Possible Orthologs for dme-mir-1003

droSim1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr3R:20323145-20323230 + 96.54
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.................................................TCTCACATTTACATATTCACAG...............2212407.0042.001186.0089.001090.00
.................................................TCTCACATTTACATATTCACA................211183.0037.00108.003.0035.00
.................................................TCTCACATTTACATATTCACAC...............22148.000.0020.004.0024.00
...............GTGGGTATCTGGATGTGGTTGG.................................................22144.0028.003.003.0010.00
.................................................TCTCACATTTACATATTCACAGT..............23139.005.0017.005.0012.00
.................................................TCTCACATTTACATATTCAC.................20134.000.0030.001.003.00
.................................................TCTCACATTTACATATTCACAGA..............23128.000.0016.004.008.00
.................................................TCTCACATTTACATATTCA..................1919.000.009.000.000.00
.................................................TCTCACATTTACATATTCACAGG..............2319.000.003.002.004.00
..................................................CTCACATTTACATATTCACAG...............2118.001.005.002.000.00
...............GTGGGTATCTGGATGTGGTTG..................................................2117.007.000.000.000.00
..................................................CTCACATTTACATATTCACAGT..............2215.003.001.000.001.00
.................................................TCTCACATTTACATATTCACAGTA.............2415.000.001.000.004.00
.................................................TCTCACATTTACATATTCACAGC..............2314.000.003.000.001.00
.................................................TCTCGCATTTACATATTCACAG...............2214.000.002.000.002.00
.................................................CCTCACATTTACATATTCACAG...............2214.000.002.000.002.00
.................................................TCTCACATTTACATATTCACGG...............2213.000.001.000.002.00
.................................................TCTCACATTTACATATTCACAA...............2213.000.001.001.001.00
..................................................CTCACATTTACATATTCACAGA..............2213.001.001.001.000.00
.................................................TCCCACATTTACATATTCACAG...............2213.000.001.000.002.00
.................................................TCTCACGTTTACATATTCACAG...............2212.001.001.000.000.00
.................................................TCTCACATTTACATATTCACG................2112.000.001.000.001.00
.................................................TCTCACATTTACATATTCACAGAA.............2412.000.001.001.000.00
....................................GCTCTGGCGGTCCTCTCAC...............................1912.000.002.000.000.00
.................................................TCTCACATTTACATATTAACAG...............2212.000.001.000.001.00
.................................................TCTCACATTCACATATTCACAG...............2212.000.002.000.000.00
.................................................TCTCACATTTACATATTCGCAG...............2211.000.000.000.001.00
.................................................TCTCACATTTACATATTC...................1811.000.001.000.000.00
...............GTGGGTATCTGGATGTTGTTGG.................................................2211.000.001.000.000.00
...............GTGGGTATCTGGATGTGGTTGGC................................................2311.000.001.000.000.00
.................................................CCTCACATTTATATATTCACAG...............2211.000.000.000.001.00
.................................................TCTCACATTTATATATTCACA................2111.000.001.000.000.00
.................................................TTTCACATTTACATATTCACAGA..............2311.001.000.000.000.00
.................................................TCTCACATTTTCATATTCACAG...............2211.000.001.000.000.00
.................................................TCTCACATTTACATATTCAGAG...............2211.000.000.000.001.00
.....................ATCTGGATGTGGTTGACC...............................................1811.000.001.000.000.00
.................................................TCTCACATTTAAATATTCACAG...............2211.000.000.000.001.00
.................................................ACTCACATTTACATATTCACAG...............2211.000.001.000.000.00
.................................................CCTCACATTTACATACTCACAG...............2211.000.000.000.001.00
.................................................TCTCACATTTATATATTCACAG...............2211.000.001.000.000.00
.................................................TCTCACAxTTACATATTCACAG...............2111.000.001.000.000.00
...............GTGGGTGTCTGGATGTGGTTG..................................................2111.001.000.000.000.00
.................................................TATCACATTTACATATTCACA................2111.001.000.000.000.00
.................................................TCTCACATCTACATATTCACAG...............2211.000.001.000.000.00
.................................................TCTCACATTTACATACTCACAG...............2211.000.000.000.001.00
.................................................TCTCACATTTACATGTTCACAG...............2211.000.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGCTCTG............................................2711.000.000.001.000.00
.................................................TCTCACATTTCCATATTCACA................2111.001.000.000.000.00
.....................................................ACATTTACATATTCACAG...............1811.001.000.000.000.00
.................................................TCTCACATTTAAATATTCGCAG...............2211.000.001.000.000.00
.................................................TCTCACATTTACACATTCACAG...............2211.000.000.000.001.00
.................................................TCTCACGTTTACATATTCACA................2111.000.000.000.001.00
.................................................TCTCACATTTACATATTTACA................2111.001.000.000.000.00
.................................................TCTCACATTTACATATTCATAG...............2211.000.001.000.000.00
.................................................TCTCACATTTACATATTGACAG...............2211.000.000.000.001.00
...............GTGGGGATCTGGATGTGGTTGG.................................................2211.001.000.000.000.00
.................................................TCGCACATTTACATATTCACA................2111.001.000.000.000.00
.................................................TCTCACATTTACATATCCACAGT..............2311.001.000.000.000.00
....................................GCTCTGGCGGTCCTCTCACATTT...........................2311.000.001.000.000.00
.................................................TCTCACATTTACATATTCAG.................2011.000.000.000.001.00
.................................................TCTCACATTTACCTATTCACA................2111.000.001.000.000.00
...................................................TCACATTTACATATTCACAG...............2011.001.000.000.000.00
.................................................TCTCGCATTTACATATTCACAGT..............2311.000.001.000.000.00
.................................................TCTCACATTTACATATTCACAT...............2211.001.000.000.000.00
.................................................TCTCACAxTTACATATTCACAGT..............2211.000.001.000.000.00
.................................................TCTCACAGTTACATTTTCACA................2111.001.000.000.000.00
...............GTGGGTATCTGGATGTGGTTGGTA...............................................2411.001.000.000.000.00
.................................................TCCCACATTTACATATTCACA................2111.001.000.000.000.00
...............GTCGGTATCTGGATGTGGTTGG.................................................2211.000.001.000.000.00


droSec1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 super_0:20818704-20818789 + 96.54
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............GTGGGTATCTGGATGTGGTTGG.................................................221219.0045.00133.0041.00
.................................................TCTCACATTTACATATTCACA................211109.0012.0024.0073.00
.................................................TCTCACATTTACATATTCACAG...............221102.005.0051.0046.00
.................................................TCTCACATTTACATATTCACAGT..............23172.0013.0039.0020.00
...............GTGGGTATCTGGATGTGGTTG..................................................21156.0020.0023.0013.00
.................................................TCTCACATTTACATATTCA..................19114.000.000.0014.00
..................................................CTCACATTTACATATTCACAGT..............22111.003.005.003.00
.................................................TCTCACATTTACATATTCAC.................2017.000.000.007.00
...............GTGGGTATCTGGATGTGGTTGGT................................................2316.002.004.000.00
...............GTGGGTATCTGGATGTGGTTGGC................................................2315.002.001.002.00
...............GTGGGTATCTGGATGTGGTTGGA................................................2315.004.000.001.00
.................................................TCTCACATTTACATATTCACAGA..............2315.000.000.005.00
...............GTGGGTATCTGGATGTGGTT...................................................2013.001.001.001.00
...............GTGGGTATCTGGATGTGG.....................................................1813.000.001.002.00
...............GTGGGTATCTGGATGTGGTTGT.................................................2213.002.001.000.00
.................................................TCTCACATTTACATATTCACAGCA.............2412.000.000.002.00
...............GTGGGTATCTGGATGTGGTTGA.................................................2212.001.000.001.00
...............TTGGGTATCTGGATGTGGTTGG.................................................2212.000.001.001.00
...................................................TCTCATTTACATATTCACAG...............2011.000.001.000.00
.................................................TCTCACATTTACATATTCACG................2111.000.001.000.00
...............GTGGATATCTGGATGTGGTTGG.................................................2211.000.001.000.00
...............GTGGGTATCTGGATGTGGTAGG.................................................2211.000.001.000.00
...............GTGGGTATCTAGATGTGGTTGG.................................................2211.000.001.000.00
................GTGGTATCTGGATGTGGTTG..................................................2011.000.000.001.00
.................................................TCTCACATTTTCATATTCACAG...............2211.000.001.000.00
...................................................TCTCATTTACATATTCACA................1911.000.000.001.00
...............GTGGGTATCTGGATGTGGCTGG.................................................2211.000.001.000.00
.................................................TCTCACATTTACATATACACA................2111.000.000.001.00
.....................ATCTGGATGTGGTTGACC...............................................1811.000.000.001.00
...............GTGGGTATCTGGATGTTG.....................................................1820.500.000.000.50
.................................................ACTCACATTTACATATTCACAG...............2211.000.000.001.00
.................................................TCTCACAxTTACATATTCACAG...............2111.000.001.000.00
.................................................TCTCACATTTACACATTCACA................2111.000.001.000.00
.................................................TCTCACATTTACATATTCACAGTT.............2411.000.000.001.00
..................................................CTCACATTTACATATTCACA................2011.000.000.001.00
...................................................TCACATTTACATATTCACAGT..............2111.000.001.000.00
................TGGGTATCTGGATGTGGTTGG.................................................2111.000.000.001.00
..................................................CTCACATTTACATATTCACAGA..............2211.001.000.000.00
.................................................TCTCACATTCACATATTCACAGT..............2311.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGCA................................................2311.001.000.000.00
.................................................TCTCACATTTACGTATTCACAGT..............2311.001.000.000.00
...............GTGGGTATCTGGATGTGGCTG..................................................2111.001.000.000.00
...............GTGGGTATCTGGATGTGGTTGGAT...............................................2411.000.001.000.00
...................................................TCACATTTACATATTCACA................1911.000.000.001.00
...............GTGGGGATCTGGATGTGGTTG..................................................2111.001.000.000.00
..................................................CTCACATTTACATATTCACAG...............2111.000.001.000.00
.................................................TCTCACATTTACATATTCAGT................2111.000.001.000.00
.................................................TCTCACAATTACATATTCACAG...............2211.000.000.001.00
....................AATCTGGATGTGGTTGAC................................................1811.000.001.000.00
..................................................CTCACATTTACATATTCACAGTT.............2311.000.000.001.00
.................GGGTATCTGGATGTGGTTGG.................................................2011.000.000.001.00
...............GTGGGTATCTGGATGTGCTTGG.................................................2211.000.001.000.00
.................................................TCTCACATTTACATATTCACATT..............2311.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGTA...............................................2411.000.000.001.00
...............GTGGGTATCTGGATGTGGT....................................................1911.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGCT...............................................2411.001.000.000.00
8 super_5454:775-849 + 39.45
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CCAGCAGCAGCAACAG------CGTCGACGCGGTCGCCACCAGTGGCG-----GCAACAGCAGCGGCGCAGCCACCACCAGCAGAG
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................AGCAGCGACGCAGGCACCACC.......2121.500.500.001.00
......................................................CTTCAGCAGCGGCGCAGC..............1812.000.001.001.00
........................................................ATAGCAGCGACGCAGCCACCA.........2111.000.000.001.00
.........................................................CAGCAGCGACGCAGCCACCACC.......2220.500.000.000.50
.....AGGAGCAAAAG------CGTCGAC.........................................................1811.000.001.000.00
...GCAGCAGCAACAG------CGGAGACGCG......................................................2311.000.000.001.00
......GCAGCAGCAG------CGTCGGCG........................................................18380.030.000.030.00
...GCAGCAGCAGCxG------CGTCGA..........................................................1860.170.000.170.00
.........................................................CGGCAGCGACGCAGCCACCAC........2111.001.000.000.00
..........................................................AGCAGCGACGCAGCCACCACC.......2120.500.000.000.50
.......................................................AATAGCAGCGACGCAGCCACC..........2111.000.000.001.00
......................................................CAATAGCAGCGACGCAGCCAC...........2111.001.000.000.00
............................................................CAGCGACGCAGCCACCACCA......2020.500.000.000.50


droYak2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 chr3R:26013202-26013287 - 95.4
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGTCGTGAGCTGCG
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.................................................TCTCACATTTACATATTCACAG...............221506.0027.006.002.0011.00460.00
.................................................TCTCACATTTACATATTCACA................211124.0034.0018.004.0019.0049.00
.................................................TCTCACATTTACATATTCACAGT..............23142.0011.004.009.0012.006.00
...............GTGGGTATCTGGATGTGGTTGG.................................................22127.0017.001.004.005.000.00
...............GTGGGTATCTGGATGTGGTTG..................................................21121.0014.000.002.004.001.00
.................................................TCTCACATTTACATATTCAC.................20113.000.000.000.001.0012.00
..................................................CTCACATTTACATATTCACAGT..............22110.004.002.001.002.001.00
.................................................TCTCACATTTACATATTCACAC...............2216.000.000.000.000.006.00
.................................................TCTCACATTTACATATTCA..................1913.001.000.000.001.001.00
.................................................TCTCACATTTACATATTCACCG...............2212.001.000.000.000.001.00
.................................................TCTCACATTTACATCTTCACAG...............2212.000.000.000.002.000.00
...................................................TCACATTTACATATTCACAGT..............2112.001.000.000.001.000.00
.................................................TCTCACATTTACATATTCACAGA..............2312.000.000.000.001.001.00
.................................................TCTCACATTTACATATTCACC................2112.001.000.000.001.000.00
...............GTGGGTATCTGGGTGTGGTTGG.................................................2211.001.000.000.000.000.00
.................................................TCTCACATTTACATATTCACAGC..............2311.000.000.000.000.001.00
.................................................TCTCACATTTACATAGTCACA................2111.000.000.000.001.000.00
.................................................TCTCACATTTACATATTCACCGT..............2311.001.000.000.000.000.00
.................................................TCTCCCATTGACATATTCACAG...............2211.000.000.000.001.000.00
.................................................TCTCACATGTACATATTCACA................2111.000.000.000.001.000.00
.................................................TCTCAAATTTACATATTCACAGT..............2311.000.000.000.001.000.00
.................................................TCGCACATTTACATATTCACA................2111.000.000.000.001.000.00
.................................................TCTCACATTTGCATATTCA..................1911.000.000.000.001.000.00
...................................................TCACATTTACATATTCACA................1911.000.000.000.001.000.00
..................................................CTCACATTTACATATTCACAG...............2111.000.000.000.000.001.00
....................................GCTCTGGCGGTCCTCTCACATTT...........................2311.000.000.000.000.001.00
.................................................TCTCACATTTAAATATTCACAG...............2211.000.000.000.000.001.00
.................................................TCTCACATTTACTTATTCACAG...............2211.000.000.000.000.001.00
...............GTGGGTATCTGGCTGGGGTTGGC................................................2311.000.000.000.001.000.00
.................................................TCTCACATTTACATATTCCCAC...............2211.000.000.000.000.001.00
.................................................TCTCACATTTACATATTCCCA................2111.000.000.000.001.000.00
..................................................CTCACATTTCCATATTCACAGT..............2211.000.000.000.001.000.00
.................................................TCTCACATTTACATACTCACAG...............2211.001.000.000.000.000.00
...............GTGGGTATCTGGATGTGGTTTG.................................................2211.001.000.000.000.000.00
.................................................TCTCACATTTACATGTTCACAG...............2211.000.000.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGT................................................2311.000.000.001.000.000.00
.................................................TAACACATTTACATATTCACA................2111.000.000.000.001.000.00
.................................................TCTCACATTTACATATTAACAG...............2211.000.000.000.000.001.00
.................................................TCTCACATTTACATCTTCACA................2111.000.000.000.001.000.00
..................................................CTCACATTTACATATTCCCA................2011.000.000.000.001.000.00
.................................................TCTCACCTTTACATATTCACAG...............2211.000.000.000.001.000.00
.................................................TCTAACATTTACATATTCACA................2111.000.000.000.001.000.00
.................................................TCTCACATTTACATATTCCCAG...............2211.000.000.000.000.001.00
................................................CTCTCACATTTACATATTCACAG...............2311.001.000.000.000.000.00


droEre2 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scaffold_4820:7574099-7574184 - 95.4
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAACTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.................................................TCTCACATTTACATATTCACA................211297.0025.0020.000.00252.00
.................................................TCTCACATTTACATATTCACAG...............221246.0023.0025.000.00198.00
...............GTGGGTATCTGGATGTGGTTGG.................................................221138.0020.006.000.00112.00
.................................................TCTCACATTTACATATTCACAGT..............23169.002.009.000.0058.00
...............GTGGGTATCTGGATGTGGTTG..................................................21126.003.002.000.0021.00
.................................................TCTCACATTTACATATTCA..................19117.000.000.000.0017.00
.................................................TCTCACATTTACATATTCAC.................20115.000.001.000.0014.00
..................................................CTCACATTTACATATTCACAGT..............22113.000.001.000.0012.00
...............GTGGGTATCTGGATGTGGTTTG.................................................2216.003.002.000.001.00
.................................................TCTCACATTTACATATTCACAGA..............2316.001.000.000.005.00
.................................................TATCACATTTACATATTCACAG...............2214.000.000.000.004.00
.................................................CCTCACATTTACATATTCACA................2114.001.002.000.001.00
..................................................CTCACATTTACATATTCACAG...............2113.000.001.000.002.00
.................................................TCTCACATTTACATATTAACAG...............2213.000.000.000.003.00
...............GTGGGTATCTGGATGTGGTTT..................................................2113.002.001.000.000.00
.................................................TCTCACATTTACATATTCACAGC..............2312.000.000.000.002.00
...............GTGGGTATCTGGATGTTGTTGG.................................................2212.001.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGC................................................2312.000.000.000.002.00
...............GTTGGTATCTGGATGTGGTTGG.................................................2212.000.000.000.002.00
.................................................TCTCACATTTATATATTCACAG...............2212.000.000.000.002.00
.................................................TATCACATTTACATATTCACA................2112.000.000.000.002.00
................TGGGTATCTGGATGTGGTTGG.................................................2112.000.000.000.002.00
.................................................TCTCACATTTAAATATTCACA................2112.000.000.000.002.00
...................................................TCACATTTACATATTCACAG...............2012.000.000.000.002.00
.................................................TCTCACATTTACATATTCACAT...............2212.000.000.000.002.00
...............GTGGGTATCTGGATGTGGTTGGT................................................2312.000.000.000.002.00
.................................................TCTCACACTTACATATTCACAG...............2211.001.000.000.000.00
...............GTGGGTATCTGAATGTGGTTGG.................................................2211.000.000.000.001.00
...................................................TCTCACTTACATATTCACA................1911.000.000.000.001.00
...............TTGGGTATCTGGATTTGGTTGG.................................................2211.001.000.000.000.00
.................................................TCTCACATTTACATATTAACAGT..............2311.000.000.000.001.00
.................................................TCTCAAATTTACATATTCACA................2111.000.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGCTC..............................................2511.000.000.000.001.00
...............GTGGGTATCTGGATGTGGCTGG.................................................2211.000.000.000.001.00
.................................................TCTCACATTTAAATATTCACAG...............2211.000.000.000.001.00
.................................................TCTCACATTTACAGATTCACA................2111.000.001.000.000.00
.................................................TCTCACATTTACATATTCACAA...............2211.000.000.000.001.00
.................................................TGGCACATTTACATATTCACA................2111.001.000.000.000.00
..................................................CTCACATTTACATATTCAAAGT..............2211.001.000.000.000.00
.................................................TCTCACATCCACATATTCACA................2111.001.000.000.000.00
...............GTGGGTATCTGGATGTGGTTGGCTCT.............................................2611.000.000.000.001.00
.................................................TCTAACATTTACATATTCACAGT..............2311.000.000.000.001.00
...............GTGGGTATCTCGATGTGGTTGG.................................................2211.000.000.000.001.00
...............GTGGGCATCTGGATGTGGTTG..................................................2111.001.000.000.000.00
.................................................TCTCACATTTACATATTCACAGTT.............2411.000.000.000.001.00
.................................................TCTCACATTTACATGTTCACAG...............2211.001.000.000.000.00
...............GGGGGTATCTGGCTGTGGTTGG.................................................2211.001.000.000.000.00
.................................................TCTTACATTTACATATTCAC.................2011.000.000.000.001.00
...............GTGGGTATCTGGATGTGGTT...................................................2011.000.000.000.001.00
.................................................TCTCACATATACATATACACA................2111.001.000.000.000.00
.................................................TCTCACATTTACATATTCACCG...............2211.001.000.000.000.00
.................................................TCTCACATTTTCATATTCACAT...............2211.000.000.000.001.00
.................................................TCTAACATTTACATATTCACAG...............2211.000.000.000.001.00
...............ATGGGTATCTGGATGTGGTTGG.................................................2211.000.000.000.001.00
.................................................TCTCACATTTACCTATTCACAG...............2211.000.000.000.001.00
.................................................TATCACATTTACATATTCACAGC..............2311.000.000.000.001.00
.................................................TCTCACATTTACATATTCAA.................2011.000.000.000.001.00
...................................................TCACATTTACATATTCACA................1911.000.000.000.001.00
....................................................CACATTTACATATTCACAGT..............2011.000.000.000.001.00
.................................................TCTCATATTTACATATTCACAG...............2211.000.001.000.000.00
...............GTGGGTATCTTGATGTGG.....................................................1811.000.000.000.001.00
.................................................TCTCACATTTACACATTCACAGT..............2311.000.000.000.001.00
...............GTGGGTATCTTGATGTGGTTGT.................................................2211.000.001.000.000.00
.................................................TCTCACATTTACCTATTCACA................2111.000.000.000.001.00
...............GTGGGTATCTGGATATGGTTG..................................................2111.000.000.000.001.00
...............GTGGGTATCTGTATGTGGTTGG.................................................2211.000.000.000.001.00
....................................................CACATTTACATATTCACAG...............1911.001.000.000.000.00
...............GTGGGTATCTGCATGTGGTTGG.................................................2211.001.000.000.000.00
.................................................TATCACATTTACATATTCACAGT..............2311.000.000.000.001.00
...............GTGGTTATCTGGATGTGGTTGG.................................................2211.001.000.000.000.00
.................................................TCTTACATTTACATATTCACAG...............2211.000.000.000.001.00
...............GTGGGTATCTGGATGTGGTTGGTA...............................................2411.000.000.000.001.00
....................................................CACATTCACATATTCACA................1811.000.000.000.001.00
.................................................TCCCACATTTACATATTCACA................2111.000.000.000.001.00
...............GTGGGTATCTGGATGTGGT....................................................1911.000.000.000.001.00
...............GTGGGTATCTTGATGTGGTTGG.................................................2211.000.000.000.001.00
.................................................TCTCACATTTACATATTCACC................2111.001.000.000.000.00
.................................................TCTCACATTTAAATATTCACAGA..............2311.000.000.000.001.00
.................................................TCTCACATTTACATATTCACGC...............2211.000.000.000.001.00
2 scaffold_4690:14275664-14275682 + 13.57
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CG------------------------------------------------------------------CAGCTGCCG-GTGCCGTC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
None


droFic1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000454106:1827848-1827933 - 87.45
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGAAGGTGAGTATCTGGATGTGACTGGCTCTTGCGGTCCTCTCACATCTAGTTATTCTCAGGCGCCGTGAGCTGCG
SizeHit CountTotal Norm
3 scf7180000454073:3083426-3083524 - 42.84
CAA--GCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTG----GCGGTCCTCTCACATTTACATATTCACAGGC-------------GCCGTGAGCTGCG
CATCAACT----ACAAGGTGAGTGTGTGGGTGTGTGTGCCTCTCTCTGTCTGCCTTCTCCCTATCTCTTTCTGTC--GCGGCCAAATCGGTGTGCGTGTGCGGCG
SizeHit CountTotal Norm


droEug1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000409881:208840-208925 + 87.45
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGGAGGTGGGTATCTTGATGTGGTTGGCTCCGGCTGTCCTCTCACATCTGTATATTCACAGGCGTCGTGAGCTGCG
SizeHit CountTotal Norm


droBia1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302402:4263781-4263866 + 90.86
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGAAGGTGGGTATTTTGATGTGGTTGGCTCTGGCGGTCCTCTCACATCTATATATTCACAGGCGTCGTGAGCTGCG
SizeHit CountTotal Norm


droTak1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000415310:656326-656411 - 93.13
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGGAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATCTACATATTCACAGGCGTCGTGAGCTGCG
SizeHit CountTotal Norm
2 scf7180000415872:908431-908523 + 47.59
CAAGCTGCGCAG--AAGGTGGGTATCTGGATGTGGT--TGGCTCTGGCGGTCCTCT-CACATTTACATATTCACAGGCGCCG--TGAGCTGCG
TAATCAGCGACGCGACGGCATCCACCAGGCGGTGGTCAAGGATGTGGCCGACATCTTTAGGGGCAAGAATGCCCAGCAGCTGGAGGAGATGCG
SizeHit CountTotal Norm


droEle1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
9 scf7180000491194:539733-539821 + 82.72
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTC---TGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGGAGGTGAGTATCTTGATGTGGTTGGCTCTTCTGGGCGTCCTCTCACATCTACATATTCACAGGCGGCGTGAGCTGCG
SizeHit CountTotal Norm


droRho1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000779488:582443-582528 + 88.59
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTGCGCAGGAGGTGAGTATCTTGATGTGGTCGGCTTTAGCGGTCCTCTCACATCTACATATTCACAGGCGCCGTGAGCTGCG
SizeHit CountTotal Norm
6 scf7180000780043:55871-55952 + 40.76
CAAGCTGCGC-----AGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
TGGACTACGACTACTCGGCGGTGGAAATCGAGCCGCCGGCGGAGCAGCTGGCCAACTCGCC---------GCGCAGCGAGCGGGAACGGCT
SizeHit CountTotal Norm


droKik1 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000302388:1718910-1719000 - 73.03
CAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTGGCG----GTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAACTGCGTCGAAGGTGAGTATTGTGGGTGTGGGTGGCTCTGGCGGCCAGTCCTCTCACATCACCATATTCACAGGCGTCGCGAGCTACG
SizeHit CountTotal Norm
2 scf7180000302621:98759-98860 + 33.1
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCG-------------------TGAGCTGCG
CATCTGCCGCGGATAATTGCAGCCGCATAATGGTCGGTAATCGGGGGATCCTGATACCC---CACTCGCAGGCCCTGCAGTATACCAGCGAGTACCTGACCAATG
SizeHit CountTotal Norm
1 scf7180000302474:784878-784904 + 21.43
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
-----------------------------------------------------------ACACAATCCCAGTCGCCTGGAGGCGCT
SizeHit CountTotal Norm
None
6 scf7180000302696:473785-473806 - 16.12
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CA------------------------------------------------------------TAACCACAGCAGC----AGCCGCA
SizeHit CountTotal Norm
None


droAna3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
7 scaffold_13340:4690326-4690418 - 73.81
CAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCT------GGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CAAGCTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTTATTTGGCCGGTCCTCTCACATCTCCATATTCACAGGCGTCGAGAGCTGCG
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............GTGAGTATAGTGGATGTGGGTGG.......................................................231564.00176.00385.003.000.00
........................................................TCTCACATCTCCATATTCACAG...............221265.0012.0094.0051.00108.00
........................................................TCTCACATCTCCATATTCACAGT..............231182.0033.0049.0075.0025.00
........................................................TCTCACATCTCCATATTCACA................211154.008.0029.0047.0070.00
...............GTGAGTATAGTGGATGTGGGTGGT......................................................24146.0013.0033.000.000.00
........................................................TCTCACATCTCCATATTCAC.................20135.001.0014.008.0012.00
........................................................TCTCACATCTCCATATTCACAGTT.............24129.002.0016.008.003.00
...............GTGAGTATAGTGGATGTGGGTG........................................................22117.008.009.000.000.00
................TGAGTATAGTGGATGTGGGTGG.......................................................22116.002.0013.001.000.00
...............GTGAGTATAGTGGATGTGGGT.........................................................21114.006.007.000.001.00
...............GTGAGTATAGTGGATGTGGG..........................................................20113.0010.003.000.000.00
...............GTGAGTATAGTGGATGTGGGTGGTT.....................................................25111.002.009.000.000.00
...............GTGAGTATAGTGGATGTGG...........................................................1919.001.008.000.000.00
...............GTGAGTATAGTGGATGTGGGTGT.......................................................2318.002.006.000.000.00
........................................................TCTCACATCTCCATATTCA..................1918.000.002.006.000.00
................TGAGTATAGTGGATGTGGGTGGT......................................................2318.001.007.000.000.00
...............GTTAGTATAGTGGATGTGGGTGG.......................................................2317.000.007.000.000.00
...............GTGAGTATAGTGGATGTGGGAGG.......................................................2316.002.004.000.000.00
........................................................TCTCACATCTCCATATTCACAT...............2216.000.000.000.006.00
...............GTGAGTATAGTGGATGTGGGCGG.......................................................2316.003.003.000.000.00
...............GTGAGTATAGTGGATGTTGGTGG.......................................................2315.001.004.000.000.00
...............GTGAGTATAGTGGATGTGGGTTG.......................................................2314.000.003.001.000.00
................TGAGTATAGTGGATGTGGGTG........................................................2114.000.004.000.000.00
........................................................TATCACATCTCCATATTCACAG...............2214.000.002.000.002.00
................TGAGTATAGTGGATGTGGGT.........................................................2014.001.001.001.001.00
.................GAGTATAGTGGATGTGGGTGG.......................................................2113.000.003.000.000.00
...............GTTAGTATAGTGGATGTGGGTGT.......................................................2313.000.003.000.000.00
........................................................TCTCACATCTCCATATTCACAGA..............2313.000.002.000.001.00
........................................................TCTCACATCTCCATATTCACC................2113.000.001.000.002.00
...............GTGAGTATAGTTGATGTGGGTGG.......................................................2313.001.002.000.000.00
...............GTGAGTATAGTGGATGTGGGGGG.......................................................2313.001.001.001.000.00
.........................................................CTCACATCTCCATATTCACAGT..............2213.002.001.000.000.00
........................................................TCTCACATCTCCATATTCACCG...............2213.000.001.000.002.00
...............GTGAGCATAGTGGATGTGGGTGG.......................................................2313.002.001.000.000.00
........................................................TCTCACATCTCCATATTCACAC...............2213.000.000.000.003.00


droBip1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000396359:499291-499384 + 69.4
CAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCT-------GGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
AAAGTTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTAAATATGGCCAGTCCTCTCACATCTCCATATTCACAGGCGTCGCGAGCTGCG
SizeHit CountTotal Norm


dp4 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 chr2:1751559-1751647 - 77.41
CAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG--GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTGGTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCG
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
....................................................TCTCACATCTCTATATTCACAG...............221644.008.00425.00211.000.00
....................................................TCTCACATCTCTATATTCACA................211243.005.00142.0094.002.00
....................................................TCTCACATCTCTATATTCACAGT..............231222.0029.0048.00145.000.00
...............GTGGGTATCGTGCTTGTGGGTGG...................................................23169.0026.0029.0014.000.00
....................................................TCTCACATCTCTTTATTCACAG...............22118.000.0018.000.000.00
....................................................TCTCACATCTCTTTATTCACA................21112.000.0012.000.000.00
....................................................TCTCACATCTCTATATTCAC.................20112.000.004.008.000.00
...............GTGGGTATCGTGCTTGTGGGT.....................................................2116.003.001.002.000.00
....................................................TCTCACATCTCTATATTCACAGA..............2316.001.003.002.000.00
....................................................TCGCACATCTCTATATTCACAG...............2215.000.003.002.000.00
....................................................TCTCACATCTCTATATTCA..................1914.001.001.002.000.00
....................................................TCTCACATCTCTATCTTCACA................2114.000.003.001.000.00
....................................................TCTCACATCTCTATATTCACCG...............2214.000.003.001.000.00
....................................................TCTCACATCTCTATATTCACAC...............2214.001.002.001.000.00
...............GTGGGTATCGTGCTTGTGGGTG....................................................2213.000.003.000.000.00
....................................................TCTCACATCTCTTTATTCACAGT..............2313.000.003.000.000.00
....................................................TTTCACATCTCTATATTCACAG...............2213.001.002.000.000.00
....................................................TCTCACATATCTATATTCACAG...............2213.000.003.000.000.00
...............GTGGGTATCGTGCTTGTGG.......................................................1913.003.000.000.000.00
...............GTGGGTATCGTGCTTGTGGGTGGC..................................................2413.002.001.000.000.00
....................................................TCTCACATCTCTATATGCACAG...............2213.000.002.001.000.00
....................................................TCTCACTTCTCTATATTCACAG...............2213.000.002.001.000.00
....................................................TCTCACATCTCTATCTTCACAG...............2213.000.002.001.000.00
....................................................TCTCACATCTCTCTATTCACAG...............2213.000.002.001.000.00
......................................................TCACATCTCTATATTCACAG...............2013.000.000.003.000.00
....................................................TCTCACATCTCTCTATTCACA................2113.000.001.002.000.00
...............GTGGGTATCGTGCTTGTGGG......................................................2013.001.001.001.000.00
2 Unknown_singleton_959:125506-125524 + 14.29
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
-------------------------------------------------------------------ACGAGCGGCTGGAGGCGCG
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None


droPer1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 super_7:1904970-1905058 - 77.41
CAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG--GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTGGTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCG
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
....................................................TCTCACATCTCTATATTCACAG...............221646.002.00107.00214.00109.00214.00
....................................................TCTCACATCTCTATATTCACAGT..............231233.002.009.0098.00116.008.00
....................................................TCTCACATCTCTATATTCACA................211162.000.0049.0073.0035.005.00
...............GTGGGTATCGTGCTTGTGGGTGG...................................................231110.0069.0012.0015.0011.003.00
...............GTGGGTATCGTGCTTGTGGGT.....................................................21119.0013.000.003.003.000.00
...............GTGGGTATCGTGCTTGTGGG......................................................20119.0015.000.001.003.000.00
....................................................TCTCACATCTCTATATTCACACC..............23118.000.001.000.000.0017.00
....................................................TCTCACATCTCTATATTCAC.................20117.000.001.005.0011.000.00
....................................................TCTCACATCTCTATATTCACAC...............2219.000.002.002.000.005.00
....................................................TCTCACATCTCTATATTCACAGA..............2317.000.002.001.002.002.00
...............GTGGGTATCGTGCTTGTGGGTG....................................................2216.003.003.000.000.000.00
...............GTGGGTATCGTGCTTGTGG.......................................................1915.004.000.000.001.000.00
...............GTGGGTATCGTGCTTGTGGT......................................................2015.004.000.001.000.000.00
....................................................TCTCACATCTCTATATTCACAGTT.............2415.000.001.001.003.000.00
....................................................TCTCACATCTCTATATTCA..................1914.000.000.001.003.000.00
...............GTGGGTATCGTGCTTGTGGGTGGC..................................................2414.004.000.000.000.000.00
....................................................TCTCACATCTCCATATTCACAG...............2214.000.004.000.000.000.00
....................................................TCTCACATCTCTATCTTCACAG...............2214.000.001.001.002.000.00
...............GTGGGTATCGTGCTTGTGGGTGGT..................................................2414.003.001.000.000.000.00
....................................................TCTCACATCTCCATATTCAC.................2013.000.002.000.000.001.00
......................................................TCACATCTCTATATTCACA................1913.000.001.001.001.000.00


droWil1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_181089:9616822-9616911 - 73.63
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTC----TGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
AAAGTTGCGCCGTAGGTGAGTATCGGGTTGTGATTGGCTCCTTGTGGTAGTCCTCTCACATCTCTATATTCACAGGCGTCGCGAGCTGCG
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.....................................................TCTCACATCTCTATATTCACAG...............2216582.008.001898.001029.003647.00
.....................................................TCTCACATCTCTATATTCACA................211943.002.00293.00406.00242.00
...............GTGAGTATCGGGTTGTGATTGG.....................................................221649.00134.00241.00266.008.00
.....................................................TCTCACATCTCTATATTCACAGT..............231406.0010.00229.0092.0075.00
.....................................................TCTCACATCTCTATATTCAC.................201123.000.0017.0026.0080.00
...............GTGAGTATCGGGTTGTGATTG......................................................21178.0021.0039.0014.004.00
.....................................................TCTCACATCTCTATATTCACAC...............22147.001.002.001.0043.00
.....................................................TCTCACATCTCTATATTCA..................19128.000.004.0012.0012.00
.....................................................TCTCACATCTCTATATTCACAGA..............23123.001.004.002.0016.00
.....................................................TATCACATCTCTATATTCACAG...............22119.000.0015.004.000.00
.....................................................TCTCACATCTCTATATTCACAA...............22114.000.008.004.002.00
.....................................................TCTAACATCTCTATATTCACAG...............22114.000.007.007.000.00
......................................................CTCACATCTCTATATTCACAG...............21112.000.003.004.005.00
.....................................................TCCCACATCTCTATATTCACAG...............22112.000.002.003.007.00
.....................................................CCTCACATCTCTATATTCACAG...............22111.000.003.005.003.00
.....................................................TCTCACATCTCTGTATTCACAG...............22111.000.000.000.0011.00
.....................................................TCTCACATCTCTATATTCACAGC..............23110.000.002.000.008.00
.....................................................TCTCACATCTCTATATTCACAGG..............2319.000.000.000.009.00
.....................................................TCTCACATCTCTATATTCACGG...............2218.000.002.000.006.00
.....................................................TCTCACATCTCCATATTCACAG...............2218.000.002.005.001.00
...............GTGAGTATCGGGTTGTGATTGGT....................................................2318.003.003.002.000.00
.....................................................TCTCACATCTCTATATTCAAAG...............2217.000.003.003.001.00
.....................................................TCTCAAATCTCTATATTCACAG...............2217.000.003.004.000.00
.....................................................TCTCACATCTCxxTATTCACAG...............2017.000.004.002.001.00
.....................................................TCTCGCATCTCTATATTCACAG...............2216.000.001.003.002.00
.......................................................TCACATCTCTATATTCACAG...............2016.000.002.002.002.00
.....................................................TCTCACATCTCTATACTCACAG...............2216.000.001.003.002.00
.....................................................TCTCACATCTCTTTATTCACAG...............2215.000.000.001.004.00
.....................................................TCTCATATCTCTATATTCACAG...............2215.000.001.002.002.00
.....................................................TCTCACATCTCTCTATTCACAG...............2215.000.000.000.005.00
.....................................................TCTCACATCTCTATATTCACAT...............2215.000.004.000.001.00
.....................................................TCTCAAATCTCTATATTCACA................2114.000.000.004.000.00
.....................................................TCTCACATCTATATATTCACAG...............2214.000.000.002.002.00
...............GTGAGTATCGGGTTGTGATT.......................................................2014.001.002.000.001.00
.....................................................TCTCACATCTCTATATTCATAG...............2214.000.002.000.002.00
.....................................................TCTCACATTTCTATATTCACAG...............2214.000.002.002.000.00
.....................................................TCTCACACCTCTATATTCACAG...............2214.000.002.002.000.00
.....................................................TCTCACATCCCTATATTCACAG...............2214.000.001.000.003.00
.....................................................TCTCACATCTCTATATTTACAG...............2214.000.001.000.003.00
.....................................................TCTCACATCTCTATGTTCACAG...............2213.000.001.001.001.00
.....................................................TCTCACATCTCTATATTCACCG...............2213.000.002.001.000.00
.....................................................TCTCACATCTCTATATTCACAGTT.............2413.000.000.003.000.00
.....................................................TCTCACATCTCTACATTCACAG...............2213.000.002.001.000.00
.....................................................TCTCCCATCTCTATATTCACAG...............2213.000.002.001.000.00
.....................................................CCTCACATCTCTATATTCACAGT..............2313.000.003.000.000.00
.....................................................TCTCACATCTCTATATTCGCAG...............2213.000.003.000.000.00
.....................................................CCTCACATCTCTATATTCACA................2113.000.000.003.000.00
.....................................................TCTCACATCTCTATATTAACAG...............2213.000.000.003.000.00
......................................................CTCACATCTCTATATTCACAGT..............2213.002.000.000.001.00
.....................................................TCTAACATCTCTATATTCACA................2113.000.002.001.000.00
.....................................................TCTCACATCTCTATATTCACAGAA.............2413.000.001.000.002.00
.....................................................TCTCACATATCTATATTCACAG...............2213.000.001.002.000.00
.....................................................TCTCACATCTCTATATCCACAG...............2213.000.002.001.000.00
...............GTGAGTATCGGGCTGTGATTGG.....................................................2213.000.001.002.000.00
.....................................................TATCACATCTCTATATTCACA................2113.000.000.003.000.00
.....................................................TCTCACCTCTCTATATTCACAG...............2213.000.003.000.000.00


droVir3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scaffold_13047:780932-781019 + 69.42
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCT--CTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
AAAGCTGCGTCGTAGGTGAGTAATCAGTTGTGGGTGGCTTTTTGAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGTGAGTTGCG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...................................................TCTCACATCTCTTTATTCACAG...............2211168.0038.00204.0038.00124.00764.00
...............GTGAGTAATCAGTTGTGGGTGG...................................................221872.00683.0078.00109.001.001.00
...................................................TCTCACATCTCTTTATTCACA................211305.0020.00196.0020.006.0063.00
...................................................TCTCACATCTCTTTATTCACAGT..............231128.0055.0052.005.007.009.00
...............GTGAGTAATCAGTTGTGGGTG....................................................21167.0029.007.0021.007.003.00
...................................................TCTCACATCTCTTTATTCAC.................20164.000.0035.001.001.0027.00
...............GTGAGTAATCAGTTGTGGGTGGT..................................................23147.0031.001.0015.000.000.00
...............GTGAGTAATCAGTTGTGGGTGT...................................................22124.0018.001.005.000.000.00
...............GTGAGTAATCAGTTGTGGGTGGC..................................................23118.0013.001.004.000.000.00
...................................................TCTCACATCTCTTTATTCACC................21116.000.001.000.008.007.00
...............GTGAGTAATCAGTTGTGGGTTG...................................................22115.001.001.0013.000.000.00
...................................................TCTCACATCTCTTTATTCACAC...............22115.000.000.000.001.0014.00
....................................................CTCACATCTCTTTATTCACAGT..............22113.007.005.000.000.001.00
...............GTGAGTAATCAGTTGTGGGTGGA..................................................23111.009.000.002.000.000.00
...............GTGAGTAATCAGTTGTGGGTGA...................................................2219.006.001.002.000.000.00
...............GTGAGTAATCAGTTGTGGGT.....................................................2018.006.001.001.000.000.00
...................................................TCTCACATCTCTTTATTCCCAG...............2217.000.000.000.000.007.00
...................................................TCTCACATCTCTTTATTCA..................1917.000.003.001.000.003.00
...................................................TCTCACATCTCTTTATTC...................1816.000.000.000.000.006.00
................TGAGTAATCAGTTGTGGGTGGA..................................................2216.005.001.000.000.000.00
...............GTGAGTAATCAGTTGCGGGTGG...................................................2215.004.001.000.000.000.00
...............GTGAGTAATCAGTCGTGGGTGG...................................................2215.004.000.001.000.000.00
...............GTGAGTAATCAGTTGTGTGTGG...................................................2215.003.000.002.000.000.00
................TGAGTAATCAGTTGTGGGTGG...................................................2114.003.000.001.000.000.00
...............GTGGGTAATCAGTTGTGGGTGG...................................................2214.002.001.001.000.000.00
...................................................TCTCACATCTCTTTATTCACAT...............2214.000.001.003.000.000.00
...............GTGAGTAATCAGTTGTGGGTGGTC.................................................2414.004.000.000.000.000.00
...................................................TCTCACATCTCTTTCTTCACA................2113.000.003.000.000.000.00
...................................................TCTCACAGCTCTTTATTCACA................2113.000.003.000.000.000.00
...............GTGAGTAATCAGTTGTGGG......................................................1913.001.000.001.000.001.00
...................................................TCTCACATATCTTTATTCACAG...............2213.000.001.000.001.001.00
...............GTGAGTAATCAGTTGTTGGTGG...................................................2213.000.000.003.000.000.00
...............GTGAGTAATCAGTTGTGGTTGG...................................................2213.001.001.001.000.000.00
...............GTGAGTAATCAGTTGTGGGGGG...................................................2213.002.000.001.000.000.00
...................................................TCTCACATCTCTTTATTCACAGTT.............2413.002.001.000.000.000.00
...................................................TCTCACATCTCTTTATTCACAGA..............2313.001.000.001.000.001.00
...................................................TCTCACATCTCCTTATTCACA................2113.000.002.001.000.000.00
...................................................TCCCACATCTCTTTATTCACAG...............2213.000.000.000.000.003.00
8 scaffold_12928:963010-963086 - 41.67
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTC--CTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CAGGATCAGGAGGAGGAGGTGGTGGAGGAGGAGGGGGAGGGGGAGTACGACTCTGAC-----------AACATGGCCAGTCGACGGCG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
....................GGTGGAGGTGGAGGTGGA..................................................1890.440.440.000.000.000.00
.........GAGGAGGAGGAGGAGGAGGAGGA........................................................2322.001.500.000.000.000.50
.................GGTGGTGGAGGAGGAGGTGGTGG................................................2321.501.500.000.000.000.00
......CAGGAGGAGGAGGAGGAGGAGGAGGAG.......................................................2713.003.000.000.000.000.00
.......................GGAGGAGGAGGAGGAGGAGGA............................................21100.200.000.100.000.000.10
...........GGAGGAGGAGGAGGAGGAGGA........................................................21100.200.000.100.000.000.10
......CAGGTGGAGGAxGTGGTGGAG.............................................................2012.002.000.000.000.000.00
........GGAGGAGGAGGAGGAGGAGGA...........................................................21100.200.000.100.000.000.10
.................GGTGGTGGAGGAGGAGGT.....................................................1850.400.400.000.000.000.00
........GGAGGAGGAGGAGGAGGAGGAGGA........................................................2421.000.500.500.000.000.00
................TGGTGGTGGAGGTGGAGG......................................................1860.170.000.170.000.000.00
..................GTGGTGGCGGAGGAGGTGG...................................................1950.200.200.000.000.000.00
.........GAGGAGGCGGTGGTGGAGGAGGAGGAG....................................................2711.000.001.000.000.000.00
....................GGTGGAGGTGGAGGAGGAGG................................................2070.140.140.000.000.000.00
.......AGGTGGAGGAGCTGGTGG...............................................................1820.500.000.000.000.500.00
..................GTGGTGGAGGxGGAGGGG....................................................1720.500.000.500.000.000.00
..............GGAGGCGGTGGAGGAGGT........................................................1850.200.200.000.000.000.00
..................GAGGAGGAGGAGGAGGG.....................................................17180.060.000.060.000.000.00
........GGCGGAGGAGGTGGAGGAGGA...........................................................2160.170.170.000.000.000.00
.........GAGGTGGAGGTGGAGGAGGAGGA........................................................2311.001.000.000.000.000.00
..............GGAGGTGGCGGAGGCGGA........................................................1840.250.250.000.000.000.00
........................GAGGGGGAGGGGGAGGGCG.............................................1930.330.330.000.000.000.00
..............GGTGGTGGTGGAGGAGGAGGGGGT..................................................2411.000.001.000.000.000.00
...........................GAGGTGGGGGAGGGGGGG...........................................1811.001.000.000.000.000.00
..............GGAGGTGGGGGAGGAGGAGGA.....................................................2111.001.000.000.000.000.00
........TGAGGAGGAGGAGGTGGAGG............................................................2020.500.500.000.000.000.00
.................GGAGGTGGAGGCGGAGG......................................................17110.090.000.090.000.000.00
........................GTGGAGGTGGGGGAGGGG..............................................1811.001.000.000.000.000.00
................AGGTGGCGGAGGAGGAGG......................................................1830.330.330.000.000.000.00
.AGGAGAAGGAGGAGGAGG.....................................................................18110.090.090.000.000.000.00
.........GAGGTGGAGGTGGAGGAGGAG..........................................................2120.500.500.000.000.000.00
...................TGGTGGAGGAGGAGGTGGT..................................................1930.330.330.000.000.000.00
.........GAGGAGGAGGAGGAGGAGGAGGAGG......................................................2520.500.000.000.500.000.00
..............................GAGGGGGAGGGGGAGGGCG.......................................1930.330.330.000.000.000.00
.......................GGAGGTGGAGGGGGAGGGGGAGGA.........................................2411.000.001.000.000.000.00
...............GTGGTGGTGGAGGAGGAGGGGGTGG................................................2511.001.000.000.000.000.00
..........AGGAGGAGGAGGAGGAGGAGGA........................................................2260.170.170.000.000.000.00
......GAGGAGGAGGAGGTGGCG................................................................1850.200.000.000.200.000.00
...............GAGGTGGTGGAGCAGGAGGCGG...................................................2211.000.001.000.000.000.00
...............GAGGTGGGGGAGGAGGAGGAGGA..................................................2311.001.000.000.000.000.00
.........................AGGAGGAGGGCGAGGAGG.............................................1811.001.000.000.000.000.00
............GAGGAGGAGGAGGAGGAGGAGG......................................................2250.200.200.000.000.000.00
...............GTGGTGGTGGAGGAGGAGGGGGGGGGG..............................................2711.000.001.000.000.000.00
....AGGAGGAGGAGGAGGTGGT.................................................................1940.250.250.000.000.000.00
...............GAGGTGGAGGAGGAGGAGGC.....................................................2011.000.000.000.000.001.00
.......AGGAGGAGGAGGAGGTGGT..............................................................1940.250.250.000.000.000.00
............GTGGTGGTGGTGGAGGAG..........................................................1830.330.000.330.000.000.00
.........GAGGAGGAGGAGGTGGCG.............................................................1850.200.000.000.200.000.00
....AACAGGAGGAGGAGGAGG..................................................................1830.330.330.000.000.000.00
...............GAGGTGGTGGAGGTGGAGGTGGA..................................................2330.330.330.000.000.000.00
.......................GGAGGTGGAGGCGGAGG................................................17110.090.000.090.000.000.00
.......................GGAGGAGGAGGAGGAA.................................................16190.050.000.050.000.000.00
................AGGTGGAGGAGGAGGAGGCG....................................................2030.330.330.000.000.000.00
.................GGTGGAGGAGGAGGAGGC.....................................................1860.170.170.000.000.000.00
.....................GTGGCGGAGAAGGGGGAGGGGG.............................................2211.001.000.000.000.000.00
........................GAGGAGGAGGAGGAGGG...............................................17180.060.000.060.000.000.00
...........GGTGGAGGTGGAGGAGGAGG.........................................................2070.140.140.000.000.000.00
....................GGTGGAGGAGGAGGAGGC..................................................1860.170.170.000.000.000.00
...........GGCGGAGGAGGTGGAGGAGGA........................................................2160.170.170.000.000.000.00
..............GGAGGCGGTGGAGGAGGAGGAGGAG.................................................2511.001.000.000.000.000.00
...........................GAGGAGGCGGAGGCGGAG...........................................1860.170.000.170.000.000.00
..................GTGGTGGAGGAGGAGGT.....................................................1750.200.000.200.000.000.00
...........GGTGGTGGTGGTGGAGGAGGA........................................................2111.001.000.000.000.000.00
........................GAGGAGGAGGGGGTTGGG..............................................1811.000.001.000.000.000.00
.......CGGAGGAGGAGGTGGTGGAGGAGGAG.......................................................2611.000.001.000.000.000.00
...........GGTGGTGGTGGTGGAGGA...........................................................1840.250.250.000.000.000.00
.........GAGGAGGCGGTGGTGGAGGGGGAGG......................................................2511.000.001.000.000.000.00
........................GAGGGGGAGGGGGAGGGG..............................................1820.500.500.000.000.000.00
...............GAGGTGGGGGAGGAGGAGGAGGAGG................................................2511.001.000.000.000.000.00
....................GGTGGAGGAGGAGGCGGTGG................................................2050.200.200.000.000.000.00
......................TGGAGGTGGAGGTGGA..................................................16140.070.000.070.000.000.00
...................TGGTGGAGGAGAAGGGGA...................................................1811.001.000.000.000.000.00
.....TGAGGAGGAGGAGGTGGAGG...............................................................2020.500.500.000.000.000.00
.............AGGTGGTGGTGAAGGAGGA........................................................1911.001.000.000.000.000.00
............GAGGAGGTTGTCGAGGAG..........................................................1811.000.000.000.000.001.00
..............GGTGGAGGTGGAGGAGGAGG......................................................2070.140.140.000.000.000.00
..............GGTGGTGGTGGAGGAGGAGGT.....................................................2120.500.000.500.000.000.00
....................GTTGGCGGAGGAGGGGGAGG................................................2011.001.000.000.000.000.00
.......AGGAGGAGGAGGAGGAGGAGGA...........................................................2260.170.170.000.000.000.00
..............GGTGGTGGTGGTGGAGGA........................................................1840.250.250.000.000.000.00
........GGAGGTGGAGGTGGAGGAGGAGGAGG......................................................2611.001.000.000.000.000.00
....................GGTGGAGGAGGAGGAGGAGGAGGA............................................2440.250.000.250.000.000.00
................AGGCGGAGGAGGAGGAGG......................................................18100.100.100.000.000.000.00
...............GTGGTGGTGGTGGAGGAG.......................................................1830.330.000.330.000.000.00
..................GTGGTGGTGGGGGAGGGG....................................................1811.001.000.000.000.000.00
.....................GTGGAGGTGGAGGTGGAG.................................................18100.100.000.100.000.000.00
............GAGGTGGAGGTGGAGGAGGAG.......................................................2120.500.500.000.000.000.00
.........GAGGTGGAGGTGGAGGAGGAGGAGG......................................................2511.001.000.000.000.000.00
..............GGAGGTGGAGGCGGAGG.........................................................17110.090.000.090.000.000.00
.................GGTGGTGGAGCAGGAGGGC....................................................1911.001.000.000.000.000.00
.........GAGGAGGAGGAGGAGGAGGAGG.........................................................2250.200.200.000.000.000.00
2 scaffold_12970:6619102-6619116 + 9.52
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GCAACTGTCTGGAAG-----------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None None


droMoj3 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scaffold_6540:4775668-4775755 + 71.59
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCG--GTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
CAAGCTGCGGCGCAGGTGAGTAATCAGTTGTGGGTGGCTCTAGTGAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGAGAGTTGCG
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...................................................TCTCACATCTCTTTATTCACAG...............2211272.0042.00325.00282.00623.00
...............GTGAGTAATCAGTTGTGGGTGG...................................................2211042.00726.0049.0023.00244.00
...................................................TCTCACATCTCTTTATTCACA................211543.0020.0083.0067.00373.00
...................................................TCTCACATCTCTTTATTCACAGT..............231329.0059.00134.0095.0041.00
...............GTGAGTAATCAGTTGTGGGTGGT..................................................231133.00118.004.002.009.00
...............GTGAGTAATCAGTTGTGGGTG....................................................21189.0049.004.008.0028.00
...................................................TCTCACATCTCTTTATTCAC.................20183.000.0017.0017.0049.00
...............GTGAGTAATCAGTTGTGGGTGT...................................................22168.0049.003.003.0013.00
...............GTGAGTAATCAGTTGTGGGTGGC..................................................23127.0025.000.000.002.00
....................................................CTCACATCTCTTTATTCACAGT..............22126.006.009.004.007.00
...............GTGAGTAATCAGTTGTGGGT.....................................................20122.0020.001.001.000.00
...................................................TCTCACATCTCTTTATTCA..................19117.000.007.003.007.00
...............GTGAGTAATCAGTTGTGGGTGGA..................................................23116.0015.001.000.000.00
...................................................TCTCACATCTCTTTATTCACAGTT.............24115.000.004.009.002.00
...............GTGAGTAATCAGTTGTGGGTGGTT.................................................24114.0014.000.000.000.00
...................................................TCTCACATCTCTTTATTCACAGTC.............24113.003.005.004.001.00
...................................................TCTCACATCTCTTTATTCACCG...............22110.000.001.003.006.00
...................................................TCTCACATCTCTTTATTCACAT...............22110.000.003.005.002.00
.....................................................TCACATCTCTTTATTCACAG...............2019.000.003.002.004.00
...............GTGAGTAATCAGTTGTGGGTT....................................................2118.005.000.000.003.00
...................................................TCTCACATCTCTTTCTTCACAG...............2218.000.002.005.001.00
................TGAGTAATCAGTTGTGGGTGGT..................................................2218.007.000.000.001.00
...............GTGAGTAATCAGTTGTGGGTGGTC.................................................2418.008.000.000.000.00
...............GTGAGTAATCAGTTGTGGGTTG...................................................2217.000.000.007.000.00
...................................................TCTCACATATCTTTATTCACAG...............2217.000.000.003.004.00
...................................................TCTCACATCTCTTTATTCACAC...............2217.000.002.000.005.00
....................................................CTCACATCTCTTTATTCACAG...............2116.001.002.002.001.00
...................................................TCTCACATCTCTTTATTCACAGC..............2316.000.003.000.003.00
...................................................TCTCACATCTCTATATTCACAG...............2216.000.002.001.003.00
...................................................CCTCACATCTCTTTATTCACAG...............2215.000.004.001.000.00
................TGAGTAATCAGTTGTGGGTGG...................................................2114.001.001.000.002.00
...................................................TATCACATCTCTTTATTCACAG...............2214.000.003.000.001.00
.....................................................TCACATCTCTTTATTCACA................1914.000.000.000.004.00
...............GTGAGTAATCAGTTGTGGGTGA...................................................2214.004.000.000.000.00
................TGAGTAATCAGTTGTGGGTGGA..................................................2214.002.000.000.002.00
...................................................TCTCACATCTCTTTCTTCACA................2113.000.000.001.002.00
....................................................CTCACATCTCTTTATTCACAGTT.............2313.000.001.002.000.00
...............GTGAGTAATCAGTTGTGGG......................................................1913.003.000.000.000.00
...................................................TCTCACATCTCTTTATTCACGG...............2213.000.000.001.002.00
...................................................TCTCATATCTCTTTATTCACA................2113.000.000.000.003.00
...............GTGAGTAATCAGTTGTGGGTGGCT.................................................2413.002.000.000.001.00
...................................................TCTCACATCTCTTTGTTCACAG...............2213.000.000.002.001.00
...................................................TCTCACATCTATTTATTCACAG...............2213.000.000.001.002.00
...................................................TCTCACATCTCTTTATTCCCAG...............2213.000.001.002.000.00
...............GTGAGTAATCAGTTGTGGGTGTA..................................................2313.000.000.000.003.00
...................................................TCTCAAATCTCTTTATTCACAG...............2213.000.000.000.003.00
...................................................TCTCACATCGCTTTATTCACAG...............2213.000.002.000.001.00
...............GTGAGTAATCAGTTGTGGGTGTC..................................................2313.003.000.000.000.00
...................................................TATCACATCTCTTTATTCACA................2113.000.000.000.003.00
...................................................TCTCACATATCTTTATTCACA................2113.000.000.000.003.00
...................................................TATCACATCTCGTTATTCACAG...............2213.000.001.001.001.00
...................................................TCTCACATCTCTTTCTTCACAGT..............2313.000.000.003.000.00
...................................................TCTCACATCTCTCTATTCACAG...............2213.000.000.001.002.00
...................................................TCTCGCATCTCTTTATTCACA................2113.000.001.001.001.00
...............GTGAGTAATCAGTTGTGGGTGGTA.................................................2413.000.001.000.002.00
...................................................TCTCACATCTCGTTATTCACAG...............2213.000.000.001.002.00
...................................................TCCCACATCTCTTTATTCACAG...............2213.000.000.002.001.00
...............GTGAGTAATCAGTTGTGGGTGC...................................................2213.002.001.000.000.00
11 scaffold_6496:22926477-22926539 - 42.05
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTC--TGGCGGTCCT-CTCACATTTAC----ATATTCA-CAGGCGCCGTGAGCTGCG
T------------------------------GGTCGGCTCTTTGGCAGTCCGGCTAACACT-ATGGCGGCACTCAGTCTGCGTCGCAAGCGGGA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo


droGri2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
14 scaffold_14906:5529285-5529380 - 54.69
CAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCT----------GGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCG
GAAATTGCGGCGCAGGTGAGTAATCAGTTGTGGGTGGCTTTTGTTCTTAGGGAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGCGAATTGCG
SizeHit CountTotal NormV109
Male body
...............GTGAGTAATCAGTTGTGGGTGG...........................................................22177.0077.00
...........................................................TCTCACATCTCTTTATTCACAG...............2214.004.00
...............GTGAGTAATCAGTTGTGGGT.............................................................2013.003.00
...............GTGAGTAATCAGTTGTGGGTGT...........................................................2213.003.00
...............GTGAGTAATCAGTTGTGGGTG............................................................2112.002.00
...............GTGAGTAATCAGTTGTGGGTGGC..........................................................2312.002.00
...........................................................TCTCACATCTCTTTATTCACA................2112.002.00
...........................................................TCTCACATCTCTTTATTCACAGT..............2312.002.00
...............GTGAGTAATCAGTTGTGGGTTT...........................................................2212.002.00
...............GTGAGTAACCAGTTGTGGGTGG...........................................................2212.002.00
...............GTGAGTAATCAGTTGTGTGTGG...........................................................2211.001.00
...............GTGAGTAATCAGTTGTGGGTT............................................................2111.001.00
...............GTGAGTAATCAGTTGTGGGTGGA..........................................................2311.001.00
...............GTGAGTCATCAGTTGTGGGTGG...........................................................2211.001.00
...............GTGAGTAATCAGTTGTGGGTGTA..........................................................2311.001.00
................TGAGTAATCAGTTGTGGGTGG...........................................................2111.001.00
...............GTGAGTAATCAGTTGTGGGTGGCA.........................................................2411.001.00
................TGAGTAATCAGTTGTGGGTGGT..........................................................2211.001.00
...............GTGAGTAATCAGTTGTGGG..............................................................1911.001.00
................TGAGTAATCAGTTGTGGGTGGAT.........................................................2311.001.00
...............GTGAGTAATCAGTTGTGAGTGT...........................................................2211.001.00
...............GTGAGCAATCAGTTGTGGGTGG...........................................................2211.001.00
...........................................................TCCCACATCTCTTTATTCACAG...............2211.001.00
............................................................CTCACATCTCTTTATTCACAGT..............2211.001.00
............................................................CTCACATCTCTTTATTCACAG...............2111.001.00
...............TTGAGTAATCAGTTGTGGGTGG...........................................................2211.001.00


Generated: 04/20/2012 at 05:24:43 EDT