Possible Orthologs for dme-mir-1015

droSim1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:19998542-19998635 +	96.83	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTAAAAG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................TCCTGGGACATCTCTCTTGCAGT.............. 23 1 34.00 1.00 0.00 33.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAG............... 22 1 28.00 1.00 0.00 25.00 2.00 .........................................................TCCTGGGACATCTCTCTTGCAGTT............. 24 1 5.00 0.00 0.00 5.00 0.00 .........................................................TCCTGGGACATCTCTCTTGC................. 20 1 4.00 0.00 0.00 4.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCA................ 21 1 2.00 0.00 0.00 1.00 1.00 .........................................................TCCTGGGACATCTCTCTTGCAGG.............. 23 1 2.00 0.00 0.00 1.00 1.00 ...............GTGAGTGATGCTCCAGTTAGCT......................................................... 22 1 2.00 1.00 0.00 1.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAGTTT............ 25 1 1.00 0.00 0.00 1.00 0.00 ...........................................................CTGGGACATCTCTCTTGCAGTT............. 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAA............... 22 1 1.00 0.00 0.00 1.00 0.00 .....................................TGGCTGAGTGAGGATTTAAG..................................... 20 1 1.00 0.00 0.00 1.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAC............... 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................TCCTTGGACATCTCTCTTGCAG............... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTGGGACATCTCTCTTGCAGC.............. 23 1 1.00 0.00 0.00 1.00 0.00 ...............GTGAGTGATGCTCCCGTTAGCTTG....................................................... 24 1 1.00 1.00 0.00 0.00 0.00 .......................................................AGTCCTGGGACATCTCTCTTGC................. 22 1 1.00 1.00 0.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTGAAA............... 22 1 1.00 0.00 0.00 1.00 0.00
2	chr3L:20618618-20618708 -	42.52	TCATGGGCTACGACG-GTGAGTGATGCTCCAGTTAGCTTGGCTG----AGTGAGGATTTAAGTCCTGGGACATCTCT----CTTGCAGTCAAGA------TCCTGAAAG TCCTTGGCTAGTAGATGTCAGTA------------------CTAAAAATGTATTGTCTTCTACTCTTAGTCATCCCCTTTCTTTGGAGTGAAGCCCACTTTGCTGGATG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..............................................................................TTCTTTGGAGTCAAGCTC............. 18 1 3.00 0.00 2.00 1.00 0.00 .............................................................................CTTCTTTGGAGTGAAGCCC............. 19 1 1.00 0.00 1.00 0.00 0.00

droSec1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:20503496-20503589 +	93.71	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGTCTGAGTGAGACTTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTAAAAG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................TCCTGGGACATCTCTCTTGCAGT.............. 23 1 18.00 18.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAG............... 22 1 11.00 10.00 1.00 0.00 ...............GTGAGTGATGCTCCAGTTAGCT......................................................... 22 1 11.00 5.00 6.00 0.00 ...............GTGAGTGATGCTCCAGTTAGCTTG....................................................... 24 1 8.00 7.00 1.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAGA.............. 23 1 6.00 6.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCA................ 21 1 3.00 1.00 1.00 1.00 ...............GTGAGTGATGCTCCAGTTAGCTT........................................................ 23 1 3.00 3.00 0.00 0.00 .......................................................AGTCCTGGGACATCTCTCTTGC................. 22 1 2.00 0.00 2.00 0.00 ...............GTGAGTGATGCTCCAGTTAGC.......................................................... 21 1 2.00 2.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTACAGA.............. 23 1 1.00 1.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTACAGT.............. 23 1 1.00 1.00 0.00 0.00 .....................................................TAAGTxCTGGGACAACTCTCT.................... 20 1 1.00 0.00 0.00 1.00
2	super_11:1211342-1211401 -	27.75	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAA------GATCCTGAAAG TTATTGTCTTCTACTCTTAGTCATTCCCCTTCT----------------------------------------TTGGAGTGAAGCCCACTTTGCTGGATG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ......................ATTCCCCTTCT----------------------------------------TTGGAGT.................... 18 1 1.00 0.00 1.00 0.00

droYak2 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	chr3R:26340571-26340664 -	93.71	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGATAGCTTGACTGGGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...............GTGAGTGATGCTCCAGATAGCTTG....................................................... 24 1 7.00 0.00 1.00 6.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAGCTT........................................................ 23 1 6.00 0.00 1.00 5.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAGCT......................................................... 22 1 4.00 0.00 1.00 3.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAGCTTGT...................................................... 25 1 3.00 1.00 0.00 2.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAG........................................................... 20 1 1.00 0.00 0.00 1.00 0.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCAGT.............. 23 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................................................TCCTGGGACATCTCTCTTGCATT.............. 23 1 1.00 0.00 0.00 0.00 0.00 1.00 ......................................GACTGGGTGAGGATTTGC...................................... 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ...............GTGAGTGATGCTCCAGATAGCTTGTT..................................................... 26 1 1.00 0.00 0.00 1.00 0.00 0.00
1	chr3L:19251818-19251913 +	45.19	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACA--------T----CTCTCTTGCAGTCAAG------ATCCTGAAAG CGTTG-GCTAG--------TTGATGTCTGAA--------TCTGTACTATAACTTATTTCCTTACACTCGTAGTCATTCCCCTTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .............................................................................CCCCTTCTTTGGCGTCAAGC............... 20 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................................................................TTGGCGTCAAGCCCACTTTGCTGGAT. 26 2 0.50 0.00 0.00 0.50 0.00 0.00
2	chr3L_random:546095-546177 -	35.65	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACAT------------CTCTCTTGCAGTCAAG------ATCCTGAAAG AT---------GTCTGT---------------------GACTGTACTATAACTTATTTCCTTACACTCGTAGTCATTCCCCTTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .............................................................................CCCCTTCTTTGGCGTCAAGC............... 20 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................................................................TTGGCGTCAAGCCCACTTTGCTGGAT. 26 2 0.50 0.00 0.00 0.50 0.00 0.00

droEre2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_4820:7895693-7895786 -	92.67	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGATAGCTTGGCTGAGTGAGGACTTAAGTCCTGGGACATCTCTCTTGCAGTCAAAATCCTAAAAC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...............GTGAGTGATGCTCCAGATAGCT......................................................... 22 1 7.00 0.00 0.00 0.00 7.00 ...............GTGAGTGATGCTCCAGATAGCTT........................................................ 23 1 4.00 0.00 0.00 0.00 4.00 .........................................................TCCTGGGACATCTCTCTTGCAGT.............. 23 1 3.00 0.00 0.00 0.00 3.00 ...............GTGAGTGATGCTCCAGATAGCTTG....................................................... 24 1 2.00 0.00 0.00 0.00 2.00 .........................................................TCCTGGGACATCTCTCTTGCAG............... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTGGGACATCTCTCTTG.................. 19 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTGGGACATCCCTCTTGCAGT.............. 23 1 1.00 0.00 0.00 0.00 1.00 .....................................TGGCTGAGTGAGGACTTAAG..................................... 20 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTTGGACATCTCTCTTGCAG............... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTGGGACATCTCTCTTGCAGC.............. 23 1 1.00 0.00 0.00 0.00 1.00 .......................................................AGTCCTGGGACATCTCTCTTGC................. 22 1 1.00 0.00 0.00 0.00 1.00 ...............GTGAGTGATGCCCCAGATAGCT......................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ...............GTGAGTGATGCTCCAGATATCT......................................................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCCTGGGACATCTCTCTTGC................. 20 1 1.00 0.00 0.00 0.00 1.00
1	scaffold_4784:20942133-20942243 -	35.74	TCATGGGCTACGACGGTGAGTGATGC------TCCAGTTAGCTTGGCTGAGTGAGGATTTAA-------------GTCCTGGGACATC----TCTCTTGCAGTCAAG------ATCCTGAAAG -----GGGATCGGCTGTAAGTAAAATCCGTTGTCTAGTTGA--------TGTCAGTACTTAACGTATTTCCTTACACTCTTAGTCGTTCCCCTTCTTTGGTGTGAAGCCCACTTTGCTGGATG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................TGTCAAGTTGA--------TGTCGGT................................................................... 18 1 3.00 2.00 0.00 0.00 1.00

droFic1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000453912:1339925-1340020 +	77.25	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATT----TAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACCAAGGTGAGTGATGCTCCAGATAACTTGGAAAAGTGGGAATACGGATAAGTCC--GGACTTCTCTCTTGCAGTCAAGATTCTGAAAT Size Hit Count Total Norm
9	scf7180000453929:413125-413204 -	35.12	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTT----GCAGTCAA------GATCCTGAAAG TTAA---CTGAGACA-------AAATTATAGTTTGCT--------------TTTACACATTTAGTCATTTCCCTTCTTTGGCGTCAAACCCACTTTGCTGGATG Size Hit Count Total Norm

droEug1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scf7180000409798:215829-215922 -	85.38	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TAATGGGCTACAATGGTGAGTGATGCTCCAGATAGCTTCGCAAAGTAAGGATATAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTAAGAC Size Hit Count Total Norm
5	scf7180000406259:4138-4238 -	38.91	TCATGGGCTAC--------GACGGT-GAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG CGCCGGGGTTTCGCCCGGCGATTGTGCGGTCACGGCCCGATGAACCCTGTGGAGAAATTGTTTTGTCCCTGCCGCTGCCGCCCGGTTGTCTGG--CCGGGATG Size Hit Count Total Norm
1	scf7180000409711:4740380-4740492 +	37.91	TCATGGGCTACGACGGTGAGTG--ATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTA---------------AGTCCTGGGACATCTCT----CTTGCAGTCAAGAT------CCTGAAAG ----GGGCTCTGC-TGTAAGTAGAAAGTTTTAG----CTAAATCAAGGGCAAAATCATAATTAGTTTTTATATTTCTTTAGTCATTCCCCTTCTTTGGCGTGAAGCCCACTTTGCTGGATG Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302136:526695-526788 +	90.58	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGATGGCTGGGCTAAGTGAGGACTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAGC Size Hit Count Total Norm
4	scf7180000302193:4766798-4766871 +	29.76	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATC------CTGAAAG TAAACCAAAATTATAATTTGTCATGTTTT-----------------------TTCAGTCATT---CCCCTTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm

droTak1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scf7180000415769:2262017-2262110 -	87.46	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGCTGGCTTGGCAAAGCGTGGATCTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTCAAGC Size Hit Count Total Norm
2	scf7180000414337:308910-308941 +	18.48	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATC------CTGAAAG C--------------------------------------------------------------------TTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm

droEle1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000491008:477705-477804 +	75.44	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGA------TTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACGGTGAGTGATGCTCCAGAAAGCTTGGCCAAGTGACCACCCATACTTAAGCCCTGGGACATCTCTCTTGCAGTGAAGGTCCTGAAGC Size Hit Count Total Norm
6	scf7180000491193:2078736-2078766 +	17.39	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGA------TCCTGAAAG TTCT---------------------------------------------------------------------TTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm		None

droRho1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scf7180000779477:268222-268317 +	85.85	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATT--TAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGATACGACGGTGAGTGATGCTCCAGATAGCTTGGCTAAGTGAGGATTAATAAGCCCTGGGACATCTCTCTTGCAGTGAAGGTCCTGAAGC Size Hit Count Total Norm
4	scf7180000777887:32690-32774 +	38.8	TCATGGGCTACGACGGTGAGTGATGCTCCAGTT--AGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATC------CTGAAAG CTAATAACTAAAAC-------------CCAATTATAATTTATTTGCATTATT-TTTCAGTCTTT---CCCCTTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm

droKik1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000302387:55058-55154 +	77.25	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCT-GAGTGAGGATTT--AAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TGATGGGCTATGACGGTGAGTGATGCTCCAGATAGCTTAGTTTAAAAAAAGATTCAAAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAGC Size Hit Count Total Norm
2	scf7180000302260:48652-48750 +	41.6	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACA----TCTCTCTTGCAGTCAAGA------TCCTGAAAG TTGTTTGCTGCTAAGACAG----AGCTTTATCTAATTTTGTTGCCTTACATTTTTACCTGCAGTC-ATTCCCATTCTTTGGCGTCAAGCCCACTTTGCTGGATG Size Hit Count Total Norm

droAna3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13088:204245-204339 +	82.57	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAG-GATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGACAGTGAGTGATGCTCCAGATAGGTTGGCTTAGGAAGTCATTAAAGCCCTGGGATGTCTCTCTTGCAGTTAAGATCCTGAAAC Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ...............GTGAGTGATGCTCCAGATAGGT.......................................................... 22 1 2.00 1.00 1.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAGGTTGGCT..................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ...............GTGAGTGATGCTCCAGATAGGTTGGC...................................................... 26 1 1.00 1.00 0.00 0.00 0.00 ..........................................................CCCTGGGATGTCTCTCTTGCA................ 21 1 1.00 0.00 1.00 0.00 0.00
2	scaffold_13337:8431100-8431185 +	42.57	TCATGGGCTACGACGG----TGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTC----TTGC------AGTCAAGATCCTGAAAG CTATGAGCTAAGAGATTAGGTAACTTATATTCCTTT---------------------TAAATTCTAGT-CATTCCCCTTCTTTGGTGTGAAACCCACTCTGCTGGATG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo

droBip1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396413:258464-258558 +	78.49	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGA--TTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TCATGGGCTACGATAGTGAGTGATGCTCTAGATAGGTTAGCTGA-TGAAGTCTTTCAAGCCCTAGGTCATCTCTCTTGCAGTTAAAATCCTGAAAC Size Hit Count Total Norm
2	scf7180000396541:577523-577659 +	22.22	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGAC-----------------------------------------------ATCTCTCT----T------GCAGTCAAGATCCTGAAAG CCAGGAGCCACCCCCATGAA--------------ACCAGGCTCAGCTGTAAGTAAAATCCAGAATTTATTCTTGAAATGGAAAGTAATCTGTTGTTTTCTTCCAATTCTAGTCATTCCCCTTCTTTGGCGTGAAACCCACTCTGCTGGATG Size Hit Count Total Norm

dp4 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2:18646206-18646298 -	56.25	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAG--TGAGGATTT--AAGTCCTGGGACATCT----CTCTTGCAGTCAAGATCCTGAAAG TGATGGGCTACGATGGTAAG---------AGCTAGCCACACAAATTATTAGTATTTCTATTTCTCAAAATATTTCTTTCTTTTGCAGTCAAGATACTAAAGC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
2	chrXR_group6:12630975-12631063 -	39.11	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAG------------------------------TCAAGATCCTGAAAG TAATATAACAAAACAATAAA-----------------------------------ACCCTTAAGCAATCTTTATCCCATTCTTTCCATAGTCGTTCCCATTCTTTGGTGTCAAGCCCATTCTGC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body

droPer1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_3:1376406-1376498 -	57.22	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGT--GAGGATTT--AAGTCCTGGGACAT----CTCTCTTGCAGTCAAGATCCTGAAAG TGATGGGCTACGATGGTAAG---------AGCTAGCCACACAAATTATTAGTATTTCTATTTCTCAAAATATTCCTTTCTTTTGCAGTCAAGATCCTAAAGC Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo
2	super_33:652463-652557 -	40.67	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGT------------------------------CAAGA------TCCTGAAAG TAATATAACAAAACAATAAA-----------------------------------ACCCTTAAGCAATCTTTATCCCATTCTTTCCATAGTCGTTCCCATTCTTTGGTGTCAAGCCCATTCTGCTGGATG Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ............................................................................................................GTCAAGCCCATTCTGCTGGG.. 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ............................................................................................................GTCAAGCCCATTCTGCTGGA.. 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ......................................................................................ATAGTCGTTCCCATTCTTTG........................ 20 1 1.00 0.00 0.00 0.00 0.00 1.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_181108:4541725-4541808 -	47.55	TCATGGGCTACGACGGTGAGTGA--TGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TAATGGGTTATGACAGTAAGTTAGCTGGTAAAGTTGATTTCTT-----------TTAACTAATGT-GTATATTTACTGTAGTAAGAATTTTAAAGC Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ....................................................................ATATTTACTGTAGGAATA.......... 18 1 157.00 1.00 66.00 3.00 87.00 ...................................................................TATATTTACTGTAGGAATA.......... 19 1 149.00 7.00 39.00 1.00 102.00 ...................................................................TATATTTACTGTAGGAAT........... 18 1 39.00 0.00 5.00 0.00 34.00 ..................................................................ATATATTTACTGTAGGAA............ 18 1 6.00 0.00 2.00 0.00 4.00 ......................................................................ATTTACTGTAGTAGGACT........ 18 1 3.00 0.00 0.00 0.00 3.00 ....................................................................ATATTTACTGTAGGAACA.......... 18 1 2.00 0.00 1.00 0.00 1.00 ...................................................................TATATTTACTGTAGGAAAAA......... 20 1 1.00 0.00 1.00 0.00 0.00 ....................................................................ATATTTACTGTAGAAATA.......... 18 1 1.00 0.00 0.00 0.00 1.00 .....................................................................TATTTACTGTAGTAGGACT........ 19 1 1.00 0.00 0.00 0.00 1.00 .....................................................................TATTTACTGTAGGAAAAA......... 18 1 1.00 0.00 1.00 0.00 0.00 ....................................................................ATATTTACTGTAGTAATA.......... 18 1 1.00 0.00 1.00 0.00 0.00 .....................................................................TATTTACTGTAGGAGGAA......... 18 1 1.00 0.00 1.00 0.00 0.00 ...................................................................TATATTTACTGTAGTAATA.......... 19 1 1.00 0.00 0.00 0.00 1.00 ...................................................................TATATTTACTGTAGGAAA........... 18 1 1.00 0.00 1.00 0.00 0.00 ..................................................................GAATATTTACTGTAGGAA............ 18 1 1.00 0.00 1.00 0.00 0.00 .....................................................................TATTTACTGTAGTAGGAAT........ 19 1 1.00 0.00 0.00 0.00 1.00

droVir3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13047:3497490-3497590 +	43.86	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTT--------------GCAGTCAAGATCCTGAAAG TTGTGGGCTACGAAAGTAAGTATT-TACTTGATAACTC------GTTAAACCTAAAGTCTGTTAACCACTCTTATAACTATGCATCTAAACAGTTAAGGTACTAAAGA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head
3	scaffold_13049:20513518-20513623 -	38.61	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGT--------------------CCTG-GGACATCTCT----CTTGCAGTCAAGATCCTGAAAG T-----------ACGAAAGATGATATT--ATTTAACTTGCCTCAATGTGCATTAT-ATAATTCAATGTCTCTGCTTGTCTTGCAGACGTTTCCCTTCTTTGGCGTCAAGCCTTTGCTGC Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ..................................................ATTAT-TTAATACAATGTC.................................................. 18 1 4.00 2.00 0.00 1.00 1.00 0.00 .................................................CATTAT-TTAATACAATGTC.................................................. 19 1 3.00 0.00 1.00 2.00 0.00 0.00 ..................................................................GTCTCTGCTTGTCTCACAG.................................. 19 1 1.00 0.00 0.00 1.00 0.00 0.00

droMoj3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_6540:20508341-20508431 +	53.03	TCATGGGCTACGACGGTGAGT---GATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TAATGGGCTACGATGGTAAATGCTGATGTTCATGAATATTTATCCAAGTAATTT------CTTTACGTTGTCTTCTTAACAGTTAAGGTTTTGAAAA Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo
4	scaffold_6680:8220196-8220287 -	45.71	TCATGGGCTACGACGGTGAGTGATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGA-------------------------TCCTGAAAG TCATTAGATGTG---------------------------AATGAATAGGCCATTTTGTAATACGTTTTCATTTTCGCAGTCTTTTCCGTTCTTTGGCGTCAAGCCGACTCTGCTGGATG Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ..............................................................................GTCTTTTCCGTTCTTTGGCGTCA.................. 23 1 1.00 1.00 0.00 0.00 0.00 ......GATGTG---------------------------AATGAGTAGTCC.................................................................... 18 2 0.50 0.00 0.00 0.00 0.50

droGri2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_14906:156637-156731 +	49.86	TCATGGGCTACGACGGTGAGT------------GATGCTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACATCTCTCTTGCAGTCAAGATCCTGAAAG TGGTGGGCTATGATAGTGAGTTGATTCTATTGTAATAATCAAATCGTTTTTGTTATTTTA-----------TAAACATGCCATTTTAACAGTCAAGATACTCAAGA Size Hit Count Total Norm V109 Male body
4	scaffold_15110:11993738-11993829 +	41.75	TCATGGGCTACGACGGTGAGTGATG-CTCCAGTTAGCTTGGCTGAGTGAGGATTTAAGTCCTGGGACA--------TCTCTCTTGCAGTCAAGATCCTGAAAG ATGTCGCATACGTCATTTAGCGATTGATTTAAATAATTCAT-----------CTTAATTTCTCTGACAGTCGTTTCCGTTCTTTGGCGTCAAGGCCACGCTGC Size Hit Count Total Norm V109 Male body

Generated: 04/20/2012 at 05:22:32 EDT