ID:

clust_557_TRPC4AP

 Coordinate:

chr20:35003522-35003744 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.7 -39.4 -39.4

Sense Strand Reads

AACTGGGGCTGCTGGGGGCCCCCTTCCCCCAGTCCTATCTCACCTCTGTGCAGGGAGAGCTCTGTGGGTGGCCCGAGGCCTGGGGCCACTCTCCTCCCTGCCTGATGGCTACCCAGGTTCACCAGGGGCCACTGGGGCTCCCACCAGCCCCTGACCCTGTGGGCCTGTGGCCTTGCAGGAGAACGTCAGCTGCCTCAACACCAGCCTGGTGATCCTGATGCTGGCCCGACGGAAAGAGCGGCTGCCCCTGTACCTGCGGCTGCTGCAGCGGATGGAGCACAGCAAGAAGTACCCCGGCTTCCTGCTCAACAACTTCCACAACC
****************************************************************************************************************************************........(((((.((....(((((((((...(((....(((((..((....((((.........))))...))..)))))..)))))))).))))....)).)))))......************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR039623
liver		 SRR553572
frontal-cortex		 SRR039622
liver		 SRR040008
cervix		 GSM450602
brain		 GSM450604
brain		 SRR015447
breast		 SRR039611
liver		 SRR039616
liver		 SRR039620
liver		 SRR139179
liver		 SRR330908
skin		 SRR039618
liver		 GSM450601
brain		 GSM450607
brain		 TAX577738
breast		 RoviraIPAgo2
breast		 SRR039612
liver		 SRR039625
liver		 SRR139182
liver		 SRR139190
lung		 SRR139203
spleen		 SRR139204
spleen		 SRR139208
testes		 SRR139209
testes		 SRR139211
testes		 SRR191605
breast		 SRR330912
skin		 SRR330914
skin		 SRR330922
skin		 SRR342898
heart		 SRR342899
heart		 GSM450600
brain		 SRR330906
skin		 TAX577579
breast		 TAX577741
breast		 TAX577589
breast		 TAX577588
breast		 TAX577580
breast		 TAX577740
breast		 TAX577742
breast		 GSM450605
brain		 SRR342894
heart		 SRR330923
skin		 GSM450598
brain		 SRR095854
brain		 TAX577745
breast
..........................................................................................................................................................................................................................................................................AGCGGATGGAGCACAGCAAGAAGT................................. 24 0 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................AGCGGATGGAGCACAGCAAGAAGTA................................ 25 0 1 3.00 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGACCCTGTGGGCCTGTGGC........................................................................................................................................................ 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GATCCTGATGCTGGCCCGACGGAAA........................................................................................ 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGGAGAACGTCAGCTGCC................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GCGGATGGAGCACAGCAAGAAGTA................................ 24 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GCGGATGGAGCACAGCAAGA.................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGACGGAAAGAGCGGCTGCC............................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CGGATGGAGCACAGCAAGAAGTAC............................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CAGGAGAACGTCAGCTGCCT................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................CCCTGTACCTGCGGCTGCTGCAGCGGATGGA............................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GCGGATGGAGCACAGCAAGAAG.................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TGGAGCACAGCAAGAAGTACCCC............................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGGAAAGAGCGGCTGG.............................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TGCGGCTGCTGCAGCGGATGGAGCA............................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GGCCCGACGGAAAGAGCGGCTGGCCCC.......................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGGAAAGAGCGGCTGCCCCT.......................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GGGCCACTCTCCTCCCTGCCTGATGGC...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................GGAGCACAGCAAGAAGTACCCC............................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGATCCTGATGCTGGCCCGACGGAA......................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CTGACCCTGTGGGCCTGTGGCCA...................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GATGCTGGCCCGACGGAAAGAGCGGCTGCC............................................................................. 30 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGGAGAACGTCCGCTGCC................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGGCCTGTGGCCTTGCAGGAGAATG.......................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTGATCCTGATGCTGGCCCGACGGAAAGAGCG................................................................................... 33 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CGGATGGAGCACAGCAAGAAGTA................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CTGACCCTGTGGGCCTGTGGC........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGGAAAGAGCGGCTGCCCC........................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CACCTCTGTGCAGGGAGAGC....................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGACGGAAAGAGCGGCTGGCCCT.......................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................CTGCAGCGGATGGAGCACAGCACGAAGTACCC............................. 32 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CTGACCCTGTGGGCCTGTGGCAT...................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TGCGGCTGCTGCAGCGGATGGAGCACAG......................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGGAGAACGTCAGCTGCCTCAA............................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGGGGCCACTCTCCTCCCTG............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGCTGGCCCGACGGAAAGAGCGGCTGC.............................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACGTCAGCTGCCTCAA............................................................................................................................. 16 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AGCCTGGTGATCCTGATGCTGGCCCGACG............................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGACCCTGTGGGCCTGTGG......................................................................................................................................................... 19 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................ACCTGCGGCTGCTGCAGCGGG................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................CGGCTGCTGCAGCGGATGGAGCACA.......................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CAGGAGAACGTCAGCTGCCTCAA............................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CTGACCCTGTGGGCCTGTGG......................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................ACAGCAAGAAGTACCCCGGC......................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGGAGAACGTCAGCTGCCT................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GCGGATGGAGCACAGCAAGAAGTAC............................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGGTGATCCTGATGCTGGCCCGACGG........................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGGAAAGAGCGGCTGCCCCT.......................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCTGGCCCGACGGAAAGAGCGGCTGC.............................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGGAAAGAGCGGCTGC.............................................................................. 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGACCCTGTGGGCCT............................................................................................................................................................. 15 0 12 1.00 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCAGGGAGAGCTCTGTCGG............................................................................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TGTGCAGGGAGAGCTCTG................................................................................................................................................................................................................................................................... 18 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GGAAAGAGCGGCTGCCCCCGGAAC..................................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGGAAAGAGCGGCTGT.............................................................................. 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGACCCTGTGGGCCTGTGGCT....................................................................................................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCAGGGATAGCTCTGTCGGTCG............................................................................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCACGGAGAGCTCTGTCGG............................................................................................................................................................................................................................................................... 19 2 12 0.33 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCTGGCCCGACGGAAG........................................................................................ 17 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GCAGGGAGAGCTCTGTCGGTAG............................................................................................................................................................................................................................................................ 22 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................GCCGGGAGAGCTCTGTCGG............................................................................................................................................................................................................................................................... 19 2 9 0.22 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCCGGGCGAGCTCTGTCGGTGG............................................................................................................................................................................................................................................................ 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCTGACCCTGTGGGCCTGTGGAAA...................................................................................................................................................... 24 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................GCATGGAGAGCTCTGTCGGTTG............................................................................................................................................................................................................................................................ 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................GCACGGATAGCTCTGTGGGT.............................................................................................................................................................................................................................................................. 20 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................GACCCTGTGGGCTTGTGG......................................................................................................................................................... 18 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................CTGTGCTGGGAGAGCTCTG................................................................................................................................................................................................................................................................... 19 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................GCACGGAGAGGTCTGTAGGTGG............................................................................................................................................................................................................................................................ 22 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCACGGATAGCTCTGTAGGTG............................................................................................................................................................................................................................................................. 21 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................GCCGGGATAGCTCTGTGGG............................................................................................................................................................................................................................................................... 19 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CACTGGGGCTCCCAC................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................CTGCTGCAGCGGCTGGAG.............................................. 18 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AACGGAAGGAGCGGCTGC.............................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGGAAAGA...................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................GCAGGGAGAGCTCTGTGGGGTGT........................................................................................................................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................GGATGGAGCACAGCA....................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................GCAGGGAGAGCTCAGTCGGTAG............................................................................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTGACCCCGACGACCCCCGGGGGAAGGGGGTCAGGATAGAGTGGAGACACGTCCCTCTCGAGACACCCACCGGGCTCCGGACCCCGGTGAGAGGAGGGACGGACTACCGATGGGTCCAAGTGGTCCCCGGTGACCCCGAGGGTGGTCGGGGACTGGGACACCCGGACACCGGAACGTCCTCTTGCAGTCGACGGAGTTGTGGTCGGACCACTAGGACTACGACCGGGCTGCCTTTCTCGCCGACGGGGACATGGACGCCGACGACGTCGCCTACCTCGTGTCGTTCTTCATGGGGCCGAAGGACGAGTTGTTGAAGGTGTTGG
*************************************************************************........(((((.((....(((((((((...(((....(((((..((....((((.........))))...))..)))))..)))))))).))))....)).)))))......**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM450602
brain		 SRR342900
heart		 SRR330908
skin		 SRR330913
skin		 SRR330920
skin		 TAX577740
breast		 SRR342897
heart		 GSM450600
brain		 SRR330905
skin		 RoviraIPAgo2
breast		 SRR553576
testes		 TAX577746
breast		 GSM450606
brain		 SRR040018
cervix		 SRR330904
skin		 SRR330912
skin		 SRR342894
heart		 SRR444061
skin		 TAX577738
breast		 TAX577741
breast		 TAX577743
breast		 TAX577745
breast
...................GGGGAAGGGGGTCAGGATAG............................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GGGGGAAGGGGGTCAGGAT.............................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CCGGGCTGCC........................................................................................... 10 0 20 0.50 10 0 0 0 7 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CCGGTGACCCCG......................................................................................................................................................................................... 12 0 20 0.50 10 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................TTGATATGGCCGAAGGACGAGT............... 22 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGTCCAAGTGGTCCC.................................................................................................................................................................................................... 15 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GGAAACCGGTGAGAGGAGGGA................................................................................................................................................................................................................................ 21 2 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGGTCCAAGTGGTCC..................................................................................................................................................................................................... 15 0 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AGTTGTGGTCGGACTATTAGGC........................................................................................................... 22 3 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGGAATGTCCTCTAGCAGTC...................................................................................................................................... 20 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACTACGAGCTGGCTGCCT.......................................................................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACTACGACATGGCTGCCT.......................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................TTTCTTCTTGGGGCCGAAG...................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................ACTTGTGGTCGGACTACTAGAA........................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................CGGGCTGCCT.......................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CTTTCATGCCGACGGGGA.......................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................GGCTGCCTTT........................................................................................ 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................CGGGGGAAGGGGGTC................................................................................................................................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................CTCGAGACACC................................................................................................................................................................................................................................................................ 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................AGGAGGGACGGACT.......................................................................................................................................................................................................................... 14 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GACTACGAGAGGGCTGCC........................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................ATGGGGCCGCAAGACGAGTA.............. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Generated: 04/21/2015 at 07:55 PM