ID:

clust_112_APRT

 Coordinate:

chr16:88811189-88811409 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.8 -29.5 -29.4 -29.2
mature
star
  1. chr10:44268406-44268416 +
  2. chr11:69183644-69183654 +
  3. chr11:92026983-92026993 +
  4. chr18:63940462-63940472 +
  5. chr2:8497728-8497738 +
  6. chr2:106130989-106130999 +
  7. chr2:114159281-114159291 +
  8. chr4:6804963-6804973 +
  9. chr4:145670370-145670380 +
  10. chr5:695833-695843 +
  11. chr5:787165-787175 +
  12. chr5:142857246-142857256 +
  13. chr6:46174187-46174197 +
  14. chr6:62312135-62312145 +
  15. chr8:47484958-47484968 +
  16. chr8:55984219-55984229 +
  17. chr11_KI270827v1_alt:21853-21863 +
  18. chrX:37542870-37542880 +
  19. chrX:75247190-75247200 +
  20. chrX:118585574-118585584 +
  21. chr1:161479093-161479103 +
  22. chr11:1395515-1395525 +
  23. chr12:93249012-93249022 +
  24. chr12:132137973-132137983 +
  25. chr13:112087555-112087565 +
  26. chr15:41512529-41512539 +
  27. chr18:48053643-48053653 +
  28. chr2:185132651-185132661 +
  29. chr2:237642478-237642488 +
  30. chr2:237642506-237642516 +
  31. chr3:79429439-79429449 +
  32. chr4:92040999-92041009 +
  33. chr5:27420555-27420565 +
  34. chr6:25179232-25179242 +
  35. chr6:34535470-34535480 +
  36. chr6:141175147-141175157 +
  37. chr7:110409693-110409703 +
  38. chr8:47241225-47241235 +
  39. chrX:1452566-1452576 +
  40. chrX:3417442-3417452 +
  41. chr1:208157691-208157701 +
  42. chr10:31150631-31150641 +
  43. chr10:117445336-117445346 +
  44. chr12:115656091-115656101 +
  45. chr13:32674752-32674762 +
  46. chr15:38692840-38692850 +
  47. chr15:53346847-53346857 +
  48. chr15:73468143-73468153 +
  49. chr15:80942740-80942750 +
  50. chr16:1090024-1090034 +
  51. chr17:12267422-12267432 +
  52. chr2:95282391-95282401 +
  53. chr22:18124563-18124573 +
  54. chr22:45070248-45070258 +
  55. chr5:14735913-14735923 +
  56. chr6:89694146-89694156 +
  57. chr6:111005170-111005180 +
  58. chr6:169213037-169213047 +
  59. chr7:3593796-3593806 +
  60. chr8:13727914-13727924 +
  61. chr1:15015992-15016002 -
  62. chr1:23148193-23148203 -
  63. chr1:202045144-202045154 -
  64. chr1:203333053-203333063 -
  65. chr11:46413066-46413076 -
  66. chr12:132674217-132674227 -
  67. chr13:23952922-23952932 -
  68. chr13:26838289-26838299 -
  69. chr14:104768603-104768613 -
  70. chr15:99441090-99441100 -
  71. chr16:21637683-21637693 -
  72. chr19:13887263-13887273 -
  73. chr2:62406781-62406791 -
  74. chr2:232447857-232447867 -
  75. chr2:240236145-240236155 -
  76. chr4:3675889-3675899 -
  77. chr4:33988792-33988802 -
  78. chr5:7755316-7755326 -
  79. chr9:250582-250592 -
  80. chr5_GL339449v2_alt:490924-490934 -
  81. chr1:156909785-156909795 -
  82. chr10:124357164-124357174 -
  83. chr12:57770825-57770835 -
  84. chr14:19232105-19232115 -
  85. chr14:99552081-99552091 -
  86. chr16:21555032-21555042 -
  87. chr16:81733096-81733106 -
  88. chr16:88811338-88811348 -
  89. chr19:19516688-19516698 -
  90. chr3:79459832-79459842 -
  91. chr5:93595325-93595335 -
  92. chr6:154492923-154492933 -
  93. chr7:2281983-2281993 -
  94. chr7:155183427-155183437 -
  95. chr7:158279653-158279663 -
  96. chr8:137115882-137115892 -
  97. chr9:124497647-124497657 -
  98. chr9:131367663-131367673 -
  99. chr10:5621332-5621342 +
  100. chr6:42010808-42010818 +
  101. chr10:25691878-25691888 -
  102. chr10:101223698-101223708 -
  103. chr10:119748794-119748804 -
  104. chr16:30884895-30884905 -
  105. chr17:1030310-1030320 -
  106. chr17:82149799-82149809 -
  107. chr18:5986365-5986375 -
  108. chr19:42397137-42397147 -
  109. chr2:4104702-4104712 -
  110. chr21:35416436-35416446 -
  111. chr4:114472357-114472367 -
  112. chr4:136318847-136318857 -
  113. chr5:43041013-43041023 -
  114. chr6:72027234-72027244 -
  115. chr8:141306427-141306437 -
  116. chr17_KI270862v1_alt:69557-69567 -
  117. chr17_KI270910v1_alt:69557-69567 -
  118. chr1:93847628-93847638 +
  119. chr13:66050576-66050586 +
  120. chr15:77588045-77588055 +
  121. chr17:76043296-76043306 +
  122. chr17:79819622-79819632 +
  123. chr18:67489797-67489807 +
  124. chr19:13759264-13759274 +
  125. chr2:99541223-99541233 +
  126. chr3:41227750-41227760 +
  127. chr5:70044435-70044445 +
  128. chr5:70919853-70919863 +
  129. chr5:132766320-132766330 +
  130. chr6:24823155-24823165 +
  131. chr7:141519620-141519630 +
  132. chr18_GL383571v1_alt:135524-135534 +
  133. chr5_KI270897v1_alt:269782-269792 +
  134. chr5_KI270897v1_alt:468285-468295 +
  135. chr1:193317806-193317816 +
  136. chr22:20176920-20176930 +
  137. chr6:4468825-4468835 +
  138. chrX:141345005-141345015 +
  139. chr1:154788782-154788792 +
  140. chr12:34219278-34219288 +
  141. chr19:41347543-41347553 +
  142. chr3:90009865-90009875 +
  143. chr3:188848985-188848995 +
  144. chr7:139382790-139382800 +
  145. chr7:155259781-155259791 +
  146. chr9:40519184-40519194 +
  147. chr9:43147496-43147506 +
  148. chr9:63354638-63354648 +
  149. chr9:64659155-64659165 +
  150. chr9:65164359-65164369 +
  151. chrX:83621403-83621413 +
  152. chrX:148665795-148665805 +
  153. chr2:101468717-101468727 +
  154. chr9:110114435-110114445 +
  155. chr1:235866795-235866805 -
  156. chr11:70726170-70726180 -
  157. chr12:108521534-108521544 -
  158. chr14:70810168-70810178 -
  159. chr15:67255197-67255207 -
  160. chr18:23123743-23123753 -
  161. chr3:167476786-167476796 -
  162. chr4:889791-889801 -
  163. chr4:5132468-5132478 -
  164. chr7:154057694-154057704 -
  165. chr8:37985666-37985676 -
  166. chr8:131576200-131576210 -
  167. chrY:9228419-9228429 -
  168. chr1:5919679-5919689 -
  169. chr12:124379707-124379717 -
  170. chr13:104346402-104346412 -
  171. chr13:106784298-106784308 -
  172. chr14:74350708-74350718 -
  173. chr14:78944450-78944460 -
  174. chr15:66219945-66219955 -
  175. chr16:56886434-56886444 -
  176. chr16:58879167-58879177 -
  177. chr17:76390293-76390303 -
  178. chr2:191013994-191014004 -
  179. chr20:22343681-22343691 -
  180. chr3:165550527-165550537 -
  181. chr6:23903589-23903599 -
  182. chr6:123666881-123666891 -
  183. chr6:133506507-133506517 -
  184. chr7:42225279-42225289 -
  185. chr9:136583898-136583908 -
  186. chr15_GL383555v2_alt:323900-323910 -
  187. chrX:34943538-34943548 -
  188. chr1:203126613-203126623 +
  189. chr1:204684463-204684473 +
  190. chr14:18588445-18588455 +
  191. chr14:19167471-19167481 +
  192. chr15:78213534-78213544 +
  193. chr16:85391704-85391714 +
  194. chr20:64115330-64115340 +
  195. chr22:10861100-10861110 +
  196. chr22:15515502-15515512 +
  197. chr22:15890522-15890532 +
  198. chr22:39663716-39663726 +
  199. chr5:141639918-141639928 +
  200. chr20_KI270870v1_alt:20276-20286 +
  201. chr1:22766746-22766756 +
  202. chr7:66114802-66114812 +
  203. chrY:1452566-1452576 +
  204. chr1:32817192-32817202 +
  205. chr1:204298463-204298473 +
  206. chr11:76687856-76687866 +
  207. chr13:26972352-26972362 +
  208. chr14:74951708-74951718 +
  209. chr15:64460473-64460483 +
  210. chr4:2442043-2442053 +
  211. chr5:141476309-141476319 +
  212. chr6:7920030-7920040 +
  213. chr7:4716703-4716713 +
  214. chr8:30088203-30088213 +
  215. chr7_KI270805v1_alt:197820-197830 +
  216. chr5:697157-697167 +
  217. chr5:788483-788493 +
  218. chr10:44959579-44959589 -
  219. chr12:108496527-108496537 -
  220. chr16:56691250-56691260 -
  221. chr18:76412930-76412940 -
  222. chr7:148929644-148929654 -
  223. chr7:156541410-156541420 -
  224. chr9:63105791-63105801 -
  225. chr9:65857180-65857190 -

Sense Strand Reads

CCTTTGGGGTGCTTCAGGGGGCGCCGGGACGGGCGCCGTGCTTGGGTCGCCCGGGAAGGGTTGTGAGATTGAGCCCCCGAGGCCGCCGCGCTGTGCAGGCGTCCTTCCCGCAGGTTCCGGGTCCCCAGCCCAGGACAGGCGTGACCGAGTTGCCGGGTCAGTTGGTCTCCCTGGAGTGCCCAAGCTGAATCCACAGGGCCCAGCTGCCTTGCTTCTTGTTCCTTCTGCGAGCTGGTATTGAGCGCCTGCCACGAGCCAGGCCTTCCCTGGTGAAGATCACGGAATGCCCACCCAGGGAAGGGAGGCCTGGAGGCCTCCGGG
************************************************************************************************..............((.((...((((..((((....((((.(((.(((((.........)))))))).))))..))))...))))..))))************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139207
spleen		 SRR330906
skin		 SRR095854
brain		 SRR139182
liver		 SRR139219
thymus		 SRR553572
frontal-cortex		 SRR139168
brain		 SRR139170
heart		 SRR139176
kidney		 SRR139188
lung		 SRR139194
ovary		 SRR139199
placenta		 SRR139205
spleen		 SRR191610
breast		 SRR342894
heart		 SRR342900
heart		 RoviraIPAgo2
breast		 SRR139164
heart		 SRR139179
liver		 SRR139184
lung		 SRR139185
lung		 SRR139192
ovary		 SRR139206
spleen		 SRR191611
breast		 SRR330916
skin		 SRR330919
skin		 SRR342895
heart		 TAX577741
breast		 TAX577744
breast		 SRR342897
heart		 SRR330923
skin		 SRR039616
liver		 SRR330922
skin		 GSM450599
brain		 SRR330911
skin		 GSM532877
cervix		 SRR040012
cervix		 SRR330904
skin		 SRR330905
skin		 SRR330912
skin		 SRR553573
cerebellum
.......................................................................................................................................................................................................................................................................TCCCTGGTGAAGATC........................................... 15 0 6 15.00 90 30 0 0 12 12 0 6 12 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCT..................................................................................................................................................... 22 0 1 5.00 5 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCTG.................................................................................................................................................... 23 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCTGTT.................................................................................................................................................. 25 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGGTTCCGGGT....................................................................................................................................................................................................... 11 0 20 1.70 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTGCCGGGTCAGTTGGTCTCCCTGTT.................................................................................................................................................. 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCCCTGGAGTGCCCAAG......................................................................................................................................... 17 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................ATGCCCACCCAGGGA....................... 15 0 14 1.00 14 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................GCCCACCCAGGGAAGGG................... 17 0 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTGCCGGGTCAGTTGGTCTCCCTGA................................................................................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TCCCTGGTGAAGATCAC......................................... 17 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GTGCTTCAGGGGGCGCCGGGACGGGC............................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................GCCCACCCAGGGAAGG.................... 16 0 7 1.00 7 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCTGT................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTC........................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGTCCCCAGCCCAGGACAGGCGT................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CAGGGCCCAGCTGCCTTGCTTC.......................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GCCGGGTCAGTTGGTCT......................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGTTGCCGGGTCAGTTTGTCTCCCTGG................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................AGGCCTTCCCTGGTGAAGAT............................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GGACAGGCGTGACCGAGTTGCCGGGTCAGTT.............................................................................................................................................................. 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCTGA................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGCCTTGCTTCTTGTTCCTTCTGC............................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GCTGTGCAGGCGTCCTTCCCG................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GCGCCGAGACCGGCGCCGTG......................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGACCGAGTTGCCGGG.................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GGAATGCCCACCCAGGGAA...................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACAGGGCCCAGCTGCCTTGCT............................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTGCCGGGTCAGTTGGTCTCCCT..................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCCGGGTCAGTTGGTCTCCCTGTC.................................................................................................................................................. 25 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CGCCTGCCACG.................................................................... 11 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0
.....................CGACGGGACGGGCGCTGT.......................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................CCCGAGGCCG............................................................................................................................................................................................................................................ 10 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CTGGACGCGCGCCGTGC........................................................................................................................................................................................................................................................................................ 17 2 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................GGCGCCGTGC........................................................................................................................................................................................................................................................................................ 10 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................CCACCCAGGGAAGGGA.................. 16 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CCCGGAGGTTCCGGGT....................................................................................................................................................................................................... 16 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CGCCGCGCTGTGCCGACG............................................................................................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TATTGCTCGCCTGCCACG.................................................................... 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................CGGGCGCCGGGCTTTGGT.................................................................................................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................CGGGACGGGCG.............................................................................................................................................................................................................................................................................................. 11 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GGCGTGACCGA............................................................................................................................................................................. 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................CGCCGCGCCGTGGAGGCG............................................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................GGGGGCGCCGGG..................................................................................................................................................................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TGGGGTGCTTGAGTGGGCGAC........................................................................................................................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................GCGCGCCGGGCTTGGGTC................................................................................................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................GGCGCCGTGCTT...................................................................................................................................................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................CCCGGGAAGG...................................................................................................................................................................................................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CCAGGGAAGGGAGGC............... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGAAACCCCACGAAGTCCCCCGCGGCCCTGCCCGCGGCACGAACCCAGCGGGCCCTTCCCAACACTCTAACTCGGGGGCTCCGGCGGCGCGACACGTCCGCAGGAAGGGCGTCCAAGGCCCAGGGGTCGGGTCCTGTCCGCACTGGCTCAACGGCCCAGTCAACCAGAGGGACCTCACGGGTTCGACTTAGGTGTCCCGGGTCGACGGAACGAAGAACAAGGAAGACGCTCGACCATAACTCGCGGACGGTGCTCGGTCCGGAAGGGACCACTTCTAGTGCCTTACGGGTGGGTCCCTTCCCTCCGGACCTCCGGAGGCCC
**************************************************************************************************************************************..............((.((...((((..((((....((((.(((.(((((.........)))))))).))))..))))...))))..))))************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR039622
liver		 SRR039623
liver		 SRR139184
lung		 SRR139166
heart		 SRR139183
lung		 SRR139195
ovary		 SRR139207
spleen		 TAX577579
breast		 GSM450605
brain		 SRR330906
skin		 SRR330917
skin		 SRR342901
heart		 SRR330911
skin		 GSM450600
brain		 SRR342894
heart		 TAX577743
breast		 GSM450598
brain		 SRR095854
brain		 SRR342898
heart		 SRR330904
skin		 SRR330920
skin		 TAX577738
breast		 SRR342899
heart		 SRR040028
cervix		 SRR330923
skin		 SRR342895
heart		 SRR342896
heart		 SRR342900
heart		 SRR444061
skin		 SRR039620
liver		 SRR330908
skin		 SRR330913
skin		 SRR330921
skin		 TAX577741
breast		 TAX577745
breast
...................................................................................................................................................TCAGCGGCCCAGTCATCCAGCG........................................................................................................................................................ 22 3 2 1.50 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GGGTCGACGGAACGA............................................................................................................ 15 0 20 1.50 30 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TCAGCGGCCCAGTCATCCAG.......................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAACTCGGGGGCTCCGG............................................................................................................................................................................................................................................. 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGTCGACGGAACGAAGAACAAGGA.................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCCCCCGCGGCCCTG................................................................................................................................................................................................................................................................................................... 15 0 6 1.00 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CTGCCCGCGGCACGAAA..................................................................................................................................................................................................................................................................................... 17 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGACTTAGGTGTCCCG.......................................................................................................................... 16 0 5 1.00 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CCCCCGCGGC....................................................................................................................................................................................................................................................................................................... 10 0 20 0.60 12 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CCCATCGGGCCCTTCCCA.................................................................................................................................................................................................................................................................... 18 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................GCGACACGTCGGCAGGAGGGG.................................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CCCCCGCGGCCC..................................................................................................................................................................................................................................................................................................... 12 0 20 0.50 10 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................CAAACAGAGGGATCTCACGGGT........................................................................................................................................... 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CCCCCGCGGCC...................................................................................................................................................................................................................................................................................................... 11 0 20 0.30 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTAGGTGTCGCGGGGCGACGGA................................................................................................................ 22 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GGCGTCCAAG............................................................................................................................................................................................................ 10 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................CGGCACGAAACCAGCAGCCCC.......................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CAGCCCTGCGCCCGGCACGAAC..................................................................................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCGCGGCCCT.................................................................................................................................................................................................................................................................................................... 10 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0
.....................................TACGAACGCGGCGGGCCCTT........................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................CTGCCCGCCGGACCTCCGGAGA... 22 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CCGGATCGACGGAACGAA........................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CGTCCGCAGGAA....................................................................................................................................................................................................................... 12 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GCCCTGCCCGCGGC........................................................................................................................................................................................................................................................................................... 14 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGACGGGACGAAGAACAA..................................................................................................... 18 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GGCTCCGGCGCCGCGAC.................................................................................................................................................................................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................TCAGAGGGATCTCACGGGTT.......................................................................................................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................ACTGGCTCAA.......................................................................................................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................CCCCGCGGCCC..................................................................................................................................................................................................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................TAGCGGGCCTTTCCCAGCA................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................ACGTCCGCAGGAA....................................................................................................................................................................................................................... 13 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GGGCCCTTCCCATCA................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GGTGTCCCGGG........................................................................................................................ 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................GGGGTCGGGTCCTGTC....................................................................................................................................................................................... 16 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GGCCCAGTCA............................................................................................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................GCGGCACGCGCCCAGCGGGGC........................................................................................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................CCCGCGGCCCTGCCCCC.............................................................................................................................................................................................................................................................................................. 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCCCCCGCGG........................................................................................................................................................................................................................................................................................................ 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................CCCGCGGCCCTG................................................................................................................................................................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............TCCCCCGCGGC....................................................................................................................................................................................................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Generated: 04/21/2015 at 07:27 PM