ID:

emiR_60

 Coordinate:

chr12:123304494-123304715 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-22.5 -22.3 -22.1
mature
star
  1. chr1:91957989-91958003 -
  2. chr1:195909016-195909030 -
  3. chr12:5236572-5236586 -
  4. chr12:77488648-77488662 -
  5. chr12:123304520-123304534 -
  6. chr15:55778575-55778589 -
  7. chr15:101105110-101105124 -
  8. chr17:30986479-30986493 -
  9. chr18:10884568-10884582 -
  10. chr19:3875948-3875962 -
  11. chr20:14658897-14658911 -
  12. chr21:36422761-36422775 -
  13. chr3:17170565-17170579 -
  14. chr3:152969751-152969765 -
  15. chr4:5958664-5958678 -
  16. chr4:152639235-152639249 -
  17. chr5:95680047-95680061 -
  18. chr5:134932327-134932341 -
  19. chr6:111252022-111252036 -
  20. chrX:31419228-31419242 -

Sense Strand Reads

AGTGTGTATTATAAAATCTTTATATTTTGTCATTTTCTTTAAACAGATAAGGAACAACAAGAAAACTGCCATCTTAGTTAAAGAAGTGAATCCTAAAAAGAAACTTTTCTTAGTTTATCGACCAAATACTGGGAAGCAGCTCAAATTAGAAATTTATGCTGATCTAAAAAAGAAATATAAGAAGGTATTTTTTCATTTGTACATTATATTATATAGGAATACTTACTTTGGGCCAGGCAATGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTG
***************************************************************************************************************************************.((((..(((((...)))))..)))).................(((.((((((((((.....((((...))))......)))))))))).)))(((((((.......)))))))............************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR039623
liver		 SRR039622
liver		 SRR191590
breast		 SRR363674
fibroblast		 GSM450605
brain		 SRR039611
liver		 SRR094129
uterus		 SRR191405
breast		 SRR139207
spleen		 SRR039620
liver		 SRR039625
liver		 SRR139205
spleen		 SRR139215
thymus		 SRR330908
skin		 SRR330919
skin		 SRR342895
heart		 TAX577739
breast		 SRR342894
heart		 SRR342901
heart		 GSM450600
brain		 GSM450601
brain		 GSM450602
brain		 RoviraIPAgo2
breast		 SRR039613
liver		 SRR039616
liver		 SRR039619
liver		 SRR040010
cervix		 SRR040028
cervix		 SRR139177
liver		 SRR139186
lung		 SRR139202
spleen		 SRR139214
thymus		 SRR139216
thymus		 SRR191447
breast		 SRR191456
breast		 SRR191485
breast		 SRR191543
breast		 SRR191563
breast		 SRR191564
breast		 SRR191568
breast		 SRR191573
breast		 SRR191605
breast		 SRR191607
breast		 SRR191621
breast		 SRR330912
skin		 SRR330915
skin		 SRR330917
skin		 SRR342896
heart		 SRR342898
heart		 SRR342899
heart		 SRR363675
fibroblast		 SRR553575
Kidney		 TAX577453
breast		 TAX577590
breast		 SRR342900
heart		 TAX577589
breast		 TAX577745
breast		 TAX577738
breast		 SRR015448
breast
......................................................................................................................................................AATTTATGCTGATCTAAAAAAGA..................................................................................................................................................... 23 0 1 11.00 11 0 0 1 0 0 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTAAAAAAG...................................................................................................................................................... 22 0 1 10.00 10 0 0 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................AGGAACAACAAGAAAACTGCCA........................................................................................................................................................................................................................................................... 22 0 1 6.00 6 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTAAAAAA....................................................................................................................................................... 21 0 1 3.00 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGGAACAACAAGAAAACTGCCATCT........................................................................................................................................................................................................................................................ 25 0 1 3.00 3 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCCAGGCAATGTGGC............................................................................ 15 0 20 2.05 41 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTAAAAA........................................................................................................................................................ 20 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AAGGAACAACAAGAAAACTGCCA........................................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAAGGAACAACAAGAAAACTGCC............................................................................................................................................................................................................................................................ 24 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAAAAGAAATATAAGAAGG......................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................AAACTGCCATCTTAGTTAAA................................................................................................................................................................................................................................................ 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATTTATGCTGATCTAAAAAAGA..................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAATTTATGCTGATCTAAAAAAGA..................................................................................................................................................... 24 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AAGGAACAACAAGAAAACTGCC............................................................................................................................................................................................................................................................ 22 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AAAGAAGTGAATCCTAAAAAGA............................................................................................................................................................................................................................. 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAATTTATGCTGATCTAAAAAAG...................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TATGCTGATCTAAAAAAGAAA................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTAAAAAAGT..................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GAACAACAAGAAAACTGCCA........................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AAGGAACAACCAGAAAACTGCC............................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................ATCGACCAAATACTGGGAAGC......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAATTTATGCTGATCTAAAA......................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AAGGAACAACAAGAAAACTGCCATCTT....................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGGAACAACAAGAAAACTGCCATCTT....................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAACAAGAAAACTGCCATCTTA...................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTGCCATCTTAGTTAAAGA.............................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TACTGGGAAGCAGCTCAA.................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AATACTGGGAAGCAGCTCA................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................ACAACAAGAAAACTGCCATCTT....................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATAAGGAACAACAAGAAAACTGCC............................................................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAAAAGAAATATAAGAAGGTCGT..................................................................................................................................... 24 2 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................AGGAACAACAAGAAAACTGCCAT.......................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATAAGGAACAACAAGAAAACTGCCATCTTAGTT................................................................................................................................................................................................................................................... 34 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................TAAGGAACAACAAGAAAACTGC............................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TACTGGGAAGCAGCTCAAATTA.............................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................TACTGGGAAGCAGCTCAAAT................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................AAGGAACAACAAGAAAACTGCCATA......................................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................AAATAAGGAACAACAAGAAAACTGCC............................................................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAAGGAACAACAAGAAAACT............................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ACTGGGAAGCAGCTCAAATT............................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AGAAAACTGCCATCTTAGTTAAAGAAGTG.......................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGAACAACAAGAAAACTGCC............................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGGAACAACAAGAAAACTGC............................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAAGGAACAACAAGAAAACTG.............................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TGATAAGGAACAACAAGAAAAC................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAATACTGGGAAGCAGCTCAAATTA.............................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTATCGACCAAATACTGGGAAGCAGCTCAAATTAGA............................................................................................................................................................................ 36 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCTGATCTAAAAAAGAAATATAAGA............................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTA............................................................................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CAAGAAAACTGCCATCTT....................................................................................................................................................................................................................................................... 18 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................AATTTATGCTGATCTAACAAAG...................................................................................................................................................... 22 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATAAGGAACAACAAGAAAACTGT............................................................................................................................................................................................................................................................. 24 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............AAACCGTTACATTTTGTCATTTTC............................................................................................................................................................................................................................................................................................. 24 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................AGTGAATCCTAAAAAG.............................................................................................................................................................................................................................. 16 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAATACTTAATTTGGGCCA....................................................................................... 20 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGAAATTTATGCTGATCGG............................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCACACATAATATTTTAGAAATATAAAACAGTAAAAGAAATTTGTCTATTCCTTGTTGTTCTTTTGACGGTAGAATCAATTTCTTCACTTAGGATTTTTCTTTGAAAAGAATCAAATAGCTGGTTTATGACCCTTCGTCGAGTTTAATCTTTAAATACGACTAGATTTTTTCTTTATATTCTTCCATAAAAAAGTAAACATGTAATATAATATATCCTTATGAATGAAACCCGGTCCGTTACACCGAGTGTGGACATTAGAGTCGTGAAACCCTCCGGCTCCACCCGTCTAGTGGACTCCAGTCCTCAAGCTCTGGTCGGAC
*************************************************************.((((..(((((...)))))..)))).................(((.((((((((((.....((((...))))......)))))))))).)))(((((((.......)))))))............*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139180
liver		 SRR139219
thymus		 SRR139218
thymus		 SRR139190
lung		 SRR139201
placenta		 SRR039623
liver		 SRR330912
skin		 SRR330905
skin		 SRR342901
heart		 SRR553576
testes		 TAX577738
breast
...............................................................................................................................................................................................................................................................................................TCTAGTGGACTCCAGTCCTCAA............. 22 0 20 1218.40 24368 24368 0 0 0 0 0 0 0 0 0 0
....................................................TTGTTGTTCTTTTGA............................................................................................................................................................................................................................................................... 15 0 20 16.50 330 0 198 132 0 0 0 0 0 0 0 0
....................................................TTGTTGTTCTTTTGAC.............................................................................................................................................................................................................................................................. 16 0 18 1.00 18 0 0 0 18 0 0 0 0 0 0 0
...................................................CTTGTTGTTCTTTTGA............................................................................................................................................................................................................................................................... 16 0 8 1.00 8 0 0 0 0 8 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TCAAGCTCTGGTCGGA. 16 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0
.....................................................TGTTATTCTTTTGCCGGTCGAA....................................................................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................................AGTGTGGACATTAGAGTCGTGAAACCCTCC.............................................. 30 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................................................CGTCTAGTGGACTCCAGTCCTCAAGCTCTGGT..... 32 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................................................................................TCTAGTGGACTCCAGTCCTCAAG............ 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................CTCCGGCTCCACCCGTCTAGT............................. 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
....................................................TTGTTGTTCTTT.................................................................................................................................................................................................................................................................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Generated: 04/21/2015 at 07:00 PM