CG3160_in3- 12- and 20-way alignments

CG3160_in3	chrX:5582203-5582254 -	Candidate
	[View on UCSC Genome Browser {Cornell Mirror}]	mirtron

Legend:

   mature strand at position 5582230-5582254
   star strand at position 5582204-5582225
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:5582188-5582269 -	TTGTCTACCTTTGTGGTAAGTTGCATTGTATTC---------TAAGC------------------------------------------------------------------------ACTAGTAAATACAAATGATATACTTACAGAAGCCTCGAAGGCGT
droSim1	chrX:4333816-4333897 -	TTGTCCACCTTTGTGGTAGGTTGCATTGTATCC---------TAAAC------------------------------------------------------------------------ACTATTAAATACTAATGATATACTTACAGAAGCCCCGAAGGCGT
droSec1	super_4:1176184-1176265 +	TTGTCCACCTTTGTGGTAGGTTGCAGAATATTC---------AAAGC------------------------------------------------------------------------ACTATTAAATTCTAATGATATACTTACAGAAGCCCCGAAGGCGT
droYak2	chrX:2886884-2886965 +	TTGTCCACCTTTGTGGTAGGTTGCATTGTATTT---------AAAAC------------------------------------------------------------------------ACCATTAAATGCTAAATATATAATTACAGAAGCCTCGAAGGCGT
droEre2	scaffold_4690:2935043-2935124 -	TTGTCAACCTTTGTGGTAGGTTGCATTGTATTT---------AAAAC------------------------------------------------------------------------ACTATGAAGTACTAAATATGTACTTACAGAAGCCTCGAAGGCGT
droAna3	scaffold_13117:3260782-3260871 -	CTGCACACCTTTGTGGTGAGTtTtTttT---------------t--------gttTttTtTTtTtTttTttTtTTC---------------------------------ACATTTGAACACG-----------------ATTTTGCAGAAACCACGAAGGCGC
dp4	chrXL_group1e:588994-589086 -	CTGTCTCACTTTGTGGTAGATTCTAATGCTTAT---------AATAA-----CTTATAATTTCTTCATCATTTATC---------------------------------GCGTCT-----------------------GGTTTTTCAGAAGCGGCCAAGTCGC
droPer1	super_30:621799-621888 +	CTGTCTCACTTTGTGGTAGATTCTAATGCTTAT---------AA--------CTTATAATTTCTTCATCATTTATC---------------------------------GCGTCT-----------------------GGTTTTTCAGAAGCGGCCAAGTCGC
droWil1	scaffold_180702:827721-827807 -	ATGGCACATTTTATCGTAAGTTAATTTCAA---AAGGTTTTCTT-GC------------------------------------------------------------------------CAACTTAATGACAAATTTTTTGAATGCAGAAACCCAGGAGTCGC
droVir3	scaffold_12928:357066-357149 -	GTGGCGCATTTTGTGGTTGGCATTT---G----------------------------------TTTTACACTTGTCGCATGTTCTATAATACTCTAC------------------------------------------ATATTTTAGAAACCGAGGATACGG
droMoj3	scaffold_6328:487653-487744 +	TTGGGACACTTTGTGGTAAATGACATGCGAGGC---------TTCTCAACTTGCTCAAT--------CCATTTAAC------------TTATTCTGT------------------------------------------ATCTTGTAGAAATCGCCAACACGT
droGri2	scaffold_15203:6798783-6798893 -	CTGTCGCACTTTGTGGTAAGCAAAC---AA---GCAATATT--------------------------------ATTGTGTGATTAAAAAAACGAAATATTGTTACTATCAAATCT--------------TCGTTTTCTATCGATCTAGAAACAACGAACTCGC

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:5582188-5582269 -	NA	TTGTCTACCTTTGTGGTAAGTTGCAT--TGTATTCTAA---------------------------GCACTAGT--AAAT------------------ACAAATG--A-------------------------TATACTTACAGAAGCCTCGAAGGCGT
droSim1	chrX:4333816-4333897 -	1	TTGTCCACCTTTGTGGTAGGTTGCAT--TGTATCCTAA---------------------------ACACTATT--AAAT------------------ACTAATG--A-------------------------TATACTTACAGAAGCCCCGAAGGCGT
droSec1	super_4:1176184-1176265 +	1	TTGTCCACCTTTGTGGTAGGTTGCAG--AATATTCAAA---------------------------GCACTATT--AAAT------------------TCTAATG--A-------------------------TATACTTACAGAAGCCCCGAAGGCGT
droYak2	chrX:2886884-2886965 +	1	TTGTCCACCTTTGTGGTAGGTTGCAT--TGTATTTAAA---------------------------ACACCATT--AAAT------------------GCTAAAT--A-------------------------TATAATTACAGAAGCCTCGAAGGCGT
droEre2	scaffold_4690:2935043-2935124 -	1	TTGTCAACCTTTGTGGTAGGTTGCAT--TGTATTTAAA---------------------------ACACTATG--AAGT------------------ACTAAAT--A-------------------------TGTACTTACAGAAGCCTCGAAGGCGT
droEug1	scf7180000409095:622922-623003 -	1	TTATCCACATTTGTAGTAGGTTCCTA--CGGATTTCCA---------------------------TATCAATC--AAAT------------------ACTTAAG--A-------------------------TATATCCACAGAAACCACGGAGACGA
droBia1	scf7180000302069:240686-240767 +	1	CTAGCCACCTTTGTCGTAGGTTCCTA--GAACTGCCAA---------------------------TCTCTGTC--CAAT------------------ACTAAAA--A-------------------------TATACCCACAGAAGCCAAGAAGACGA
droTak1	scf7180000415704:943029-943121 +	1	TTAGCCACCTTTGTCGTGGGTTCCTA--GCACTATTCT---ATAT-----------ATCT-TT-ATATATCTATAT--ATC--------------AT----G-TA-T-------------------------ATATATCACAGAAACCGCGGAGACGG
droEle1	scf7180000491001:865333-865422 +	1	CTGTCCACCTTTGTGGTAAGTTCTTC--CTGATTTCGA---------------------------TCTCTATT--CTAT------TATTAC------GCTCAAGAAA-------------------------TACCCACACAGAAGTCACGAAGGCGT
droRho1	scf7180000779976:691191-691274 +	1	TTGTCTACATTTGTGGTATGTTTTTTTTCGAATTTCGG---------------------------TCGCTATT--CCAC------------------ACTAAAT--A-------------------------TGTACCCACAGAAGCCGCGAAGCCGT
droFic1	scf7180000454072:2528858-2528939 +	1	CTGTCGACTTTTGTGGTAGGTTCCTG--CAATCTGAGG---------------------------TGTTTATA--CCAA------------------ACTTAAG--G-------------------------TTTATCCACAGAAGCCACGCAGGCGT
droKik1	scf7180000302344:685348-685434 -	1	CTCGCCCACTTTGTGGTGAGTTTCCC--CCAGGCCCAG---------------------------ACG--ATT--CCAT------GCCGCT------GATTACTA-A-------------------------TTAACCCCCAGAAACCACGAAGGCGT
droAna3	scaffold_13117:3260782-3260871 -	1	CTGCACACCTTTGTGGTGAGTATATA--ATACAATAAT---------------------------ATTATATA--ATAA------TATTCAC---A-TTTGAAC--A-------------------------CGATTTTGCAGAAACCACGAAGGCGC
droBip1	scf7180000396434:597307-597385 +	1	CTCCACAGCTTTGTGGTGAGTATATA--GGACCCT-CC---------------------------GCAAT-TC--ATAT------------------TCTAA-T--A-------------------------GGATTCTTCAGAAACCACGCAGGCGC
dp4	chrXL_group1e:588994-589086 -	1	CTGTCTCACTTTGTGGTAGATTCTAA--TGCTTATAATAACTTATAATTTCTTCATCA---------------TTT--ATC--------------GC----G-T--C-------------------------TGGTTTTTCAGAAGCGGCCAAGTCGC
droPer1	super_30:621799-621888 +	1	CTGTCTCACTTTGTGGTAGATTCTAA--TGCTTATAAC---TTATAATTTCTTCATCA---------------TTT--ATC--------------GC----G-T--C-------------------------TGGTTTTTCAGAAGCGGCCAAGTCGC
droWil1	scaffold_180702:827721-827807 -	1	ATGGCACATTTTATCGTAAGTTAATT--TCAAAA---G-----------------GTT--TTCTTGCCAACTT--AATG------------------ACAAATT--T-------------------------TTTGAATGCAGAAACCCAGGAGTCGC
droVir3	scaffold_12928:357066-357149 -	3	GTGGCGCATTTTGTGGTTGGCATTTG--TTT-----------------------TACA---------------CTT--GTCGCATGTTCTATAAT--ACTCTAC--A----------------------------TATTTTAGAAACCGAGGATACGG
droMoj3	scaffold_6328:487653-487744 +	1	TTGGGACACTTTGTGGTAAATGACAT--GCGAGGCTTC----------------TCAACT-TG-CTCAATCCATTT--A------------------ACTTATTC-T-------------------------GTATCTTGTAGAAATCGCCAACACGT
droGri2	scaffold_15203:6798783-6798893 -	1	CTGTCGCACTTTGTGGTAAGCAAACA--AGCA-----------------------ATA--TT---ATT-------------GTGTGATTAAAAAA--ACGAAAT--ATTGTTACTATCAAATCTTCGTTTTCTATCGATCTAGAAACAACGAACTCGC

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

TTGTCTACCTTTGTGGTAAGTTGCATTGTATTC---------TAAGC------------------------------------------------------------------------ACTAGTAAATACAAATGATATACTTACAGAAGCCTCGAAGGCGT

Size

Hit Count

Total Norm

droSim1

TTGTCCACCTTTGTGGTAGGTTGCATTGTATCC---------TAAAC------------------------------------------------------------------------ACTATTAAATACTAATGATATACTTACAGAAGCCCCGAAGGCGT

Size

Hit Count

Total Norm

V044
Embryo

M023
Head

M024
Male body

M025
Embryo

droSec1

TTGTCCACCTTTGTGGTAGGTTGCAGAATATTC---------AAAGC------------------------------------------------------------------------ACTATTAAATTCTAATGATATACTTACAGAAGCCCCGAAGGCGT

Size

Hit Count

Total Norm

V113
Male body

V114
Embryo

V115
Head

droYak2

TTGTCCACCTTTGTGGTAGGTTGCATTGTATTT---------AAAAC------------------------------------------------------------------------ACCATTAAATGCTAAATATATAATTACAGAAGCCTCGAAGGCGT

Size

Hit Count

Total Norm

V046
Embryo

V052
Head

V120
Male body

V058
Head

M026
Head

droEre2

TTGTCAACCTTTGTGGTAGGTTGCATTGTATTT---------AAAAC------------------------------------------------------------------------ACTATGAAGTACTAAATATGTACTTACAGAAGCCTCGAAGGCGT	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...........TGTGGTAGGTTGTATAGT......................................................................................................................................	18	2	1.00	0.00	0.00	0.00	1.00
...........TGAGGTAGGTTGCATAGT......................................................................................................................................	18	1	1.00	0.00	0.00	0.00	1.00
...........TGTGGTAGGTTGTATAGTA.....................................................................................................................................	19	2	0.50	0.00	0.00	0.00	0.50

droAna3

CTGCACACCTTTGTGGTGAGTtTtTttT---------------t--------gttTttTtTTtTtTttTttTtTTC---------------------------------ACATTTGAACACG-----------------ATTTTGCAGAAACCACGAAGGCGC	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
......................................................TTTTTTTTTTTTTTTTTTT..........................................................................................	19	32	0.13	0.00	0.13	0.00	0.00
.......................................................TTTTTTTTTTTTTTTTTTT.........................................................................................	19	32	0.13	0.00	0.13	0.00	0.00
.....................................................TTTTTTTTTTTTTTTTTTT...........................................................................................	19	32	0.13	0.00	0.13	0.00	0.00
........................................................TTTTTTTTTTTTTTTTTTT........................................................................................	19	32	0.13	0.00	0.13	0.00	0.00
.....................................................ATTTTTTTTTTTTTTTTT............................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
......................................................ATTTTTTTTTTTTTTTTT...........................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
.......................................................ATTTTTTTTTTTTTTTTT..........................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
....................................................ATTTTTTTTTTTTTTTTT.............................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
........................................................ATTTTTTTTTTTTTTTTT.........................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
.........................................................ATTTTTTTTTTTTTTTTT........................................................................................	18	47	0.04	0.00	0.04	0.00	0.00
....................TCTTTTTT---------------T--------GTTTTTTTTTTTTTTTTTTTTTTC---------------------------------......................................................	33	1	1.00	0.00	0.00	0.00	1.00
.........................TTT---------------T--------TTCTTTTTTTTTTTTTTTT............................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
....................................................GATTTTTTTTTTTTTTTTTG...........................................................................................	20	10	0.10	0.00	0.00	0.10	0.00
...............................................................................................................................................TGCAGAAACCATGAAGGC..	18	1	1.00	0.00	0.00	1.00	0.00
.......................................................ATTTTTTTTTTTTTTTTTT.........................................................................................	19	40	0.03	0.00	0.03	0.00	0.00
...........................T---------------T--------TTTTCTTTTTTTTTTTTTTTT..........................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
.....................TTTTTTC---------------T--------TTTTTTTTTTTTTTT................................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
...........................................T--------TTTTTCTTTTTTTTTTTTTTTT.........................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
......................................................TTCTTTTGTTTTTTTTTTTTT........................................................................................	21	33	0.03	0.00	0.00	0.00	0.03
...................TTTTTTTTT---------------T--------TTTTTTTTTTTTTTTTTTTTTT.........................................................................................	32	16	0.06	0.00	0.00	0.00	0.06
................................................................................................................................................GCAGATACCATGAAGGC..	17	1	1.00	0.00	0.00	1.00	0.00
......................................................TTTTCTTATTTTTTTTTTTTTC---------------------------------ACA...................................................	25	1	1.00	0.00	0.00	0.00	1.00
......................................................CTTTTTTTTTTTTTTTTT...........................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
........................................................CTTTTTTTTTTTTTTTTT.........................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
........................TTTG---------------T--------GTTTTTTTTTTTTTTTG..............................................................................................	22	8	0.13	0.13	0.00	0.00	0.00
........................................................TTTTTTTTTTTTTCTTTTT........................................................................................	19	34	0.03	0.03	0.00	0.00	0.00
....................TTTTTTTT---------------T--------TTTTTTTTTTTTTTTTCTTTT..........................................................................................	30	16	0.06	0.00	0.00	0.00	0.06
......................................................TTTTTTTTTTTTTCTTTTT..........................................................................................	19	34	0.03	0.03	0.00	0.00	0.00
......................................................TTTTTTTATTTCTTTTTTTTT........................................................................................	21	25	0.04	0.00	0.00	0.00	0.04
.....................TTTTTTT---------------T--------GTTTTTTTTTTTTTTTCT.............................................................................................	26	8	0.13	0.00	0.00	0.00	0.13
........................................................ATTTTTTTTTTTTTTTTTT........................................................................................	19	40	0.03	0.00	0.03	0.00	0.00
.....................................................TTTTTTTTTTTTTCTTTTT...........................................................................................	19	34	0.03	0.03	0.00	0.00	0.00
.....................................................TTTTTTTATTTCTTTTTTTTT.........................................................................................	21	25	0.04	0.00	0.00	0.00	0.04
........................TTTT---------------T--------TCTTTTTTTTTTTTTTTT.............................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
......................ATTTTT---------------T--------GTTTTTTTTTTTTTTT...............................................................................................	23	22	0.05	0.00	0.00	0.00	0.05
......................TTTTTT---------------T--------ATTTCTTTTTTTTT.................................................................................................	21	25	0.04	0.00	0.00	0.00	0.04
......................................................ATTTTTTTTTTTTTTTTTT..........................................................................................	19	40	0.03	0.00	0.03	0.00	0.00
.........................................................................................................................G-----------------ATTTTGCTGAAACCACCA......	19	1	1.00	0.00	0.00	0.00	1.00
......................TTTTTT---------------T--------TTTTTTTTTTTTTTTTTTCTTTT........................................................................................	30	16	0.06	0.00	0.00	0.00	0.06
......................TTCTTT---------------T--------GTTTTTTTTTTTTT.................................................................................................	21	33	0.03	0.00	0.00	0.00	0.03
.....................TTTTTTT---------------T--------TTTTTTTTTTTTTTTTTCTTTT.........................................................................................	30	16	0.06	0.00	0.00	0.00	0.06
.......................................................CTTTTTTTTTTTTTTTTT..........................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
...............................................................................................................................................TGCAGAAACCACGAAAGG..	18	1	1.00	0.00	0.00	1.00	0.00
.........................TTT---------------T--------GTTTTTTCTTTGTTTTT..............................................................................................	21	3	0.33	0.00	0.33	0.00	0.00
......................TTTTTT---------------C--------TTTTTTTTTTTTTTTT...............................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
....................................................GTTATTTTTCTTTTTTTT.............................................................................................	18	5	0.20	0.00	0.00	0.20	0.00
................TGAGTTTTTTCC---------------T--------GTTTTTTTTT.....................................................................................................	23	1	1.00	0.00	0.00	0.00	1.00
.......................TTTTT---------------T--------CTTTTTTTTTTTTTTTT..............................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
....................................................ATTTTTTGTTTTTTTTTTTTTTT........................................................................................	23	22	0.05	0.00	0.00	0.00	0.05
.....................................................TTTTTTCTTTTTTTTTTTTTTTT---------------------------------......................................................	23	51	0.02	0.00	0.02	0.00	0.00
.....................TTTTTTT---------------T--------TTTTTTTTTTTTTTTTTTTTTTTT---------------------------------......................................................	32	16	0.06	0.00	0.00	0.00	0.06
.......................TCTTT---------------T--------GTTTTTTTTCTTTTTT...............................................................................................	22	3	0.33	0.00	0.00	0.33	0.00
.........................................................CTTTTTTTTTTTTTTTTT........................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
...........................T---------------T--------CTTTTGTTTTTTTTTTTTT............................................................................................	21	33	0.03	0.00	0.00	0.00	0.03
....................TTTTTTCT---------------T--------TTTTTTTTTTTTTT.................................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
..........................TT---------------T--------TTTCTTTTTTTTTTTTTTTT...........................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
..........................TT---------------T--------GTGTTTTTTTTTTTTTTTG............................................................................................	22	8	0.13	0.13	0.00	0.00	0.00
.......................................................TTTTTTTTTTTTTCTTTTT.........................................................................................	19	34	0.03	0.03	0.00	0.00	0.00
....................................................TTTTTTCTTTTTTTTTTTTTTTT........................................................................................	23	51	0.02	0.00	0.02	0.00	0.00
.....................................................CTTTTTTTTTTTTTTTTT............................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
.....................................................ATTTTTTTTTTTTTTTTTT...........................................................................................	19	40	0.03	0.00	0.03	0.00	0.00
...............................................................................................................................................TGCAGAAACCATGAAGGCC.	19	1	1.00	0.00	1.00	0.00	0.00
....................TTTTTTTT---------------T--------TTTTTTTTTTTTTTTTTTTTTTT........................................................................................	32	16	0.06	0.00	0.00	0.00	0.06
....................................................CTTTTTTTTTTTTTTTTT.............................................................................................	18	45	0.02	0.00	0.00	0.02	0.00
.....................TTTTTTT---------------T--------TTTTTTTTTTTTTTTTTTTTTTTT---------------------------------ACA...................................................	35	1	1.00	0.00	0.00	0.00	1.00
....................................................ATTTTTTTTTTTTTTTTTT............................................................................................	19	40	0.03	0.00	0.03	0.00	0.00
....................ATTTTTTT---------------T--------TTTTTTTTTTTTTTTTTTTTTTTC---------------------------------A.....................................................	34	1	1.00	0.00	0.00	0.00	1.00
.....................................................TTCTTTTGTTTTTTTTTTTTT.........................................................................................	21	33	0.03	0.00	0.00	0.00	0.03

dp4

CTGTCTCACTTTGTGGTAGATTCTAATGCTTAT---------AATAA-----CTTATAATTTCTTCATCATTTATC---------------------------------GCGTCT-----------------------GGTTTTTCAGAAGCGGCCAAGTCGC	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...........................................................................C---------------------------------GTGTCT-----------------------GGTTTTTCAGT..............	18	1	1.00	0.00	1.00	0.00	0.00
...........TGTGGTAxATTCTAGTGCT.....................................................................................................................................	18	1	1.00	0.00	1.00	0.00	0.00

droPer1

CTGTCTCACTTTGTGGTAGATTCTAATGCTTAT---------AA--------CTTATAATTTCTTCATCATTTATC---------------------------------GCGTCT-----------------------GGTTTTTCAGAAGCGGCCAAGTCGC

Size

Hit Count

Total Norm

V111
Male body

V042
Embryo

V050
Head

V057
Head

M021
Embryo

droWil1

ATGGCACATTTTATCGTAAGTTAATTTCAA---AAGGTTTTCTT-GC------------------------------------------------------------------------CAACTTAATGACAAATTTTTTGAATGCAGAAACCCAGGAGTCGC	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...............................................................................................................................TGAGAAATTTTTTGAATT..................	18	1	1.00	0.00	1.00	0.00	0.00
...............GTAAGTGAATTTCAA---ACGGTT............................................................................................................................	21	1	1.00	0.00	1.00	0.00	0.00

droVir3

GTGGCGCATTTTGTGGTTGGCATTT---G----------------------------------TTTTACACTTGTCGCATGTTCTATAATACTCTAC------------------------------------------ATATTTTAGAAACCGAGGATACGG

Size

Hit Count

Total Norm

V116
Male body

V053
Unknown

V047
Embryo

M027
Male body

M028
Head

droMoj3

TTGGGACACTTTGTGGTAAATGACATGCGAGGC---------TTCTCAACTTGCTCAAT--------CCATTTAAC------------TTATTCTGT------------------------------------------ATCTTGTAGAAATCGCCAACACGT	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
TTGGGCCACTTTxTGGTAA................................................................................................................................................	18	1	1.00	0.00	0.00	0.00	1.00

droGri2

CTGTCGCACTTTGTGGTAAGCAAAC---AA---GCAATATT--------------------------------ATTGTGTGATTAAAAAAACGAAATATTGTTACTATCAAATCT--------------TCGTTTTCTATCGATCTAGAAACAACGAACTCGC	Size	Hit Count	Total Norm	V109 Male body
......CACTTTxTGGTAAGCAGAC---.......................................................................................................................................	18	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image