ID:

hsa-mir-16-2

 Coordinate:

chr3:160404745-160404825 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-35.7 -35.7 -35.7
mature
  1. has_463  chr13:50049027-50049048 -
  2. has_1326  chr3:160404754-160404775 +
star

Sense Strand Reads

TGTTTTCATCATCAGATGTTCGTTTTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATATTAAACACCAATATTACTGTGCTGCTTTAGTGTGACAGGGATACAGCAACTATTTTATCAATTGTTTGTATTTCCCTTTAAGGTAA
********************************************...((((((.((((..(((((((((..((((((((.((.................)).))))))))..)))))))))..)))).))))))....******************************************* 		Read size # Mismatch Hit Count Total Norm Total TAX577738
breast		 SRR095854
brain		 SRR139217
thymus		 SRR139216
thymus		 SRR039625
liver		 SRR139186
lung		 SRR330919
skin		 SRR139215
thymus		 SRR330923
skin		 TAX577743
breast		 SRR139205
spleen		 TAX577744
breast		 SRR139185
lung		 SRR330915
skin		 SRR139214
thymus		 TAX577745
breast		 SRR139173
kidney		 SRR139211
testes		 SRR330921
skin		 SRR139204
spleen		 SRR139210
testes		 SRR139167
heart		 SRR139174
kidney		 SRR139184
lung		 SRR139166
heart		 SRR330916
skin		 SRR039624
liver		 TAX577739
breast		 TAX577589
breast		 SRR039620
liver		 SRR342896
heart		 TAX577741
breast		 SRR342897
heart		 SRR139179
liver		 SRR139194
ovary		 SRR330922
skin		 SRR139203
spleen		 TAX577740
breast		 TAX577579
breast		 SRR040028
cervix		 SRR139180
liver		 SRR342898
heart		 SRR342901
heart		 SRR342895
heart		 SRR342900
heart		 SRR139183
lung		 SRR139171
kidney		 SRR553574
heart		 SRR039622
liver		 SRR139209
testes		 SRR039191
blood		 SRR094129
uterus		 SRR039621
liver		 SRR342894
heart		 SRR094130
uterus		 SRR039612
liver		 SRR094131
uterus		 TAX577590
breast		 SRR553575
Kidney		 SRR040010
cervix		 SRR139202
spleen		 SRR139193
ovary		 SRR039623
liver		 SRR330908
skin		 SRR039619
liver		 SRR139165
heart		 SRR330913
skin		 SRR191602
breast		 SRR139172
kidney		 SRR330906
skin		 SRR342899
heart		 SRR191601
breast		 SRR330907
skin		 SRR330920
skin		 SRR330905
skin		 SRR139208
testes		 SRR330904
skin		 SRR139164
heart		 SRR039613
liver		 RoviraIPAgo2
breast		 SRR094132
uterus		 SRR363673
fibroblast		 SRR139192
ovary		 SRR139191
ovary		 SRR330911
skin		 SRR330914
skin		 SRR191603
breast		 TAX577588
breast		 TAX577746
breast		 SRR553576
testes		 SRR139178
liver		 SRR330917
skin		 SRR363674
fibroblast		 SRR139177
liver		 SRR191605
breast		 SRR191597
breast		 SRR191566
breast		 SRR039618
liver		 SRR040018
cervix		 SRR139219
thymus		 SRR039617
liver		 SRR191598
breast		 SRR191631
breast		 SRR191622
breast		 TAX577580
breast		 SRR330912
skin		 SRR040036
cervix		 SRR191593
breast		 SRR039190
blood		 SRR191624
breast		 SRR191590
breast		 SRR553572
frontal-cortex		 TAX577742
breast		 TAX577453
breast		 GSM450600
brain		 SRR191629
breast		 SRR191620
breast		 SRR191625
breast		 SRR139190
lung		 SRR191621
breast		 GSM450608
brain		 SRR139218
thymus		 GSM450597
brain		 SRR191557
breast		 SRR191565
breast		 SRR039611
liver		 SRR191434
breast		 GSM450603
brain		 SRR330910
skin		 SRR191595
breast		 SRR191559
breast		 SRR039616
liver		 SRR191406
breast		 GSM450607
brain		 SRR139168
brain		 SRR191592
breast		 SRR139195
ovary		 SRR191578
breast		 SRR191626
breast		 GSM450605
brain		 SRR191564
breast		 SRR040014
cervix		 SRR191635
breast		 SRR139162
brain		 SRR363675
fibroblast		 SRR191438
breast		 SRR139189
lung		 SRR191563
breast		 SRR191415
breast		 GSM450610
brain		 SRR363676
fibroblast		 SRR191615
breast		 SRR191422
breast		 SRR191585
breast		 SRR040024
cervix		 GSM450609
brain		 SRR330909
skin		 SRR191591
breast		 SRR039615
liver		 GSM450606
brain		 SRR191588
breast		 GSM450598
brain		 SRR191589
breast		 SRR191604
breast		 SRR139175
kidney		 SRR553573
cerebellum		 SRR037876
fibroblast		 SRR191410
breast		 SRR015447
breast		 SRR191459
breast		 SRR191560
breast		 SRR191586
breast		 GSM450604
brain		 SRR040032
cervix		 SRR040022
cervix		 SRR191460
breast		 SRR191600
breast		 SRR139169
heart		 SRR191409
breast		 SRR040016
cervix		 SRR191633
breast		 GSM450602
brain		 GSM450601
brain		 SRR139176
kidney		 SRR191632
breast		 SRR040012
cervix		 SRR040030
cervix		 SRR191596
breast		 SRR191414
breast		 GSM450599
brain		 SRR191404
breast		 SRR191587
breast		 SRR191420
breast		 SRR191570
breast		 SRR191618
breast		 SRR191607
breast		 SRR191551
breast		 SRR139207
spleen		 SRR191623
breast		 SRR191442
breast		 SRR191568
breast		 SRR139206
spleen		 SRR191545
breast		 SRR191461
breast		 SRR191614
breast		 SRR139212
testes		 SRR191402
breast		 SRR040038
cervix		 SRR191412
breast		 SRR191599
breast		 SRR039614
liver		 SRR191487
breast		 SRR191421
breast		 SRR191430
breast		 SRR191617
breast		 SRR191556
breast		 SRR191619
breast		 SRR191517
breast		 SRR191433
breast		 SRR191416
breast		 SRR191573
breast		 SRR191456
breast		 SRR191482
breast		 SRR191562
breast		 SRR191423
breast		 SRR191443
breast		 SRR191628
breast		 SRR191608
breast		 SRR191627
breast		 SRR191454
breast		 SRR191439
breast		 SRR191505
breast		 SRR191393
breast		 SRR191408
breast		 SRR191455
breast		 SRR191399
breast		 SRR191576
breast		 SRR191485
breast		 SRR191546
breast		 SRR139170
heart		 SRR191611
breast		 SRR191444
breast		 SRR191417
breast		 SRR191612
breast		 GSM532885
cervix		 SRR191469
breast		 SRR015448
breast		 SRR191571
breast		 SRR191451
breast		 SRR191522
breast		 SRR191483
breast		 GSM532871
cervix		 SRR191425
breast		 SRR191397
breast		 SRR191502
breast		 SRR191508
breast		 SRR191432
breast		 SRR191499
breast		 SRR191569
breast		 SRR191401
breast		 SRR139201
placenta		 SRR191606
breast		 SRR191435
breast		 SRR191471
breast		 SRR040006
cervix		 SRR191413
breast		 SRR191558
breast		 SRR139197
ovary		 SRR191452
breast		 SRR191479
breast		 SRR191428
breast		 SRR191405
breast		 SRR191519
breast		 SRR191466
breast		 SRR191577
breast		 SRR191518
breast		 SRR191575
breast		 SRR191464
breast		 SRR191475
breast		 SRR139200
placenta		 SRR191521
breast		 SRR191548
breast		 SRR191574
breast		 SRR191436
breast		 SRR191509
breast		 SRR191465
breast		 SRR191610
breast		 GSM532883
cervix		 SRR191472
breast		 SRR191541
breast		 SRR191492
breast		 SRR191403
breast		 SRR191547
breast		 SRR191418
breast		 SRR191445
breast		 SRR191394
breast		 SRR191503
breast		 SRR191486
breast		 SRR040008
cervix		 SRR191609
breast		 SRR139182
liver		 SRR191473
breast		 SRR139181
liver		 SRR191542
breast		 SRR139188
lung		 SRR191426
breast		 SRR191463
breast		 SRR191538
breast		 SRR191523
breast		 SRR191510
breast		 SRR191524
breast		 SRR191491
breast		 SRR191481
breast		 SRR191500
breast		 SRR015446
breast		 SRR191468
breast		 SRR191507
breast		 SRR444061
skin		 SRR191431
breast		 SRR191530
breast		 SRR191525
breast		 SRR191582
breast		 SRR139196
ovary		 SRR191497
breast		 SRR191453
breast		 SRR191470
breast		 SRR191446
breast		 SRR191552
breast		 SRR191449
breast		 SRR191504
breast		 SRR444048
skin		 SRR191427
breast		 SRR191495
breast		 SRR191477
breast		 SRR191478
breast		 SRR191407
breast		 SRR191474
breast		 SRR191554
breast		 SRR191441
breast		 SRR191400
breast		 SRR191540
breast		 SRR191567
breast		 SRR191447
breast		 SRR191458
breast		 SRR191543
breast		 SRR191462
breast		 SRR444050
skin		 SRR191581
breast		 SRR191480
breast		 SRR040040
cervix		 SRR139198
placenta		 GSM532875
cervix		 SRR191544
breast		 SRR191555
breast		 SRR191396
breast		 SRR191494
breast		 SRR444060
skin		 SRR139187
lung		 SRR191535
breast		 SRR040026
cervix		 SRR191411
breast		 SRR191549
breast		 SRR191514
breast		 SRR191429
breast		 GSM532929
cervix		 SRR191467
breast		 SRR330918
skin		 SRR191536
breast		 SRR191506
breast		 SRR191489
breast		 SRR139199
placenta		 SRR191511
breast		 SRR040042
cervix		 SRR191398
breast		 SRR191572
breast		 SRR444051
skin		 SRR191531
breast		 SRR191594
breast		 SRR191537
breast		 GSM532877
cervix		 SRR191613
breast		 SRR191527
breast		 SRR444045
skin		 SRR191526
breast		 SRR191630
breast		 SRR191440
breast		 SRR191512
breast		 SRR191515
breast		 SRR191550
breast		 SRR191579
breast		 SRR191580
breast		 SRR191553
breast		 SRR040034
cervix		 SRR191532
breast		 SRR040020
cervix		 SRR191488
breast		 SRR191520
breast		 SRR191534
breast		 SRR191561
breast		 SRR191419
breast		 SRR191496
breast		 SRR191498
breast		 SRR191539
breast		 GSM532879
cervix		 SRR191448
breast		 SRR191457
breast		 SRR191528
breast		 SRR191516
breast		 SRR191533
breast		 SRR191476
breast		 SRR191395
breast		 SRR191493
breast		 SRR191584
breast		 SRR191616
breast		 SRR191529
breast		 SRR191583
breast		 SRR191637
breast		 SRR191501
breast		 GSM532887
cervix		 SRR191450
breast		 SRR139213
testes		 SRR191484
breast		 SRR191513
breast		 SRR191634
breast		 SRR191424
breast		 SRR191437
breast		 SRR444043
skin		 GSM532873
cervix
...........................................................TAGCAGCACGTAAATATTGGCG.................................................................................................... 22 0 2 564266.50 1128533 117313 107 42832 13810 25520 25292 33699 13420 28189 24422 17268 20860 16290 25348 3086 23948 12774 12272 17477 7500 12782 10558 11752 5428 9424 15002 7205 13201 13769 6557 11953 11960 11509 8474 6986 11097 4122 10410 11611 7330 7616 9568 10013 9824 9478 3034 3166 8398 4567 2734 9991 559 4179 6828 925 3417 960 8988 7310 4964 1698 2052 3532 7042 4626 2702 7486 6570 2936 6933 6410 7358 5629 5962 7343 2446 5363 1628 2675 4448 401 6226 1478 370 4851 4880 4450 5041 4399 3720 1640 4178 5277 1872 3789 3564 3818 2163 814 0 2208 3326 3387 2991 2744 2814 121 3258 2725 2978 2607 2197 2456 2605 2702 2485 2409 2614 0 1837 2474 24 1592 2365 2002 1390 1713 2164 1767 1997 1765 1242 1706 1685 0 1703 50 1449 1659 1763 1499 954 1522 36 1755 1431 22 1587 1396 1656 1843 1582 1335 1549 251 1507 1088 1250 1174 1345 1205 1265 1159 1257 28 1152 956 1016 1230 1143 1178 1173 1286 152 397 1012 805 20 943 194 907 970 920 0 919 326 166 986 695 957 858 914 794 625 852 661 612 0 723 628 588 10 623 567 473 0 514 21 428 555 412 768 547 410 360 524 432 621 505 462 404 389 370 553 500 426 225 393 313 327 448 485 317 367 364 279 327 424 474 0 261 339 345 265 106 266 321 289 309 395 423 238 357 226 393 363 295 333 289 227 4 232 303 229 119 206 249 0 270 201 266 171 302 228 238 247 128 194 218 0 290 190 185 225 258 173 193 89 170 254 235 168 206 191 187 161 256 176 57 171 0 128 8 174 0 160 152 197 193 132 192 199 108 146 140 125 191 23 145 126 160 62 2 149 102 91 109 137 106 161 56 123 137 96 97 75 104 17 72 82 129 80 99 64 99 88 6 76 74 4 0 57 94 80 62 83 2 0 71 20 46 15 73 42 20 45 44 58 79 72 0 61 0 51 6 18 45 31 47 27 6 32 6 34 32 24 28 29 23 11 9 9 1 22 15 14 19 6 7 10 26 14 11 0 12 10 15 5 16 8 2 8 4 5 3 7 6 3 0 6 0 7 2 6 1 2 0 1
...........................................................TAGCAGCACGTAAATAT......................................................................................................... 17 0 2 117113.50 234227 117 0 18384 15938 0 16320 4 14236 2 47 10192 25 10366 2 9018 14 7588 8040 3 7860 8076 7104 7400 8624 6256 3 0 8 17 0 5 21 8 4898 5278 5 6100 15 14 0 4018 4 3 8 4 5684 5568 22 0 4582 0 131 0 11 101 0 107 22 0 0 4390 2810 0 2 0 3990 0 0 4574 1 2 1 0 3 0 4056 1 2968 0 8 52 6 2894 1960 0 0 1 5 5 1 2502 2 4 1434 1 0 0 0 0 1106 0 0 0 0 5 1 0 0 0 1 0 0 4 3 6 1 0 0 1090 1 5 1212 0 0 1 0 0 4 1 1 0 0 1 2 714 0 574 0 0 1 0 0 0 1092 4 0 792 1 1 4 1 0 0 1 0 2 0 0 0 0 3 3 3 0 994 1 0 0 1 0 0 0 0 0 0 0 0 694 0 0 1 1 3 424 0 0 0 0 0 1 0 0 0 1 0 0 0 228 0 0 0 468 0 0 0 352 0 0 1 0 0 0 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 152 0 0 0 0 3 0 1 0 1 0 0 2 0 0 0 0 0 0 0 2 30 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 110 0 38 0 32 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0
...........................................................TAGCAGCACGTAAATATTGGC..................................................................................................... 21 0 2 104328.50 208657 3099 17 3512 6782 16603 2864 3426 1872 2426 1260 2106 1746 2636 1974 4488 1252 3188 1754 1781 3754 1690 1810 2302 826 1748 1222 5370 741 1044 5421 2336 1037 2323 1072 1432 1338 820 716 804 5122 1130 1944 2038 1520 1711 944 2090 1138 4582 852 265 1426 3697 1248 1660 3712 1930 530 948 3169 1544 1810 3591 890 2783 784 701 724 1002 667 1372 552 683 706 585 530 594 524 2475 1616 712 534 384 992 470 576 667 273 280 1160 582 667 464 372 415 486 673 1183 3280 78 1066 356 288 465 225 298 196 190 90 199 686 416 182 203 75 215 259 218 38 427 174 170 45 168 493 734 122 70 245 535 319 687 228 54 24 143 132 148 133 57 143 851 193 144 156 183 126 170 200 36 147 23 86 89 1324 47 138 42 309 46 395 40 181 211 50 144 65 128 23 49 119 157 31 1229 865 117 223 116 133 889 143 25 36 26 73 559 884 194 142 15 87 95 76 134 53 27 74 8 6 85 73 38 0 45 37 10 62 35 54 82 136 0 14 74 59 63 178 0 17 84 54 28 18 65 30 18 131 14 39 68 31 0 47 32 33 51 29 19 0 16 77 67 75 0 261 24 17 22 37 1 0 123 15 28 1 0 24 0 32 47 4 26 24 29 119 12 57 8 25 12 26 45 0 18 13 12 40 23 9 0 0 17 46 17 9 15 18 159 22 0 2 40 5 27 31 22 1 11 155 13 16 3 38 7 0 17 13 8 9 17 0 0 9 0 6 2 3 155 17 16 0 23 12 8 9 13 32 18 1 13 75 9 0 9 9 15 4 1 2 11 1 1 7 2 0 9 111 12 6 5 0 28 0 10 4 9 78 0 0 56 6 0 4 0 27 2 11 0 0 0 0 1 9 3 0 49 8 7 0 9 0 2 30 4 1 1 0 0 2 4 1 3 2 2 5 0 0 0 5 1 1 0 0 0 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0
...........................................................TAGCAGCACGTAAATATTGG...................................................................................................... 20 0 2 92713.50 185427 4377 10 5604 5944 8906 4756 9532 2708 7859 1265 3830 1086 2502 7001 3500 648 1684 2266 5315 3338 1922 1328 1324 1202 1140 3444 2846 388 855 3112 2334 658 2182 788 1400 2377 1530 448 423 474 530 1661 1317 1731 1546 554 964 2397 2614 726 216 1857 1768 2043 1845 2039 2114 521 1660 287 1524 1022 2135 1617 1314 522 1444 481 678 1735 898 349 1183 1190 1135 458 1112 500 1251 582 882 165 400 628 1007 681 287 220 200 902 220 910 167 238 224 243 379 642 302 166 577 451 162 126 106 435 25 107 24 56 229 648 113 121 68 222 146 89 40 172 186 140 33 61 179 260 55 56 445 193 185 307 207 29 88 132 98 385 85 52 193 98 95 98 70 34 58 73 72 25 47 185 29 20 146 34 521 33 126 20 92 25 144 106 32 238 11 77 10 42 170 77 35 130 80 55 53 92 120 125 111 30 21 16 62 42 108 15 38 14 61 24 32 67 16 18 87 34 35 57 54 40 5 26 41 14 14 6 65 62 51 22 18 47 137 35 25 24 38 24 30 49 28 14 30 44 11 1 2 23 23 7 27 46 38 21 42 20 12 56 9 22 23 25 52 10 9 15 60 33 20 17 12 16 11 17 15 15 10 13 16 53 10 16 72 22 37 6 18 4 22 35 30 10 20 9 19 27 14 6 20 50 10 17 10 20 16 16 5 6 6 5 11 9 4 24 12 33 20 3 30 6 20 19 4 11 5 8 16 29 9 11 2 6 1 13 2 4 20 6 14 24 26 8 57 9 3 6 7 2 7 6 7 3 2 8 4 1 4 6 3 1 2 3 6 5 0 13 1 3 0 1 1 3 2 12 5 0 3 29 14 2 3 2 0 7 4 0 3 2 2 3 0 0 2 4 0 4 3 0 1 4 0 2 2 4 1 4 3 1 3 1 0 5 3 1 0 0 9 4 1 4 2 0 1 4 3 1 0 0 0 0 0 0 4 1 1 1 0 0 0 1 0 0 1 0 0 0
...........................................................TAGCAGCACGTAAATATTGGCGT................................................................................................... 23 0 2 84577.50 169155 3674 16 3950 3862 4159 3376 2304 1652 2668 3128 3020 4304 2166 1659 1102 4116 3536 2208 2089 1912 2630 2634 2268 1042 2346 1540 2108 2367 1252 1016 1754 1958 1456 2108 1102 1772 1004 1972 1783 782 2026 1882 1606 1302 1698 534 1330 929 471 750 1862 201 965 1073 163 558 163 631 1012 522 592 642 545 1154 851 998 829 1493 690 633 1006 1030 1185 1083 262 776 876 668 449 528 85 1014 312 154 723 771 881 553 647 650 582 577 772 684 726 906 372 376 54 0 278 426 631 786 609 614 14 427 688 569 196 262 459 418 624 274 561 344 0 562 184 0 971 402 263 252 564 434 354 223 278 150 262 677 0 313 4 64 345 339 192 78 312 14 257 348 0 305 248 237 255 140 350 365 5 235 172 387 275 466 137 410 172 242 4 87 250 238 445 162 101 274 206 5 22 226 351 0 114 14 195 196 152 0 196 38 14 71 211 197 74 120 163 77 140 198 102 0 164 92 55 0 230 116 65 0 116 2 66 69 95 70 124 162 58 87 111 104 73 78 74 91 32 43 58 80 118 102 133 134 41 144 68 47 66 96 39 88 56 0 142 56 38 80 2 80 37 68 19 48 52 18 40 56 53 73 33 64 25 73 6 50 33 20 6 53 47 0 38 48 40 47 45 33 34 86 65 18 20 2 38 25 25 38 65 36 57 12 30 42 55 27 55 22 28 23 28 55 2 88 0 30 6 52 0 43 22 32 26 61 39 32 32 71 27 10 42 0 9 64 33 45 0 28 8 26 33 9 26 21 0 25 38 19 17 12 8 2 49 19 19 19 16 38 17 18 0 12 10 0 0 4 18 22 16 22 0 0 24 1 12 1 11 26 4 9 0 26 4 7 2 15 0 6 2 0 7 7 7 7 0 10 0 5 6 2 6 5 3 6 0 3 0 1 1 8 11 16 1 1 2 1 2 0 2 1 0 8 3 5 1 2 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................CTAGCAGCACGTAAATATTGGCG.................................................................................................... 23 0 1 39499.00 39499 140 38358 2 0 34 0 6 0 6 34 0 11 0 2 0 28 0 1 3 0 0 0 0 0 0 4 5 8 9 17 1 5 0 0 0 3 0 12 5 1 0 3 2 2 0 0 0 3 7 0 5 0 4 2 0 6 6 9 3 1 0 0 5 4 15 0 3 34 0 3 0 33 0 1 1 0 0 1 3 52 1 0 0 0 0 1 21 3 5 0 0 0 0 0 19 18 18 5 1 0 2 18 6 5 0 2 0 18 0 6 7 0 1 2 5 2 4 7 0 7 1 0 1 17 7 0 1 1 1 4 9 2 19 1 0 10 0 12 4 0 7 0 1 0 0 1 0 7 12 0 0 4 4 6 0 1 0 9 7 1 3 1 5 3 0 0 2 10 0 1 7 4 0 0 0 0 2 0 5 0 0 0 0 0 3 1 0 11 8 1 12 2 2 5 1 0 2 0 2 0 14 0 1 1 2 0 5 0 4 3 0 0 0 1 0 4 1 0 0 3 7 0 1 5 0 1 0 0 1 0 1 0 8 4 0 7 7 0 0 0 1 1 3 2 0 0 0 11 0 1 0 0 0 5 0 0 0 0 5 3 0 2 0 0 0 5 1 0 0 0 0 0 1 0 7 0 3 0 0 0 0 1 2 0 0 0 1 2 0 0 0 4 0 4 1 5 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TAGCAGCACGTAAATATTGGCGA................................................................................................... 23 1 2 36758.50 73517 3716 15 0 0 2048 0 1874 0 1475 2881 0 4545 0 1094 0 2148 0 0 1562 0 0 0 0 0 0 810 1036 1402 1192 892 989 2064 1101 0 0 1313 0 1255 1144 306 0 1010 818 771 773 0 0 597 548 0 941 168 807 695 187 605 181 560 681 385 0 0 426 805 388 0 683 710 0 502 669 345 823 690 232 0 664 0 449 89 107 276 0 0 425 480 581 523 769 206 0 454 205 0 293 290 204 371 50 0 291 237 271 233 449 375 6 247 102 336 246 202 430 332 216 364 163 268 0 370 106 0 219 174 201 382 311 260 233 105 254 139 101 210 0 155 0 98 140 187 183 43 184 0 77 77 0 78 114 153 81 76 97 26 10 149 100 256 157 113 140 90 156 97 0 150 140 123 51 89 86 61 122 14 19 67 232 0 90 22 123 108 89 0 112 52 9 56 112 100 54 76 50 46 41 72 117 0 76 40 47 0 1 45 45 0 38 1 51 51 105 0 32 42 137 38 34 0 43 52 46 22 28 34 37 17 147 17 110 44 23 0 23 24 23 30 21 11 1 0 43 29 47 79 1 13 12 21 16 3 1 10 20 32 3 4 34 8 12 15 0 26 13 14 3 39 27 0 23 21 12 38 7 10 14 1 26 8 15 0 8 25 11 18 4 3 9 3 7 0 7 18 1 13 13 11 3 5 2 4 0 25 0 5 0 12 8 3 2 15 1 0 20 4 11 5 1 0 15 6 2 53 0 5 6 6 5 11 21 0 1 3 2 9 11 6 8 3 19 7 0 9 9 22 1 0 1 7 1 1 0 5 0 1 8 2 0 0 1 0 7 0 4 6 5 0 1 0 3 0 0 0 0 3 0 0 0 6 0 4 2 0 0 0 0 2 0 1 0 11 1 2 0 0 6 3 0 0 0 3 0 1 3 0 1 1 0 0 0 2 2 0 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0
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.....................................................................................................ACCAATATTACTGTGCTGCT............................................................ 20 0 1 23617.00 23617 80 0 1392 2136 33 1206 218 1576 207 13 531 2 906 272 2096 3 48 783 108 440 114 468 49 1197 535 118 8 1 3 21 14 6 12 224 454 48 497 3 3 104 176 8 11 22 15 804 68 31 16 851 3 68 13 18 41 8 72 5 22 160 355 478 12 26 1 493 51 13 56 82 5 11 23 16 131 109 20 467 11 26 61 0 409 547 24 4 6 7 3 11 219 11 1 202 5 10 31 4 23 41 17 16 3 1 2 5 8 8 1 0 57 0 1 3 3 5 4 0 14 1 2 47 2 2 12 2 0 2 6 7 5 20 24 0 1 1 152 59 1 1 8 11 0 4 0 1 28 1 0 1 0 31 2 0 9 0 6 5 7 1 1 0 3 5 4 0 2 8 1 0 3 1 0 3 4 1 2 16 19 8 2 0 0 2 5 0 3 6 2 0 9 4 2 15 0 0 3 11 1 0 3 0 2 0 13 1 0 7 7 4 0 0 0 0 0 0 1 0 0 0 4 4 3 2 4 1 2 1 1 0 1 2 7 7 1 1 6 0 0 12 2 0 3 15 12 1 8 2 2 1 0 1 0 2 0 0 2 2 7 2 4 2 0 0 11 11 1 11 3 0 0 4 2 0 3 0 2 0 1 7 1 7 2 0 0 0 1 0 0 0 1 1 1 0 0 4 0 1 0 0 3 0 2 0 0 1 0 1 3 1 1 2 0 0 0 0 0 0 2 0 0 3 59 1 5 0 0 2 0 0 1 0 1 1 0 4 0 55 0 0 0 0 0 2 0 0 0 3 0 3 6 2 1 0 0 0 3 1 1 2 0 37 1 0 0 0 1 0 1 0 1 0 0 1 12 0 0 1 0 0 11 0 2 1 0 2 0 0 3 2 9 5 0 0 0 0 1 0 2 1 0 0 2 0 1 1 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0
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.....................................................................................................ACCAATATTACTGTGCTGCTT........................................................... 21 0 1 15136.00 15136 52 0 1034 1815 67 492 114 1134 102 21 376 7 343 165 1954 6 87 365 52 99 5 269 66 507 64 70 14 13 9 26 20 13 25 134 241 47 426 3 8 163 98 16 10 21 14 304 103 10 29 373 2 67 58 23 61 21 74 9 14 165 39 230 12 37 10 260 35 17 86 51 6 7 26 18 71 4 28 58 15 32 88 3 273 275 26 2 9 6 3 10 91 15 1 159 4 3 5 12 25 64 20 5 4 9 6 7 18 2 21 3 13 1 3 2 4 10 9 5 24 2 3 5 1 2 7 1 4 4 8 3 5 34 32 3 17 6 42 31 4 3 5 32 2 0 0 0 1 1 6 0 0 7 0 3 11 3 7 3 5 4 3 3 1 9 0 0 11 27 6 3 2 5 0 6 11 4 2 2 13 6 2 4 1 5 3 7 4 4 2 2 4 1 2 0 0 14 1 2 4 2 10 0 1 0 27 0 2 10 9 4 1 0 0 1 2 2 5 0 3 0 7 4 1 0 3 1 6 11 9 1 0 2 7 8 1 4 11 1 0 22 10 1 1 17 4 3 20 3 1 3 2 0 0 8 0 1 0 0 2 2 5 1 1 1 8 2 2 4 1 1 1 5 1 1 2 2 4 0 1 3 1 5 6 0 0 1 4 1 1 1 1 2 1 7 0 3 0 2 0 0 3 1 0 2 1 0 1 2 0 0 1 1 1 1 2 0 0 0 0 1 0 1 13 2 2 1 1 0 4 1 2 2 1 1 1 2 0 11 1 3 2 2 1 4 1 1 2 1 2 1 0 0 0 0 0 0 3 0 0 2 2 3 0 2 1 2 1 0 0 0 1 2 0 1 10 0 1 0 0 1 9 3 0 0 0 2 0 1 0 0 3 2 0 0 0 0 0 1 1 2 0 1 0 0 0 3 1 2 0 0 1 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0
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Anti-sense strand reads

ACAAAAGTAGTAGTCTACAAGCAAAATACAAACCTACTTGACTGTATGAACAAGGTGAGATCGTCGTGCATTTATAACCGCATCACTTTATATATAATTTGTGGTTATAATGACACGACGAAATCACACTGTCCCTATGTCGTTGATAAAATAGTTAACAAACATAAAGGGAAATTCCATT
*******************************************...((((((.((((..(((((((((..((((((((.((.................)).))))))))..)))))))))..)))).))))))....******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR040036
cervix		 SRR040038
cervix		 TAX577744
breast		 TAX577743
breast		 TAX577589
breast		 TAX577738
breast		 TAX577741
breast		 SRR040040
cervix		 SRR040010
cervix		 SRR040012
cervix		 TAX577580
breast		 SRR040024
cervix		 SRR039621
liver		 SRR039624
liver		 SRR342894
heart		 SRR040022
cervix		 SRR040014
cervix		 TAX577739
breast		 TAX577579
breast		 SRR094129
uterus		 SRR342899
heart		 SRR040018
cervix		 SRR342900
heart		 SRR094130
uterus		 TAX577745
breast		 SRR342896
heart		 GSM450598
brain		 TAX577590
breast		 SRR040034
cervix		 SRR139165
heart		 SRR139182
liver		 SRR139184
lung		 SRR139195
ovary		 SRR139206
spleen		 SRR139207
spleen		 SRR139208
testes		 SRR139215
thymus		 SRR342901
heart		 TAX577740
breast		 SRR039620
liver		 SRR040030
cervix		 SRR040032
cervix		 SRR330921
skin		 SRR342897
heart		 GSM450600
brain		 SRR040008
cervix		 TAX577746
breast		 GSM450602
brain		 RoviraIPAgo2
breast		 TAX577588
breast		 SRR094131
uterus		 GSM450605
brain		 SRR040016
cervix		 GSM532879
cervix		 SRR191404
breast		 SRR191587
breast		 SRR191598
breast		 SRR191602
breast		 SRR191605
breast		 SRR191629
breast		 SRR330913
skin		 SRR330919
skin		 GSM450609
brain		 SRR094132
uterus		 SRR330922
skin		 TAX577742
breast		 SRR040042
cervix		 SRR342898
heart		 SRR039622
liver		 SRR040006
cervix		 SRR040028
cervix		 SRR191568
breast		 SRR191573
breast		 SRR191621
breast		 SRR330906
skin		 SRR330923
skin		 SRR553575
Kidney		 TAX577453
breast		 SRR191463
breast		 GSM532929
cervix		 SRR095854
brain		 SRR191589
breast		 SRR015446
breast		 GSM450601
brain		 SRR039623
liver		 SRR039617
liver		 SRR039618
liver		 SRR330908
skin		 SRR444045
skin		 GSM450607
brain		 GSM450599
brain		 GSM450597
brain		 GSM450606
brain		 GSM532883
cervix		 SRR039612
liver		 SRR191423
breast
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......................................................................................................GGTTTTAATGACACGACGAT........................................................... 20 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGTTGTAAAGACACGACGAA........................................................... 20 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GTTATAATGACCCGACGAT........................................................... 19 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATGGGTATAAAGACACGACGAA........................................................... 22 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTGGTTATAAAGGCACGGC.............................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GCGGTTATAAAAACACGACGAA........................................................... 22 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGGTTATAATGACACGACGGG........................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGGTTATAATGGCACGACGAT........................................................... 21 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGTCATAAAGACACGACGAA........................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATGGTTATATAGACACGACGAA........................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGGTGATAATGACGCGACGAA........................................................... 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GCGGTTATAAAGAGACGACGAA........................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGGTATAAGGACACGACGAA........................................................... 20 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGGTTATAATGACGCGACGAT........................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GAGGGTATAATGACACGACGAT........................................................... 22 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGTTATTATGGCACGACGAT........................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGGTTATGAAGACACGACGAT........................................................... 22 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGTTATAAAGATACGACGA............................................................ 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
hg38 chr3:160404695-160404875 + hsa-mir-16-2 TGTTTTCATCATCAGA--TGTTCGTT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATATTAAACACCAATATTACTGTGCTGCTTTAGTGTGACAGGGATACAGCAACTATTTTATCAATTGTTTG-TATTTCC----------------------------CTTTAAGGTAA
panTro4 chr3:164188381-164188561 + TGTTTTCATCATCAGT--TGTTCGTT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATGTTAAACACCAATATTACTGTGCTGCTTTAGTGTGACAGGGATACAGCAACTATTTTATCATTTGTTTG-TATTTCC----------------------------CTTTAAGGTAA
rheMac3 chr2:129718959-129719139 - TGTTTTCATCATCAGA--TGTTCATT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATGTATTAAACACCAATATTACTGTGCTGCTTCAGTGTGACAGGGATATAGCAACTATTTTATCCATTGTTTG-TATTTCC----------------------------CTTTAAGGTAA
mm10 chr3:69009863-69010035 + mmu-mir-16-2 TATG-GTACCATCACAGTTG----TA-TTATGTTTGGAT-ATCTGACATGCTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAATATTAAACACCAATATTATTGTGCTGCTTTAGTGTGACAGGGATATAGCAACTCATT-----TCTGTTTGTTATTTCC----------------------------CTTTAAGATAA
rn5 chr2:184967148-184967305 + TATTGTTATCATCACA--CTTGTATTATTATGTTTGGAC--ATTGACATACTTGTTCCGCTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAATATTAAACACCAATATTATTGTGCTGCTTTAGTGTGACAGGGATATAGCAACT-----------------------CC----------------------------CTTTAAGATAA
canFam3 chr34:26460751-26460922 + C--TTTTACCATGAGA--TACTCATT-TTATATTTGGATG-ACTGACGTACTTGTTCCGCTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAAAATTAAACACCAATATTATTGTGCTGCTTTAGCGTGACAGGAATATAACAGCTATTT-----ATTGT--GCTATTCTC----------------------------CTTTAAGATAA
monDom5 Unknown CGT-------------------------------------------CTTGCTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATCAGTCTGAAACCCCAATATTACTGTGCTGCTTTAGTGTGGCAGGCCCACTCCAGCA---------AGGGTTGG-CTTGTCTCTAGTAAGTCAGGACGGTTCTAGGCTTACTTTTACATTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
hg38
TGTTTTCATCATCAGA--TGTTCGTT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATATTAAACACCAATATTACTGTGCTGCTTTAGTGTGACAGGGATACAGCAACTATTTTATCAATTGTTTG-TATTTCC----------------------------CTTTAAGGTAASizeHit CountTotal NormTotalSRR039190
blood		SRR039191
blood		GSM450597
brain		GSM450598
brain		GSM450599
brain		GSM450600
brain		GSM450601
brain		GSM450602
brain		GSM450603
brain		GSM450604
brain		GSM450605
brain		GSM450606
brain		GSM450607
brain		GSM450608
brain		GSM450609
brain		GSM450610
brain		SRR095854
brain		SRR139162
brain		SRR139168
brain		RoviraIPAgo2
breast		SRR015446
breast		SRR015447
breast		SRR015448
breast		SRR191393
breast		SRR191394
breast		SRR191395
breast		SRR191396
breast		SRR191397
breast		SRR191398
breast		SRR191399
breast		SRR191400
breast		SRR191401
breast		SRR191402
breast		SRR191403
breast		SRR191404
breast		SRR191405
breast		SRR191406
breast		SRR191407
breast		SRR191408
breast		SRR191409
breast		SRR191410
breast		SRR191411
breast		SRR191412
breast		SRR191413
breast		SRR191414
breast		SRR191415
breast		SRR191416
breast		SRR191417
breast		SRR191418
breast		SRR191419
breast		SRR191420
breast		SRR191421
breast		SRR191422
breast		SRR191423
breast		SRR191424
breast		SRR191425
breast		SRR191426
breast		SRR191427
breast		SRR191428
breast		SRR191429
breast		SRR191430
breast		SRR191431
breast		SRR191432
breast		SRR191433
breast		SRR191434
breast		SRR191435
breast		SRR191436
breast		SRR191437
breast		SRR191438
breast		SRR191439
breast		SRR191440
breast		SRR191441
breast		SRR191442
breast		SRR191443
breast		SRR191444
breast		SRR191445
breast		SRR191446
breast		SRR191447
breast		SRR191448
breast		SRR191449
breast		SRR191450
breast		SRR191451
breast		SRR191452
breast		SRR191453
breast		SRR191454
breast		SRR191455
breast		SRR191456
breast		SRR191457
breast		SRR191458
breast		SRR191459
breast		SRR191460
breast		SRR191461
breast		SRR191462
breast		SRR191463
breast		SRR191464
breast		SRR191465
breast		SRR191466
breast		SRR191467
breast		SRR191468
breast		SRR191469
breast		SRR191470
breast		SRR191471
breast		SRR191472
breast		SRR191473
breast		SRR191474
breast		SRR191475
breast		SRR191476
breast		SRR191477
breast		SRR191478
breast		SRR191479
breast		SRR191480
breast		SRR191481
breast		SRR191482
breast		SRR191483
breast		SRR191484
breast		SRR191485
breast		SRR191486
breast		SRR191487
breast		SRR191488
breast		SRR191489
breast		SRR191490
breast		SRR191491
breast		SRR191492
breast		SRR191493
breast		SRR191494
breast		SRR191495
breast		SRR191496
breast		SRR191497
breast		SRR191498
breast		SRR191499
breast		SRR191500
breast		SRR191501
breast		SRR191502
breast		SRR191503
breast		SRR191504
breast		SRR191505
breast		SRR191506
breast		SRR191507
breast		SRR191508
breast		SRR191509
breast		SRR191510
breast		SRR191511
breast		SRR191512
breast		SRR191513
breast		SRR191514
breast		SRR191515
breast		SRR191516
breast		SRR191517
breast		SRR191518
breast		SRR191519
breast		SRR191520
breast		SRR191521
breast		SRR191522
breast		SRR191523
breast		SRR191524
breast		SRR191525
breast		SRR191526
breast		SRR191527
breast		SRR191528
breast		SRR191529
breast		SRR191530
breast		SRR191531
breast		SRR191532
breast		SRR191533
breast		SRR191534
breast		SRR191535
breast		SRR191536
breast		SRR191537
breast		SRR191538
breast		SRR191539
breast		SRR191540
breast		SRR191541
breast		SRR191542
breast		SRR191543
breast		SRR191544
breast		SRR191545
breast		SRR191546
breast		SRR191547
breast		SRR191548
breast		SRR191549
breast		SRR191550
breast		SRR191551
breast		SRR191552
breast		SRR191553
breast		SRR191554
breast		SRR191555
breast		SRR191556
breast		SRR191557
breast		SRR191558
breast		SRR191559
breast		SRR191560
breast		SRR191561
breast		SRR191562
breast		SRR191563
breast		SRR191564
breast		SRR191565
breast		SRR191566
breast		SRR191567
breast		SRR191568
breast		SRR191569
breast		SRR191570
breast		SRR191571
breast		SRR191572
breast		SRR191573
breast		SRR191574
breast		SRR191575
breast		SRR191576
breast		SRR191577
breast		SRR191578
breast		SRR191579
breast		SRR191580
breast		SRR191581
breast		SRR191582
breast		SRR191583
breast		SRR191584
breast		SRR191585
breast		SRR191586
breast		SRR191587
breast		SRR191588
breast		SRR191589
breast		SRR191590
breast		SRR191591
breast		SRR191592
breast		SRR191593
breast		SRR191594
breast		SRR191595
breast		SRR191596
breast		SRR191597
breast		SRR191598
breast		SRR191599
breast		SRR191600
breast		SRR191601
breast		SRR191602
breast		SRR191603
breast		SRR191604
breast		SRR191605
breast		SRR191606
breast		SRR191607
breast		SRR191608
breast		SRR191609
breast		SRR191610
breast		SRR191611
breast		SRR191612
breast		SRR191613
breast		SRR191614
breast		SRR191615
breast		SRR191616
breast		SRR191617
breast		SRR191618
breast		SRR191619
breast		SRR191620
breast		SRR191621
breast		SRR191622
breast		SRR191623
breast		SRR191624
breast		SRR191625
breast		SRR191626
breast		SRR191627
breast		SRR191628
breast		SRR191629
breast		SRR191630
breast		SRR191631
breast		SRR191632
breast		SRR191633
breast		SRR191634
breast		SRR191635
breast		SRR191636
breast		SRR191637
breast		TAX577453
breast		TAX577579
breast		TAX577580
breast		TAX577588
breast		TAX577589
breast		TAX577590
breast		TAX577738
breast		TAX577739
breast		TAX577740
breast		TAX577741
breast		TAX577742
breast		TAX577743
breast		TAX577744
breast		TAX577745
breast		TAX577746
breast		SRR553573
cerebellum		GSM532871
cervix		GSM532873
cervix		GSM532875
cervix		GSM532877
cervix		GSM532879
cervix		GSM532881
cervix		GSM532883
cervix		GSM532885
cervix		GSM532887
cervix		GSM532889
cervix		GSM532929
cervix		SRR040006
cervix		SRR040008
cervix		SRR040010
cervix		SRR040012
cervix		SRR040014
cervix		SRR040016
cervix		SRR040018
cervix		SRR040020
cervix		SRR040022
cervix		SRR040024
cervix		SRR040026
cervix		SRR040028
cervix		SRR040030
cervix		SRR040032
cervix		SRR040034
cervix		SRR040036
cervix		SRR040038
cervix		SRR040040
cervix		SRR040042
cervix		SRR037876
fibroblast		SRR363673
fibroblast		SRR363674
fibroblast		SRR363675
fibroblast		SRR363676
fibroblast		SRR553572
frontal-cortex		SRR139164
heart		SRR139165
heart		SRR139166
heart		SRR139167
heart		SRR139169
heart		SRR139170
heart		SRR342894
heart		SRR342895
heart		SRR342896
heart		SRR342897
heart		SRR342898
heart		SRR342899
heart		SRR342900
heart		SRR342901
heart		SRR553574
heart		SRR139171
kidney		SRR139172
kidney		SRR139173
kidney		SRR139174
kidney		SRR139175
kidney		SRR139176
kidney		SRR553575
Kidney		SRR039611
liver		SRR039612
liver		SRR039613
liver		SRR039614
liver		SRR039615
liver		SRR039616
liver		SRR039617
liver		SRR039618
liver		SRR039619
liver		SRR039620
liver		SRR039621
liver		SRR039622
liver		SRR039623
liver		SRR039624
liver		SRR039625
liver		SRR139177
liver		SRR139178
liver		SRR139179
liver		SRR139180
liver		SRR139181
liver		SRR139182
liver		SRR139183
lung		SRR139184
lung		SRR139185
lung		SRR139186
lung		SRR139187
lung		SRR139188
lung		SRR139189
lung		SRR139190
lung		GSM379266
ovary		SRR139191
ovary		SRR139192
ovary		SRR139193
ovary		SRR139194
ovary		SRR139195
ovary		SRR139196
ovary		SRR139197
ovary		SRR139198
placenta		SRR139199
placenta		SRR139200
placenta		SRR139201
placenta		SRR330904
skin		SRR330905
skin		SRR330906
skin		SRR330907
skin		SRR330908
skin		SRR330909
skin		SRR330910
skin		SRR330911
skin		SRR330912
skin		SRR330913
skin		SRR330914
skin		SRR330915
skin		SRR330916
skin		SRR330917
skin		SRR330918
skin		SRR330919
skin		SRR330920
skin		SRR330921
skin		SRR330922
skin		SRR330923
skin		SRR444043
skin		SRR444045
skin		SRR444048
skin		SRR444050
skin		SRR444051
skin		SRR444060
skin		SRR444061
skin		SRR139202
spleen		SRR139203
spleen		SRR139204
spleen		SRR139205
spleen		SRR139206
spleen		SRR139207
spleen		SRR139208
testes		SRR139209
testes		SRR139210
testes		SRR139211
testes		SRR139212
testes		SRR139213
testes		SRR553576
testes		SRR139214
thymus		SRR139215
thymus		SRR139216
thymus		SRR139217
thymus		SRR139218
thymus		SRR139219
thymus		SRR094129
uterus		SRR094130
uterus		SRR094131
uterus		SRR094132
uterus
..............................................................TAGCAGCACGTAAATATTGGCG.................................................................................................................................222564266.50112853327259991159212659572702920970216412861763134516852474150716561073604448140123032131716126222651279822275141688581711706753679431016464282066951396462345191107945471335500135716012326642410145295505171330322521431448247262842633918710999121066309270102327364389106411431012567881521941732284512526691229170128104218896972017410837042374241767681472019923588313726149143331463393256161485791913632581326128273295621247302192903951931921603432153126452216671584719711129254174999462347420619015236121379178052423652491765117875531587149920023818805882896252896404185128327238144911976627415491173914120511592607125017033258311997986356433265558057358657044501257378923266139317119326126564731582536085243224091837299172329782614165931322524853233879199076152206260511611274450411376989881173131320110410119602456244222086023948439911522381572700891060020119574964326954194814153972512073301661521121214095662265277175518432197162827029424105582006828982411953115099568641094781001383983166293612774117522807310139034172675412117412422208216346266557417945673532720525520187216408474761680303454281629025292002200370147820526986502000045363734369335629704210881767485128147486488025348150024178443369959621747711097281890656618223169841227500172681002446273412782122720037203086134201381042832240559925960401
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panTro4
TGTTTTCATCATCAGT--TGTTCGTT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATGTTAAACACCAATATTACTGTGCTGCTTTAGTGTGACAGGGATACAGCAACTATTTTATCATTTGTTTG-TATTTCC----------------------------CTTTAAGGTAASizeHit CountTotal NormTotal
No Reads
rheMac3
TGTTTTCATCATCAGA--TGTTCATT-TTATGTTTGGATGAACTGACATACTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATGTATTAAACACCAATATTACTGTGCTGCTTCAGTGTGACAGGGATATAGCAACTATTTTATCCATTGTTTG-TATTTCC----------------------------CTTTAAGGTAASizeHit CountTotal NormTotal
No Reads
mm10
TATG-GTACCATCACAGTTG----TA-TTATGTTTGGAT-ATCTGACATGCTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAATATTAAACACCAATATTATTGTGCTGCTTTAGTGTGACAGGGATATAGCAACTCATT-----TCTGTTTGTTATTTCC----------------------------CTTTAAGATAASizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
..............................................................TAGCAGCACGTAAATATTGGCG.................................................................................................................................2221747064.503494129101311041182221531487526796329895295089113417401338100000000026493186681981075024602607663331299874321231186413312942239838302128123519936596961226150520021153614670371213034277517391530387856102341732603350322728347219676073307730741120548105121725007511147205414055840042943519486671022362544909776399821991951490899266100724163665718388517754617114872453233261348288239316250672582379326485546536043627547952114921618151920882018191516121627923529124931729120158146058451295517565285694826558001389160005819311166312037817551923441491327885332381801130618377140100794829000000055432648988003517156246993257
..............................................................TAGCAGCACGTAAATATTGGCGT................................................................................................................................232593383.0011867661564402826554782531312215466158837125324819610000000003289227107812552863027204022477022929023855230850034572831474816823415861922487279828983145438123014262681223266255072163607936543351992711145788715611166541548920994162958267911211387221234916016529672522962123125165114568574221054257184571338810271809188525270956422491775130012463095676427220228989058483292484992164530423385132321376604837762121734512591104850001449811177677074307264502536411301138523300421141722801395000100013441733408309510440920581028
..............................................................TAGCAGCACGTAAATATTGG...................................................................................................................................202231074.004621482382341440493854565080141674218319100000000032512101056119135656712446961044667466801064232716477114078382914128315136037911817770074115512036339985172915732861017694853242362643582438611444685700376371179857004981667152016628982610913814567518551426330728113674512231801267214081457101018163329923254512717045127943201341135020245440555635113610163960003878113000211251423920165065458253173132633991183000000012103185722447313694
..............................................................TAGCAGCACGTAAATATTGGC..................................................................................................................................212140580.5028116132735884722958321345391211233132858599100000000021912141010119525333486741572141762862415080361981471203843314653101560643170862853085819048561897321541387716209210011241088250325082111104114915499567301952251036495885192131101781635982439706133131221313022669451341824259191936925984911392381189314912839389352565869321401208323282011247361551682305612532751083112401184420582000595311700024123107384020503172117144194106512748680000000169531492447322491423259
..............................................................TAGCAGCACGTAAATATTGGCGA................................................................................................................................232124724.00249448109121721510122226256587232081488568000000000003499204713119927620148726227148196271188405000000121373167435254510958169265361562754557126253135081483019181260100220372413147466005157345555334769371627489844525010644891119176633353896675245422140323729858158886468836469441343721524049153758511672313171192191351761737720202829619416109146919120356022623841845721097000293300405100206510092419364201466067288465418000000077620742876012896626382
..............................................................TAGCAGCACGTAAATATTG....................................................................................................................................19255351.5011070327318874201932541846212739000000000004543616616475611066823163023381482966181021151376538106990216201722511912023350301970725519214047362284015416637003585742809642700230312510213131111541133200221201335902859148925999773905081211159181110971415223686411313303242000402000000122237006134328201410536410300000001105205231862023
...................................................................GCACGTAAATATTGGCG.................................................................................................................................17240911.5081823000048847291000000000000000000000012527229451206500807820011800000000000000000000000071927819471213611000000031761990004563450110728421400000000000000030500000000000000000000000000000000000000000000000009007982724813619130000000000000
.............................................................CTAGCAGCACGTAAATATTGGCG.................................................................................................................................23131896.003189615341224003030000000000001536326091412000100000000000007344871160132625857453100448622677921301231330002118381811042541015488000000000020100161000000001006225732301082101310132080107661620002510000002913010033000313000000043046319101
..............................................................TAGCAGCACGTAAATATTGGCA.................................................................................................................................22223950.00479003723443136246234216431093614000000000001549100490588135571787416610721348020021772019107914374308342230952027910476323122670954210833352001801282400378326467182523723209100401214642651423202971701761061681481693032424230392915552281717110141152137598133270745617640028231014126340514851144635700746147237573390008000040006202141031226622121561961170000000271412910942795155124
..............................................................TAGCAGCACGTAAATATTGGCGTA...............................................................................................................................24119233.001923364485919520921110400000000000046115232713622525900000022010142144741918111201634038212323369867552552792101002401572482512108010002430142021193261103195331010354118121113151752522810520216314273105269394809070001020136000018510113613244172522000000013231082410871813
.............................................................CTAGCAGCACGTAAATATTGG...................................................................................................................................21110196.00101961004030000000000000000015034222000000000000000020000300110013023219211704110121000101010010513800000000000000000000000000000030401000000000000011001860000170000000010000001010010000000040410
.............................................................CTAGCAGCACGTAAATATTGGCGT................................................................................................................................2419580.00958006111030011000000000000027048100000000000000000000014520000159114237091083111222181312000201312150800053310000000000000000170000000101031251010000310000000120411374410900092002000000000000110001000000001738310000
..............................................................TAGCAGCACGTAAATATTGGCT.................................................................................................................................2227923.5015847519104319919800441111000000000137423291612913248819010000121962614216490418204010324333913191950913233144156118311332033019189671310214006402301214109171215355441731753527917104715228117222141015003580310363683727804103100064000000016100142040413800000001093139812621414
...............................................................AGCAGCACGTAAATATTGGCG.................................................................................................................................2126978.00139569406223157586001210000000000001047562323259038835252029190000003000054822336891211818218927443373206398342454459279292245111524395631448220641109201559481324291247712460127910120011091313211922252746256311442191110301163257677234922410163101000139511731000134123131680000000192316113421
..............................................................TAGCAGCACGTAAATATT.....................................................................................................................................1826880.001376015481531212603610200100000000000141122895001628193619100001242031099500222173822454662244194120013577938862260001430010000100001010009000000005050564567397855981144134001000010604583361163921210973112000200000001210000407437231482800000005311694515251
..............................................................TAGCAGCACGTAAATATTGGCGTAT..............................................................................................................................2516436.006436091443881007000110000000003611011416410511500000001000022016521120271125360930022810171711237010533777500000003120011100661241100352000218123190121114101010122012200020622995855400004800692000021110062003711160000000095441744325
..............................................................TAGCAGCACGTAAATATTGGCAA................................................................................................................................2326307.5012615188019821151619471430000000000033018881473261613961102013160000001122254131201011014421134954502812640057329139111181130301020012112175742564119193132383320181734146277115355276307123633353012450160101230299158531088060922141545316980001170020000110002231610124700000001184481112194044
.............................................................CTAGCAGCACGTAAATATTGGC..................................................................................................................................2215148.005148131141000000000000000000111510000000000000000000000025100001130820356538113222800084940000031150000000000000001300000000010125440001100100000002403022112900031000000000000010000000000000014873200
...............................................................AGCAGCACGTAAATATTGGCGT................................................................................................................................2225086.50101730218512295314000200000000009101937351171100310000000200013233281580132525688653878459606180108620113282714313413738103142612320818370013210016411000105512902158931430116407210013027181135653014745416338610200005101100853711014600000004135957180123
...................................................................GCACGTAAATATTGGCGT................................................................................................................................1824994.00998800092611661557000000000000000001702411261781170010110000000000003812230213431405264616255269200000001002554733852150111284000211928017101810000000125000000010500000000002030100000000000702854000430000003815200000017144570000000076416401
..............................................................TAGCAGCACGTAAATATTGGA..................................................................................................................................2124921.0098424140132815416154100000000000963662643368610271313022254188030008103431450543013811131321831069210596815900475463411340150120411295113351518519281610217260112225225513168108928139544141167222115114883635518175361515000398000000591040023030341847460000000752799340308
..............................................................TAGCAGCACGTAAATATTGGCGTAA..............................................................................................................................2524017.508035017126495000100200000000000012043522020100000000001000007142011401811212696135432936294466310002901712862431140500100001001012873421190021110196212231741110012110011015204611010024018329000060006810000020001186000091000000051104378448136
..............................................................TAGCAGCACGTAAATATTGGCGC................................................................................................................................2323367.0067340206201261470032110000000000060471251121031025000000101011471552161446151248214863952719152234330111258715954076134002200030020301511933610200030014531270631123394123830021005504141901174092185670003700152000343100622201181600000001097535652164
..................................................................AGCACGTAAATATTGGCG.................................................................................................................................1823355.5067110012727021700010000000000000600311323726014561300000010000011016269169231543574162118177391419512629000507801769434219512730002110011001000000019200000001060005010000100100000000010125163300021300000002000000003938879000000005295011
..............................................................TAGCAGCACGTAAATA.......................................................................................................................................1622989.0059780000000200000000000000000000000000000310001114300030000000000002626110419762351054300000000211000000000000000000000000000205000000000000000000000000000000000000000000000000049173960000000000000
....................................................................CACGTAAATATTGGCG.................................................................................................................................1622542.505085000000000000000000000000000000000000040000000000000000000000069477752142044593200000000271418900000210460230000000000000003040000000000000000000000000000000000000000000000000564256370000000000000
.................................................................CAGCACGTAAATATTGGCG.................................................................................................................................1922098.004196001474658000000000000000001811929187000350000000010050413164245169971727616311215936151520241610047564336010026031000012030000000000670000000104003102000010200000000000103615000530000001340000100034522000000011731500
................................................................GCAGCACGTAAATATTGGCG.................................................................................................................................2022070.0041402621587204001010000000000003021375882510192201015400000000001114111116380470176810419134123144998281126927610118151511016210351000000020100432120200000000103064616200210817100100016117136164900057000000338375000100004830000000386255000
..............................................................TAGCAGCACGTAAATAT......................................................................................................................................1721859.5037190000111600000000000000000000002120010000000000331130000000000001618783115822815630000000000300000000100001110000000000010300000000000000000200000000000000000000000000006000453130000000000000
.............................................................CTAGCAGCACGTAAATATTGGCGA................................................................................................................................2411766.001766110201000000000000000009123000010000000000000000000100000000028215424043262200031120000092600000000000000004000000000000201100010001000000010020224270008001000010000010000000000000002031600
............................................................TCTAGCAGCACGTAAATATTGGCG.................................................................................................................................2411715.001715000000000000000000000004138143000000000000000000000321308166395128152005742453271746244000313302000016000000000000000050001000000000000000010630000000010001181500090000001021000100000000000000032111800
........................................................................................................ACCAATATTATTGTGCTGCTTT.......................................................................................2211656.00165645816781394530111000000000000000710100845530000000000000331179204104277791446552111116311871652410200113003041081211422200100001000123945033430001000511111101332710426000244000000000000236952232572000000007235822
..............................................................TAGCAGCACGTAAATATTGGCC.................................................................................................................................2221478.50295706278372002001000000000009166313200103202200012120006140354131074503226275265440341900063514713034120010000500003242521050011011201302013343211130120010101130431026624100028000000032400020012227000000013387116602
..............................................................TAGCAGCACGTAAATATTGGT..................................................................................................................................2121396.5027931163478105611000000000004351526632100111200000020225102210100132027010320925171118187401117125012200522003110112113110000004050118018431546202710011021101272211310254517408000500000000011004401029208000000031232111264
..............................................................TAGCAGCACGTAAATATTGGCGG................................................................................................................................2321352.0027040132219121063200000000000012012134001113300000012111103410230213027526622976918181221191220811613002110030100432070880000000255260325720011040010002003470911921271740002009000022000000011695000000035969820610
.............................................................CTAGCAGCACGTAAATATTGGA..................................................................................................................................2211249.001249000000000000000000000003011000000000000000000000000000000000030100000000000000000012310000000000000000000000000000000000000000000000000000021300030000000000000000000000000000000000
....................................................................CACGTAAATATTGGCGT................................................................................................................................1721234.502469000050450000000000000000000000113219000021000000000000000000000000191423203232000000007521070040100000220000000000000000010000000000000000000000000000000000000000000000000261114160000000000000
...................................................................GCACGTAAATATTGGCGA................................................................................................................................1831144.67343400013177910000000000000000010981640633243733200112100000000000021111622537516122025475341310000041555733012599800060260342100000001800000000010000000000109600000000000014418000300000021418200000044115815000000001391200
..............................................................TAGCAGCACGTAAATATTGGAA.................................................................................................................................2231056.003168031023002514000000000004592212212433052303761100000031062110101100020138275701031000078155000420910105112218151225182110000109011999134677664700421005010285341446761275650001030000000420000200001230000000156164721
..................................................................AGCACGTAAATATTGGCGT................................................................................................................................1921051.002102000497220000000000000000013000047200005500000000000005114101350141236102131110002614454202940900000000000000000000800000000202000000000000000000001005005924510004500000000200000000151200000000076366500
.........................................................................................................CCAATATTATTGTGCTGCTTTA......................................................................................2211046.001046020027401100050000000000000000110030200000000200000002001100020337378372627410300022113363010011100001001210001000000000000619317201000000000001131238146214000120100000000000801111311471000000006141611
.............................................................CTAGCAGCACGTAAATATTG....................................................................................................................................2011030.00103001000000000000000000000200000000000000000000000000000000000002671512603200010000000000003360000000000000000000000000000100100000000000000000102010000000000000000000000000000000000100000
..............................................................TAGCAGCACGTAAATATTGT...................................................................................................................................202896.5017932223715100043010000000000047089210500121100411101104000200660020179964840043000000110002001140221511206002001130100010126013914402302202120000000001414084133164154000170000000010002300003420000000323105620
.............................................................CTAGCAGCACGTAAATATTGGCA.................................................................................................................................231869.0086910000000000000000000000702310000000000000002000010000000000001514610101000013000000078200000000000000000000000000000000100000000000000032000103300000000000000000000000000000000032100
..............................................................TAGCAGCACGTAAATATTGGCTC................................................................................................................................232844.5016890110510000000000000000020100000000000000000000000000001000000695297447100225000060001016800000000100000000101000000010000101200000000000000003017230200010000000000000000000000000000023201
..............................................................TAGCAGCACGTAAAT........................................................................................................................................152780.50156100000011000000000000000000000000000000011004162151200000000000060321056267134932100000000000000000000000000000000000001020000000000000000000000000000000000000000000000000002200000000000000
...............................................................AGCAGCACGTAAATATTGG...................................................................................................................................192691.50138307248832000000010000000005521516530232300021811000000000000058102002492210109185234103000001301010341182512261740640000000010000000275220659312001200000000000220210271200600000000510002002071230000000420100
......................................................................CGTAAATATTGGCG.................................................................................................................................143640.67192200000000000000000000000000000000000000000000000000000000000000000000000000000051183800201010241120000000000000000010000000000000000000000000000000000000000000000000000000000000000000
............................................................TCTAGCAGCACGTAAATATTGG...................................................................................................................................221546.0054600000100000000000000000712110000000000000000000000210143025812002388312500000100000000000020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................TAGCAGCACGTAAATATTGA...................................................................................................................................203503.3315101203320002010000000000010562737101110013510004400200201010001001231639247000100000710700110100120610431301230104000000042126501402152000100001000007417029511920500059000000020100010010334000000005796211
...............................................................AGCAGCACGTAAATATTGGC..................................................................................................................................202469.509390712184000000001000000000545241995950001220000000000001111340000411984612324131110244000312141108010220113111323011000008000000061775069613100002101100100006601031162562112000000285100000011516000000083732600
..............................................................TAGCAGCACGTAAATATTGGCGTAG..............................................................................................................................251463.004630000840210000000000000000000276003239000000010000024001401150814623313014000141200000010200312101000101000000000200000000000000000000000000271200010022000000000130186306429000000001131200
..............................................................TAGCAGCACGTAAATATTGGCGAG...............................................................................................................................242458.009160106724001010210000000008025105000042000000002010106600221331001535872672815801039302943000000213001000053211024100000050402554500000010000020038080301737000200270000000000200102550000000157272711
........................................................................................................ACCAATATTATTGTGCTGCTTTA......................................................................................231443.0044304001219200001000000000000000000300000000000000000010000010000021524150282502300021013500200000000000005220020000001012110219020000000001001127430420001201000000000005353710440000000230211
..............................................................TAGCAGCACGTAAATATTGGG..................................................................................................................................212442.50885001686005211000000000003142103000000000000001100200010100032010327751513546781195001011340011000010000000201001110000010215041221200011000001100024509110410000200000000000000010010000000001131902
.....................................................................ACGTAAATATTGGCG.................................................................................................................................153436.001308000000000000000000000000000000000000000000000000100000000000022510713011146761771677600000000190000010002022510000000000000000800000000000000000000000000000000000000000000000005113933460000000000000
............................................................TCTAGCAGCACGTAAATATTGGCGT................................................................................................................................251434.004340000030000000000000000020110000000000000000000000010100501020145628720100200030100220004000000000000000010000000000000000000000000000000010002810700010000000100000000000000000000014121201
........................................................................................................ACCAATATTATTGTGCTGCTTTT......................................................................................231405.00405122142401000000000000000000002410150000000000000000000000000110312112320180300000000110000000000000101410104000000031101175250000000000050003209330900095000000000000141241410700000000663011
........................................................................................................ACCAATATTATTGTGCTGCTT........................................................................................211400.00400230131010000200000000000000001300100000000000100000000120010100314172403210012410001000000010000020100600010004030544533002000000002000410415725725000640100000000000400119194000000032011500
..............................................................TAGCAGCACGTAAATATTGCG..................................................................................................................................212397.5079503164800100000000000000302100000000000000002201501020000001005810281273531901375500113520000000000010000001000240000000000111100000020000000000000108152100030000000000000100000120000000236182630
..............................................................TAGCAGCACGTAAATATTGGCGTC...............................................................................................................................242358.00716040188000000000000000003001010000100000000000000002110120021010855822224520001012112000000000000000102000001200000003141010100001100000000001000045214500040090000000000101000000000000099515810
..............................................................TAGCAGCACGTAAATATTGGCTA................................................................................................................................232355.0071001116400010000000000000800210008000020000000000000000000010001401530122020011110000000001001000000000512002122019312464031513100000000010021602011248124000000100000000000100000000000000605410400
..............................................................TAGCAGCACGTAAATATTGGCGAC...............................................................................................................................242351.0070200013210000000000000000007024100010000000000000021101421022271012793844321089001181033140000000000000000002010400000004150000121000000000000000100010121600020070000000000000000100000000156393600
...............................................................AGCAGCACGTAAATATTGGCGA................................................................................................................................222349.0069815044100000100100000000061251651353000110000000000002250003117412212326612216000161111160207118012114000100016100010087209211241130002000110000007701201910118201000000002300000000020000000002274901
................................................................GCAGCACGTAAATATTGGCGT................................................................................................................................212326.506530401101500201001000000000140652153000000000000000000195101201220403445127867600013813130490000000000000031010014000000010202025610000021000200036081431728000100010000111000010010320000000053324201
...................................................................GCACGTAAATATTGGC..................................................................................................................................162272.505450000000000000000000000000000000000000000000000000000000000000201001000000000001318000181816010911100000000000000010200000000000000000000000000000000000000000000000001362379240000000000000
..............................................................TAGCAGCACGTAAATATTGGCGTAC..............................................................................................................................251245.002450000310000000000000000010000000000000000000000000000000000000181112231011000103101000000000000000000000000000000030100020000000000000000000000658000000240000000000110000110000000060212400
..............................................................TAGCAGCACGTAAATATTGGCTCC...............................................................................................................................242239.00478000000000000000000000000000000000000000000000000000000000000019478141000011000000007540000000000000000010000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................CAGCACGTAAATATTGGCGT................................................................................................................................202236.5047300098120000000000000000060211114000000000000000000346201201421443945110118000173129200450000001000000000000021000000000200000000000001000000000000941200016000000121000000001217000000000193800
..............................................................TAGCAGCACGTAAATATTGC...................................................................................................................................202232.504652421278000000000000000001001111500000000300100002001100232002010415332100121000002002000012040100000000000000000002240311230000300000000000001077900090000000100000000003310000000192500
.........................................................................................................CCAATATTATTGTGCTGCTTT.......................................................................................211230.0023001022823000000010000000000010011100011100000000000100110000011032996743201100100320000000000010001000050000000000000116100100000000000511111010004000000000000010010841550000000420101
.........................................TCTGACATGCTTGTTCCACTC.......................................................................................................................................................211226.0022600001881000000000000000000000001000000000000000000001000020253002210031340000002000000000000000000000020000000001000000000000000000000002013030001000000000000000059152940000000040700
.............................................................CTAGCAGCACGTAAATATTGGCGTT...............................................................................................................................252221.50443010203000000000000000002020100000000000000000000000000000000034123400200100001100000029300000000000000000000000000000100000010000000000000010738000400300000000000000000000000000157400
..............................................................TAGCAGCACGTAAATATTGGCGTAGT.............................................................................................................................261221.002210002300100000000000000001000001000000000000000000000011100220100000000010111000000010000000000000000000000000000000010000000000000000000327530000009000000000000002002000000002427700
...................................................................GCACGTAAATATTGGCGTA...............................................................................................................................191204.002040006302400000000000000000000002410000000000000000000010517280011000000000000019182390000000000001000000000300000000000000000000000000000000001012100010000000000000000010000000000021100
...................................................................GCACGTAAATATTGG...................................................................................................................................153201.676050000000000000000000000000000000000000000000000000000000000000799001000000000000141000919123117155000000000000000000000000000000000000000000000000000000000000000000013943263380000000000000
............................................................TCTAGCAGCACGTAAATATTGGCGA................................................................................................................................251192.00192000000000000000000000004133530000000000000000000000330514162222035211510100000000010000020000000000000000000000000000000000000000210000000000010000000000000010000000000000000000021400
............................................................TCTAGCAGCACGTAAATATTGGC..................................................................................................................................231189.00189000000000000000000000000011000000000000000000000000100510011178344000000000000000200010000000000000000000000000000000000000000000000001100000500030000000000000000000000000000071400
rn5
TATTGTTATCATCACA--CTTGTATTATTATGTTTGGAC--ATTGACATACTTGTTCCGCTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAATATTAAACACCAATATTATTGTGCTGCTTTAGTGTGACAGGGATATAGCAACT-----------------------CC----------------------------CTTTAAGATAASizeHit CountTotal NormTotal
No Reads
canFam3
C--TTTTACCATGAGA--TACTCATT-TTATATTTGGATG-ACTGACGTACTTGTTCCGCTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAAAATTAAACACCAATATTATTGTGCTGCTTTAGCGTGACAGGAATATAACAGCTATTT-----ATTGT--GCTATTCTC----------------------------CTTTAAGATAASizeHit CountTotal NormTotal
No Reads
monDom5
CGT-------------------------------------------CTTGCTTGTTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATCAGTCTGAAACCCCAATATTACTGTGCTGCTTTAGTGTGGCAGGCCCACTCCAGCA---------AGGGTTGG-CTTGTCTCTAGTAAGTCAGGACGGTTCTAGGCTTACTTTTACATTGSizeHit CountTotal NormTotal
No Reads

Generated: 12/12/2014 at 10:52 AM