ID:

clust_1216_GRK6

 Coordinate:

chr5:177434903-177435128 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-24.4 -24.0 -24.0

Sense Strand Reads

CTCCCTGGCAAACTGAGCAGCATCTGACCCTGCTCTTCTCTCTGCACAGGGACCTGAAGCCCGAGAACATCTTGCTGGATGACCACGGTGTGTAAGGGTGCCTGGGGTGGGTCAGGGTGGGGTGAGATGCAGAGGCCTGGCCTGTTAACGGGTCCACCTGTTTCTCCACCCACACTCAGGCCACATCCGCATCTCTGACCTGGGACTAGCTGTGCATGTGCCCGAGGGCCAGACCATCAAAGGGCGTGTGGGCACCGTGGGTTACATGGGTGAGTCTTCTCTGCCCGGCCCACTAGCCTCCTGGGTTCCCTCACTATCCACCCACC
*****************************************************************************************************************************************.((((((....))))))....................(((.(((.((((.((((((((......)))).....)))).))))))).)))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139202
spleen		 SRR139204
spleen		 SRR139171
kidney		 SRR139173
kidney		 SRR039191
blood		 SRR139186
lung		 SRR139203
spleen		 SRR139216
thymus		 RoviraIPAgo2
breast		 SRR015447
breast		 SRR039617
liver		 SRR039622
liver		 SRR039623
liver		 SRR139165
heart		 SRR139172
kidney		 SRR139180
liver		 SRR139184
lung		 SRR139187
lung		 SRR139205
spleen		 SRR139206
spleen		 SRR139207
spleen		 SRR139211
testes		 SRR139214
thymus		 SRR139215
thymus		 SRR139219
thymus		 SRR191548
breast		 SRR191558
breast		 SRR330906
skin		 TAX577743
breast		 GSM450598
brain		 SRR191431
breast		 SRR342899
heart		 SRR039612
liver		 TAX577580
breast		 TAX577740
breast		 GSM532877
cervix		 SRR342895
heart		 SRR553573
cerebellum		 SRR553572
frontal-cortex		 SRR039620
liver		 SRR342897
heart		 SRR342901
heart		 SRR191544
breast		 SRR342896
heart		 SRR342894
heart		 SRR039625
liver		 GSM450605
brain		 SRR342898
heart		 TAX577579
breast		 GSM450599
brain		 GSM450602
brain		 GSM450606
brain		 GSM532879
cervix		 SRR040014
cervix		 SRR040020
cervix		 SRR330911
skin		 SRR330915
skin		 SRR553574
heart		 TAX577742
breast		 TAX577746
breast
........................................................................................................................................................TCCACCTGTTTCTCCACCCACA........................................................................................................................................................ 22 0 1 15.00 15 3 2 2 2 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCCACCTGTTTCTCCACCCAC......................................................................................................................................................... 21 0 1 8.00 8 1 2 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCCACCTGTTTCTCCACCCA.......................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CCTGTTTCTCCACCCACACTCAG................................................................................................................................................... 23 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCTCTGACCTGGGACTAGCT................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGAACATCTTGCTGGATGACCACGG.............................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGGGGTGAGATGCAGAGGCCTTT.......................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCTGACCTGGGACTAGCTGTGCA.............................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCCACCTGTTTCTCCACCCAAA........................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTGAAGCCCGAGAACATCTTGCTGGAT...................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CACGGTGTGTAAGGGTG.................................................................................................................................................................................................................................. 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAGGGCCAGACCATCAAAGGGCGTG.............................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CATGGGTGAGTCTTC............................................... 15 0 5 1.00 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................GTCTTCTCTGCCCGGCCCACTAG.............................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CATCCGCATCTCTGAC............................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ACCTGTTTCTCCACCCACACTCA.................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TTACATGGGTGAGTCTGTTCTG........................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGTTTCTCCACCCACACTCAG................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTCTGACCTGGGACTAGCTG.................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGGGTGGGGTGAGATGCAGA................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CCATCAAAGGGCGTGTG............................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGCCGCATTTGACCGTGCTCTTC................................................................................................................................................................................................................................................................................................ 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCCACCTGTTTCTCCACCCACT........................................................................................................................................................ 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACAGGGACCTGAAGCC......................................................................................................................................................................................................................................................................... 16 0 11 0.36 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGCAGCATCTTACCGTGCTCT.................................................................................................................................................................................................................................................................................................. 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AATCCGCATCTCCGACCTGGCA......................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACAGAGATCTGAAGCCTGAGAACATC............................................................................................................................................................................................................................................................... 26 3 10 0.30 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGGGACTAGCTTTGCATG............................................................................................................ 18 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGCAGCATCTCACCGGGCTCTTC................................................................................................................................................................................................................................................................................................ 23 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGCAGCAGCGGACCGTGCTCTT................................................................................................................................................................................................................................................................................................. 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTGACCTGGGACTAGCTGAGCG.............................................................................................................. 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCCACATGTTTCTCCACCCAAA........................................................................................................................................................ 22 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CAGGGACCTGAAGCC......................................................................................................................................................................................................................................................................... 15 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GAACAGGGACCTGAAGCACGAAA.................................................................................................................................................................................................................................................................... 23 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................CACAGGGACCTGAAGC.......................................................................................................................................................................................................................................................................... 16 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACAGGGACCTGAAGGCTGAGA.................................................................................................................................................................................................................................................................... 21 2 17 0.12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CTGAAGCCTGAGAACATC............................................................................................................................................................................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CAGCATATAACCCTGCTCTT................................................................................................................................................................................................................................................................................................. 20 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GGCACCGTGGCTTAGATGG......................................................... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GGGGTGCGTCAGGGTGGG............................................................................................................................................................................................................. 18 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TAGGGTGGTGTGAGATGCAG.................................................................................................................................................................................................. 20 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CAGGGACCTG.............................................................................................................................................................................................................................................................................. 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................AGGGCGTGTGGG.......................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GTCTGGGTGGGGCGAGATG..................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGGGCCAGATCATCAAAG.................................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACAGGGACCTGA............................................................................................................................................................................................................................................................................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACAGGGACCTGAAGC.......................................................................................................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AGGGACCTGAAGCCTGA...................................................................................................................................................................................................................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................AAAGGGCGTGTAGGC......................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................TCTGACCCTGCTCTTGT............................................................................................................................................................................................................................................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AGGCCACATCCGC........................................................................................................................................ 13 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TCAAAGGGCGTG.............................................................................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................CCCGACGACCAGACCATC........................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................CAGGGACCTGAAGC.......................................................................................................................................................................................................................................................................... 14 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................AAGGGCGTGTGGG.......................................................................... 13 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............AGCACCATCTGACCCCGCT.................................................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AGATGCAGTGGACTGGACTGTT.................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................CTGTTAACGGG.............................................................................................................................................................................. 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGGATGGGGAGAGACGCAGAGGC.............................................................................................................................................................................................. 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CGCTTCCGCATCTCTGACATG............................................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................TGCCGGACGACCACGGT............................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCCGACGGCCAGACCACC........................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GAGGGACCGTTTGACTCGTCGTAGACTGGGACGAGAAGAGAGACGTGTCCCTGGACTTCGGGCTCTTGTAGAACGACCTACTGGTGCCACACATTCCCACGGACCCCACCCAGTCCCACCCCACTCTACGTCTCCGGACCGGACAATTGCCCAGGTGGACAAAGAGGTGGGTGTGAGTCCGGTGTAGGCGTAGAGACTGGACCCTGATCGACACGTACACGGGCTCCCGGTCTGGTAGTTTCCCGCACACCCGTGGCACCCAATGTACCCACTCAGAAGAGACGGGCCGGGTGATCGGAGGACCCAAGGGAGTGATAGGTGGGTGG
****************************************************************************************************.((((((....))))))....................(((.(((.((((.((((((((......)))).....)))).))))))).)))***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553572
frontal-cortex		 GSM450607
brain		 SRR139219
thymus		 RoviraIPAgo2
breast		 SRR015447
breast		 SRR139193
ovary		 SRR191633
breast		 SRR342894
heart		 SRR342896
heart		 SRR330919
skin		 SRR444060
skin		 TAX577740
breast		 SRR039612
liver		 SRR037876
fibroblast		 SRR330917
skin		 SRR342899
heart		 SRR553576
testes
.................................................................................................CACGGACCCCACCCA...................................................................................................................................................................................................................... 15 0 20 1.15 23 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGTCCGGTGTAGGCGTAGAGAC................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGTGGCACCCAATATCCCCAC...................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGACTCGCCGTAGACTGGCGCGA.................................................................................................................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ACAGGTGGACAAAGAGGTGGGTGT........................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........TTGACTCGTCGTAGAC............................................................................................................................................................................................................................................................................................................ 16 0 3 1.00 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CAGGTGGACAAAGAGGTGGGTGT........................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGTCCGGTGTAGGCGTAGAGA.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGTCCGGTGTAGGCGTAGAG................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGTGGCAGCCAATATTCCCAC...................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CGGTGTAGGCG........................................................................................................................................ 11 0 20 0.20 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................TATGTCTCAGGACCGCACAATT.................................................................................................................................................................................. 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TGTCCCTGGACTT............................................................................................................................................................................................................................................................................ 13 0 20 0.15 3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0
......................................................................................................................................................................................................GGACCCTGATCGAC.................................................................................................................. 14 0 19 0.11 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................ACCCCGCTCCACGTCTCAGGACC.......................................................................................................................................................................................... 23 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................CCCACGGACCCCACCC....................................................................................................................................................................................................................... 16 0 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................TGTCCCTGGACTTCGGAC....................................................................................................................................................................................................................................................................... 18 1 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................GGTGGGTGTGAGGCTGGTGGAG........................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................AGAGACGGGCCGG.................................... 13 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................GACTTGTCCCTGGACTTGGGGA....................................................................................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Generated: 04/21/2015 at 08:27 PM