.00	0.00	0.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCATCA............................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	2.00	1.00	0.00
...............GTGAGTTTAGTGGAGTT-TA...............................................................................................................................................................................................................................................................................................................................	19	1	2.00	2.00	0.00	0.00	0.00	0.00
...............GTGAGTTTTGTGGAGTT-T................................................................................................................................................................................................................................................................................................................................	18	1	2.00	0.00	0.00	1.00	1.00	0.00
...............GTGAGTTTTGTGGAGTT-TAAAGT...........................................................................................................................................................................................................................................................................................................................	23	1	2.00	0.00	0.00	0.00	2.00	0.00
...............................................................................GAAAGATCTACCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	2.00	0.00	0.00	0.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACCT............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCA..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCGACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACCCT...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	0.00	1.00
................................................................................AAAGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCG...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
...............GTGAGTTTTGTGGAGTT-TAAAGTTT.........................................................................................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAACGCTCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............GTGAGTTTTGTGGAGTT-TAAA.............................................................................................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATT.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
.....................................................................................................................................................................................................................................................................................................TGCTGCT---GCTGC------TGGTAT..................................	18	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAGCT............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTATATCCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCACCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGATCTACCCAAACCCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCATCCCG..........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCACAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGGTCTACCCAAACTCAAC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GCAAGCTCTACTCAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCACACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCAAAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
..........................................................................................................................................................................................................................................................................................................CT---GCTGC------TGCTCTTCGGC.............................	18	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCACACTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCGAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAGACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCACTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCCAACTCATC.............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCAAAATCTTCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGATCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00	0.00
..............................................................................................................................................................................................................................................ATG-----ACT-------------------------------------------ATGCAGCT---GCTGC------T.......................................	20	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCCAACTCAC..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	1.00	0.00	0.00
...............................................................................GAACGCTCTACCCAACCTCAT..............................................................................................................................................................................................................................................................	21	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAGCTCTACCCTAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTGTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
...............................................................................GAAAACTATACCCAAACTCATCC............................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGATCTACCCAAACTCATCC............................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	1.00	0.00
................................................................................AAAGCTCTACCCAAACTCATCCC...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00	0.00

droWil1

CTGAACCATATCCAGGTGAGTTTTGTAGAGTTTTAAAGCTATAA-------ATCGCCGGTAAATAGACGTTAAAGACGCGAAAGCTCTACCCAAACTCAC-CCCGG-AAA------------------------------------------TTTTTTTATT-C-T-CTTTTTTCCCAACAAA--A------------ATAA----------------------------------TGACA-----ATTT-------A---TCTTGGAAAT--------------------TTGGTAA------ACACTTTAAATAA------T--TGTATATAT-TAGATATATTTTTCAATA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...............................................................................GAAAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	6992.00	2.00	60.00	282.00	6648.00
................................................................................AAAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	22	1	490.00	0.00	14.00	86.00	390.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCT..........................................................................................................................................................................................................................................................	24	1	438.00	0.00	1.00	2.00	435.00
...............................................................................GAAAGCTCTACCCAAACTCAC-C............................................................................................................................................................................................................................................................	22	1	438.00	2.00	2.00	23.00	411.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CT...........................................................................................................................................................................................................................................................	23	1	429.00	2.00	7.00	22.00	398.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCC..........................................................................................................................................................................................................................................................	24	1	405.00	1.00	6.00	18.00	380.00
................................................................................AAAGCTCTACCCAAACTCAC-CCT..........................................................................................................................................................................................................................................................	23	1	225.00	0.00	3.00	6.00	216.00
................................................................................AAAGCTCTACCCAAACTCAC-CCC..........................................................................................................................................................................................................................................................	23	1	191.00	0.00	4.00	40.00	147.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCA..........................................................................................................................................................................................................................................................	24	1	107.00	0.00	0.00	4.00	103.00
...............GTGAGTTTTGTAGAGTTTTAAAGC...........................................................................................................................................................................................................................................................................................................................	24	1	97.00	0.00	5.00	7.00	85.00
................................................................................AAAGCTCTACCCAAACTCAC-C............................................................................................................................................................................................................................................................	21	1	70.00	1.00	0.00	14.00	55.00
................................................................................AAAGCTCTACCCAAACTCAC-CT...........................................................................................................................................................................................................................................................	22	1	67.00	1.00	1.00	2.00	63.00
..............................................................................CGAAAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	24	1	55.00	0.00	1.00	5.00	49.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCCT.........................................................................................................................................................................................................................................................	25	1	25.00	0.00	0.00	0.00	25.00
...............GTGAGTTTTGTAGAGTTTTAAAGCT..........................................................................................................................................................................................................................................................................................................................	25	1	22.00	0.00	8.00	7.00	7.00
...............................................................................GAAAGCTCTACCAAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	20.00	0.00	0.00	0.00	20.00
.................................................................................AAGCTCTACCCAAACTCAC-CCT..........................................................................................................................................................................................................................................................	22	1	19.00	0.00	0.00	0.00	19.00
................................................................................AAAGCTCTACCCAAACTCAC-CCA..........................................................................................................................................................................................................................................................	23	1	19.00	0.00	1.00	1.00	17.00
..............................................................................CGAAAGCTCTACCCAAACTCAC-CT...........................................................................................................................................................................................................................................................	24	1	18.00	1.00	1.00	2.00	14.00
...............................................................................GAAAGCTCTACCGAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	13.00	0.00	0.00	0.00	13.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCG..........................................................................................................................................................................................................................................................	24	1	13.00	0.00	0.00	0.00	13.00
.................................................................................AAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	21	1	12.00	0.00	0.00	2.00	10.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CCTT.........................................................................................................................................................................................................................................................	25	1	12.00	0.00	0.00	0.00	12.00
...............................................................................GAAGGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	11.00	0.00	0.00	0.00	11.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CTT..........................................................................................................................................................................................................................................................	24	1	10.00	0.00	0.00	0.00	10.00
.......................................TATAA-------ATCGCCGGTAAATAGACGTT...........................................................................................................................................................................................................................................................................................	25	1	9.00	0.00	0.00	0.00	9.00
...............................................................................GAAATCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	8.00	0.00	0.00	0.00	8.00
................................................................................AAAGCTCTACCCAAACTCAC-CCG..........................................................................................................................................................................................................................................................	23	1	8.00	0.00	0.00	0.00	8.00
..............................................................................CGAAAGCTCTACCCAAACTCAC-C............................................................................................................................................................................................................................................................	23	1	8.00	0.00	0.00	0.00	8.00
...............................................................................AAAAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	7.00	0.00	1.00	1.00	5.00
...............................................................................GAAAGCTCTACACAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	7.00	0.00	0.00	1.00	6.00
................................................................................AAAGCTCTACCCAAACTCAC-CCCT.........................................................................................................................................................................................................................................................	24	1	7.00	0.00	0.00	0.00	7.00
.................................................................................AAGCTCTACCCAAACTCAC-CCC..........................................................................................................................................................................................................................................................	22	1	6.00	0.00	1.00	1.00	4.00
........................................................CGGTAAATAGACGTTAAAGACGC...................................................................................................................................................................................................................................................................................	23	1	5.00	0.00	1.00	4.00	0.00
................................................................................AAAGCTCTACCCAAACTCAC-CCTT.........................................................................................................................................................................................................................................................	24	1	5.00	0.00	0.00	0.00	5.00
...............................................................................GAAAGCTCTATCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	5.00	0.00	0.00	0.00	5.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CA...........................................................................................................................................................................................................................................................	23	1	5.00	0.00	0.00	2.00	3.00
.......................................................CCGGTAAATAGACGTTAAAGACGCG..................................................................................................................................................................................................................................................................................	25	1	5.00	0.00	3.00	1.00	1.00
...............................................................................GAAAGCTCTACCTAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	5.00	0.00	0.00	1.00	4.00
.................................................................................AAGCTCTACCCAAACTCAC-C............................................................................................................................................................................................................................................................	20	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCGC-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCAT-C............................................................................................................................................................................................................................................................	22	1	4.00	0.00	4.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC-AC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCAT-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	1.00	3.00
...............................................................................GAAAGCTCTACCCAAACTCAC-.............................................................................................................................................................................................................................................................	21	1	4.00	0.00	1.00	0.00	3.00
...............................................................................GAAAGCTCTGCCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTAACCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	3.00	1.00
..................................................................................AGCTCTACCCAAACTCAC-CCTT.........................................................................................................................................................................................................................................................	22	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GGAAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAGAGCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCAC-CG...........................................................................................................................................................................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACTCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	3.00	0.00	1.00	2.00	0.00
.................................................................................AAGCTCTACCCAAACTCAC-CCCT.........................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00
......................................................................................................................................................................................................................................................ATTT-------A---TxTTGAAAAT--------------------TTGGT..........................................................	19	2	1.50	1.50	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAA-CC...........................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00
...............................................................................GAAGGCTCTACCCAAACTCAC-CCC..........................................................................................................................................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
..................................................................................AGCTCTACCCAAACTCAC-CCT..........................................................................................................................................................................................................................................................	21	1	3.00	0.00	0.00	0.00	3.00
................................................................................AAAGCTCTACCCAAACTCAC-CTT..........................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00
...............GTGAGTTTTGTAGAGTTTTAAAG............................................................................................................................................................................................................................................................................................................................	23	1	3.00	0.00	1.00	1.00	1.00
...............................................................................GAAACCTCTACCCAAACTCAC-CC...........................................................................................................................................................................................................................................................	23	1	3.00	0.00	0.00	1.00	2.00

droVir3

CCGAGCCGTATCCGGGTGAGTTTCGTAGAGTT-TAAAGCTCTTA--CTTTGCTCGCTGGCAC----GC-----CCACGCGAAAGCTCTACCCAAACTCAC--TATGCAAACCCCCAACCCATACCCAAATCCA--------------------------------------------------------------------------------TGCTCCTTGtctctctctctctctctttctctc-----tctctct-------------ctctctctcCACTTTTGTTTCATGCTGCAC---TCGC------TGGCTCTTG---TTGAATGTT-CAGACATATTCTTTAATA	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...............................................................................GAAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	55.00	0.00	18.00	0.00	2.00	35.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TT..........................................................................................................................................................................................................................................................	23	1	16.00	0.00	8.00	0.00	1.00	7.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TA..........................................................................................................................................................................................................................................................	23	1	13.00	0.00	12.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TAT.........................................................................................................................................................................................................................................................	24	1	8.00	0.00	7.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAC--C...........................................................................................................................................................................................................................................................	22	1	4.00	0.00	0.00	0.00	0.00	4.00
...............................................................................GAAAGCTCTACCCAAACTCAC--............................................................................................................................................................................................................................................................	21	1	3.00	0.00	2.00	0.00	0.00	1.00
...................................................................................................................................................................................................................................CTCTCTCTCTCTCTCTCTC-----TCT....................................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
....................................................................................................................................................................................................................................TCGCTCTCTCTCTCTCTC-----TC.....................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
............................................................................................................................................................................................................................................TCTTTCTCTC-----TCTCTCT-------------GTTT...............................................................................	21	1	1.00	0.00	1.00	0.00	0.00	0.00
....................................................................................................................................................................................................................................................TC-----TGTTTCT-------------CTCTCTCTCC.........................................................................	19	2	0.50	0.00	0.00	0.00	0.00	0.50
.............................................................................................................................................................................................................................................CTCTCCCTC-----TCTCTCT-------------CTC................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
.............................................................................................................................................................................................................................CTCTCTCTCTCTCTCTCTCTCT...............................................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
...........................................................................................................................................................................................................................................CTCTCTCTCTC-----TCTCTCT-------------CTCT...............................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
..................................................................................................................................................................................................................................................TCTC-----CCTCTCT-------------CTCTGTCTC..........................................................................	20	4	0.25	0.00	0.00	0.25	0.00	0.00
......................................................................................................................................................................................................................................TCAGTCTCTTTCTCTC-----TC.....................................................................................................	18	3	0.33	0.00	0.00	0.00	0.00	0.33
..................................................................................................................................................................................................................................................TCGC-----TCTCTCT-------------CTCTCTCTC..........................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
.......................................................................................................................................................................................................................................CTCTCTCTCTCTCTC-----TCTCTCT-------------...................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
.................................................................................................................................................................................................................................CTCTCCCTCTCTCTCTCTC..............................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
...............................................................................GAAAGCTCTACCCAAACTCCC--TT..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00	0.00
...............................................................................GGAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCTC--TA..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00	0.00
.................................................................................................................................................................................................................................................CTCTC-----TCTCTCT-------------CTCTCTCTCT.........................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
...............................................................................GAAAGCTCTACCCAACCTCAC--TT..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00	0.00
................................................................................................................................................................................................................................TCGCTCTCTCTCTCTCTCTC..............................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
................................................................................................................................................................................................................................................TCTCCC-----TCTCTCT-------------CTGTCTC............................................................................	20	4	0.25	0.00	0.00	0.25	0.00	0.00
.................................................................................................................................................................................................................................................CTCTC-----CCTCTCT-------------CTCTCTC............................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
..............................................................................................................................................................................................................................TCGCTCTCTCTCTCTCTCTC................................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
...................................................................................................................................................................................................................................CTCTCCCTCTCTCTCTCTC-----.......................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
.............................................................................................................................................................................................................................................CTCTCTCTC-----TCTCTCT-------------CTCTCT.............................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
...............................................................................GAAAGCGCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................................................................................................................................................................CTCTCCCTCTCTCTCTCTC................................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
..............................................................................................................................................................................................................................................TCGCTCTC-----TCTCTCT-------------CTCTC..............................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
...............................................................................................................................................................................................................................................CTCTCCC-----TCTCTCT-------------CTCTC..............................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
................................................................................................................................................................................................................................TGTCTCTCTCTCTCTATCT...............................................................................................................	19	5	0.20	0.00	0.20	0.00	0.00	0.00
...........................................................................................................................................................................................................................................CTCTCCCTCTC-----TCTCTCT-------------C..................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
....................................................................................................................................................................................................................................TCTCCCTCTCTTGCTCTC-----T......................................................................................................	19	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCCACCCAAACTCAC--C...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00	0.00
...................................................................................................................................................................................................................................................AAC-----TCTCTCT-------------CTCTCTCTC..........................................................................	19	3	0.33	0.00	0.00	0.00	0.00	0.33
.........................................................................................................................................................................................................................................CTCTCCCTCTCTC-----TCTCTC.................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
............................................................................................................................................................................................................................TGTCTCTCTCTCTCTATCT...................................................................................................................	19	5	0.20	0.00	0.20	0.00	0.00	0.00
................................................................................................................................................................................................................................TCTCCCTCTCTCTCTGTCTC..............................................................................................................	20	4	0.25	0.00	0.00	0.25	0.00	0.00
......................................................................................................................................................................................................................................TCGCTCTCTCTCTCTC-----TCTC...................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
...............................................................................GAAAGCTCTATCCAAACTCGC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00	0.00
..................................................................................................................................................................................................................................TCGCTCTCTCTCTCTCTCTC-----.......................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
........................................................................................................................................................................................................................................TCGCTCTCTCTCTC-----TCTCTC.................................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
...............................................................................................................................................................................................................................CTCTCTCTCTCTCTCTCTCTCT.............................................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
..................................................................................................................................................................................................................................................TGTC-----TCTCTCT-------------CTCTATCT...........................................................................	19	5	0.20	0.00	0.20	0.00	0.00	0.00
.........................................................................................................................................................................................................................................CTCTCTCTCTCTC-----TCTCTCT-------------CT.................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
.....................................................................................................................................................................................................................................CTCTCCCTCTCTCTCTC-----TC.....................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
................................................................................................................................................................................................................................................TCGCTC-----TCTCTCT-------------CTCTCTC............................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCCT--............................................................................................................................................................................................................................................................	21	1	1.00	1.00	0.00	0.00	0.00	0.00
......................................................................................................................................................................................................................................TCACTCTTTTTCTCTC-----TC.....................................................................................................	18	4	0.25	0.00	0.25	0.00	0.00	0.00
.....................................................................................................................................................................................................................................CTCTCTCTCTCTCTCTC-----TCTCT..................................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
.................................................................................................................................................................................................................................................CTCTC-----TCTCTCT-------------CTCGCTCC...........................................................................	20	2	0.50	0.00	0.50	0.00	0.00	0.00
..............................................................................................................................................................................................................................................TGTCTCTC-----TCTCTCT-------------ATCT...............................................................................	19	5	0.20	0.00	0.20	0.00	0.00	0.00
................................................................................................................................................................................................................................................TGTCTC-----TCTCTCT-------------CTATCT.............................................................................	19	5	0.20	0.00	0.20	0.00	0.00	0.00
............................................................................................................................................................................................................................................TCGCTCTCTC-----TCTCTCT-------------CTC................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
..........................................................................................................................................................................................................................................TCTGTTTCTCTC-----TCTCTCC-------------...................................................................................	19	2	0.50	0.00	0.00	0.00	0.00	0.50
.......................................................................................................................................................................................................................................CTCTCCCTCTCTCTC-----TCTC...................................................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00
...............................................................................................................................................................................................................................................AACTCTC-----TCTCTCT-------------CTCTC..............................................................................	19	3	0.33	0.00	0.00	0.00	0.00	0.33
...............................................................................................................................................................................................................................................CTCTCTC-----TCTCTCT-------------CTCTCTCT...........................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
........................................................................................................................................................................................................................................TCACTCTTTTTCTC-----TCTC...................................................................................................	18	4	0.25	0.00	0.25	0.00	0.00	0.00
.................................................................................................................................................................................................................................................AACTC-----TCTCTCT-------------CTCTCTC............................................................................	19	3	0.33	0.00	0.00	0.00	0.00	0.33
..........................................................................................................................................................................................................................................TCGCTCTCTCTC-----TCTCTCT-------------C..................................................................................	20	11	0.09	0.00	0.09	0.00	0.00	0.00
.................................................................................................................................................................................................................................CTCTCTCTCTCTCTCTCTCTC-----T......................................................................................................	22	12	0.08	0.00	0.00	0.00	0.08	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TAA.........................................................................................................................................................................................................................................................	24	1	1.00	0.00	0.00	0.00	0.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TG..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00	0.00
..................................................................................................................................................................................................................................TCTCTCTCTCTCTTTGTGT.............................................................................................................	19	1	1.00	1.00	0.00	0.00	0.00	0.00
...................................................................................................................................................................................................................................................CTC-----TCTCTCT-------------CTCTCGCTCC.........................................................................	20	2	0.50	0.00	0.50	0.00	0.00	0.00
...................................................................................................................................................................................................................................................CTC-----TCCCTCT-------------CTCTCTCTC..........................................................................	19	11	0.09	0.00	0.00	0.00	0.09	0.00

droMoj3

CCGAGCCCTATCCCGGTGAGTTTCGTAGAGTT-TAAAGCTCACA--CTTTGCTCGCCAACAA----GC-----GCACGCGAAAGCTCTACCCAAACTCAC--TATGAAAATCTATACTCCAAACCCGAATCCAATCTTCGTGGATTCCATCATCGTGtctct-ct---------ctctctctc--tctctctc-----------------------------------------------------tctctctgtttgtctttctggatctctttctttctTTTGGTATTTCATGCTGCTC---TCGC------TGGCCTTG-A--TCAAATGTT-CAGACATCTTCTTCAACA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...............................................................................GAAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	44.00	2.00	23.00	19.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TAT.........................................................................................................................................................................................................................................................	24	1	8.00	1.00	5.00	2.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TA..........................................................................................................................................................................................................................................................	23	1	8.00	1.00	5.00	1.00	1.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TT..........................................................................................................................................................................................................................................................	23	1	4.00	0.00	1.00	3.00	0.00
...............GTGAGTTTAGTGGAGTT-TA...............................................................................................................................................................................................................................................................................................................................	19	1	3.00	3.00	0.00	0.00	0.00
................................................................................................................................................................CT-CT---------CTCTCTCTC--TCTCTCA..................................................................................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
................................................................................................................................................................................CTCTCTC--TCTCTCTC-----------------------------------------------------TCTCTGTGTGT.................................................................................................	26	3	0.33	0.33	0.00	0.00	0.00
..............................................................................................................................................................GTCT-CT---------CTCTCTCTC--TCTCT....................................................................................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
...............................................................................GTAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	1.00	0.00	0.00	0.00
..................................................................................................................................................................................CTCTC--TCTCTCTC-----------------------------------------------------TCTCTCTGTGTGT...............................................................................................	26	3	0.33	0.33	0.00	0.00	0.00
.............................................................................................................................................................TCTCT-CT---------CACTCTATC--TCTCT....................................................................................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
...................................................................................................................................................................CT---------CTCTCTCTC--TCTCTCTC-----------------------------------------------------A...........................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
................................................................................................................................................................................CTCTCTC--TCTCTCTC-----------------------------------------------------TCTCA.......................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
................................................................................................................................................................................GTCTCTC--TCTCTCTC-----------------------------------------------------TCTCT.......................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
............................................................................................................................................................CTCGCT-CT---------CTCTCTCTC--TCTCT....................................................................................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
..............................................................................CGAAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
................................................................................................................................................................................CTCGCTC--TCTCTCTC-----------------------------------------------------TCTCTCT.....................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
...............................................................................GAAAGCTCTACCCAAACTCGC--TAT.........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCACACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
..............................................................................................................................................................CTCG-CT---------CTCTCTCTC--TCTCTCT..................................................................................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
...............................................................................GAAAGCTCTACCCAAACTCA...............................................................................................................................................................................................................................................................	20	1	1.00	0.00	1.00	0.00	0.00
..........................................................................................................................................................................................CTCTCTC-----------------------------------------------------TCTCTCTCTTTGGC..............................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
..............................................................................................................................................................................GTCTCTCTC--TCTCTCTC-----------------------------------------------------TCT.........................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
...............................................................................GAAGGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	0.00	1.00	0.00
..........................................................................................................................................................GTCTCTCT-CT---------CTCTCTCTC--T........................................................................................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
....................................................................................................................................................................................CTC--TCTCTCTC-----------------------------------------------------TCTCTCTCA...................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
...............................................................................GAAAGCTCTACCTAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCAAACTCAC--TAAA........................................................................................................................................................................................................................................................	25	1	1.00	0.00	0.00	1.00	0.00
...............................................................................................................................................................................TCTCTCTC--ACTCTATC-----------------------------------------------------TCTCT.......................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
................................................................................................................................................................GT-CT---------CTCTCTCTC--TCTCTCT..................................................................................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
....................................................................................................................................................................T---------CTCTCTCAC--TCTATCTC-----------------------------------------------------TCT.........................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
..........................................................................................................................................................................................CTCTCTC-----------------------------------------------------TCTCTCTGCAT.................................................................................................	18	1	1.00	0.00	1.00	0.00	0.00
..............................................................................................................................................................CTCT-CT---------CTCTCTCTC--TCTCA....................................................................................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
.................................................................................................................................................................T-CT---------CTCTCACTC--TATCTCTC-----------------------------------------------------T...........................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
..................................................................................................................................................................................GTCTC--TCTCTCTC-----------------------------------------------------TCTCTCT.....................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
............................................................................................................................................................GTCTCT-CT---------CTCTCTCTC--TCT......................................................................................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
..................................................................................................................................................................................CTCGC--TCTCTCTC-----------------------------------------------------TCTCTCTCT...................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
...................................................................................................................................................................CT---------CGCTCTCTC--TCTCTCTC-----------------------------------------------------TCT.........................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
..............................................................................................................................................................................CTCTCTCTC--TCTCTCTC-----------------------------------------------------TCA.........................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
...............................................................................GGACGCTCTACCCAAACTCAC--TA..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGATCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GATAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	22	1	1.00	0.00	1.00	0.00	0.00
...............................................................................................................................................................TCT-CT---------CTCACTCTA--TCTCTCT..................................................................................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
.................................................................................................................................................................................TCTCTC--TCACTCTA-----------------------------------------------------TCTCTCT.....................................................................................................	21	6	0.17	0.00	0.00	0.00	0.17
..............................................................................................................................................................................CTCGCTCTC--TCTCTCTC-----------------------------------------------------TCTCT.......................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
...............................................................................GAAAGCTCTACCCAAACTCAC--TTT.........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
..............................................................................................................................................................................CTCTCTCTC--TCTCTCTC-----------------------------------------------------TCTGTGTGT...................................................................................................	26	3	0.33	0.33	0.00	0.00	0.00
................................................................................................................................................................CT-CG---------CTCTCTCTC--TCTCTCTC-----------------------------------------------------T...........................................................................................................	22	7	0.14	0.00	0.00	0.00	0.14
...............................................................................GAAAGTTCTACCCAAACTCAC--TAT.........................................................................................................................................................................................................................................................	24	1	1.00	0.00	1.00	0.00	0.00
...............................................................................GAAAGCTCTACCCACACTCAC--TA..........................................................................................................................................................................................................................................................	23	1	1.00	0.00	0.00	1.00	0.00
..................................................................................................................................................................................CTCTC--TCTCTCTC-----------------------------------------------------TCTCTCA.....................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13
................................................................................AAAGCTCTACCCAAACTCAC--T...........................................................................................................................................................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00
...................................................................................................................................................................GT---------CTCTCTCTC--TCTCTCTC-----------------------------------------------------T...........................................................................................................	20	8	0.13	0.13	0.00	0.00	0.00
............................................................................................................................................................CTCTCT-CT---------CTCTCTCTC--TCA......................................................................................................................................................................	20	8	0.13	0.00	0.00	0.00	0.13

droGri2

CGGAACCGTATCCGGGTGAGTTTCGTAGGGTT-TAAAGCAACAAAACTTTGCTCGCCGACAC----GC-----GTACGCGAAAGCTCTACCCAAACTCAC--TATGGAAACC-----------------------------------------CGTATCCCA-AC---------CCCCCAAAT--AATCC-----AACCAATATCCCAATCCTGGCCTGTTCGTTCTCGTGTTCTTTGCTTTTCTC-----TTCTGCTCTTTCTTG-------------------------CCTGCTGCGATTGCTGCTT------GTTTTG-C--TAAAATGTT-TAGACATATTCTTCAATA

Size

Hit Count

Total Norm

V109
Male body

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image