ID:

emiR_147

 Coordinate:

chr20:50737805-50738030 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.7 -32.4 -32.3
mature
  1. chr1:77501678-77501692 +
  2. chr1:84937076-84937090 +
  3. chr1:244680940-244680954 +
  4. chr11:7549601-7549615 +
  5. chr12:17732519-17732533 +
  6. chr12:60829619-60829633 +
  7. chr15:94860474-94860488 +
  8. chr16:4258413-4258427 +
  9. chr19:34639063-34639077 +
  10. chr2:56444135-56444149 +
  11. chr20:50737806-50737820 +
  12. chr22:11941522-11941536 +
  13. chr3:177295553-177295567 +
  14. chr4:20588908-20588922 +
  15. chr4:110643146-110643160 +
  16. chr4:156398055-156398069 +
  17. chr5:21631557-21631571 +
  18. chr5:82120642-82120656 +
  19. chr7:144710499-144710513 +
  20. chr9:16002177-16002191 +
star

Sense Strand Reads

AATACTTGCTCTGCTCGTTAATTTTTCTATGGCATGCATTTTCAAATTGGGTCCTTTTACTTTTTTTTTTTTTTTTAAGTAATATGTTTGTTACGTTTATAGTTTGGAGCTGAATTTCGTCGGTTTTCGCTGGAAAGATCAAAACCTGGAAAATTTGAGGAGTTTTATGGATTACTACAACATGTTCATAAGATCCCCAATGTTGACGTTTTGGTAGGCTATGCAGACATCCATGGAGACTTACTACCTATAAATAATGATGATAATTATCACAAAGCTGTTTCAACGGCCAATCCACTGCTTAGGATATTTATACAAAAGAAGGG
************************************.....((((((((((...........................((((((....)))))).....((((..((((((((......)))))))).))))............(((.((....)).))).(((((((((((...........))))))))))).)))))).))))..........************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total RoviraIPAgo2
breast		 SRR139219
thymus		 SRR553576
testes		 SRR139209
testes		 SRR139171
kidney		 SRR139210
testes		 TAX577579
breast		 SRR342895
heart		 SRR039623
liver		 SRR139208
testes		 SRR039622
liver		 SRR553575
Kidney		 TAX577745
breast		 GSM450608
brain		 SRR015446
breast		 SRR015448
breast		 SRR094132
uterus		 SRR139168
brain		 SRR139174
kidney		 SRR139175
kidney		 SRR139185
lung		 SRR139188
lung		 SRR139212
testes		 SRR139216
thymus		 SRR191586
breast		 SRR191590
breast		 SRR330919
skin		 SRR330922
skin		 SRR342897
heart		 TAX577453
breast		 TAX577739
breast		 TAX577742
breast		 SRR191399
breast		 GSM450601
brain		 SRR330916
skin		 GSM450607
brain		 SRR342894
heart		 GSM450599
brain
...................................................TCCTTTTACTTTTTT.................................................................................................................................................................................................................................................................... 15 0 20 10.75 215 0 215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGTTCATAAGATCCCCAAT............................................................................................................................. 20 0 1 4.00 4 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACATCCATGGAGACTTACTACCTATAAA........................................................................ 28 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAATGTTGACGTTTTGGTAGGCTATGCAGA................................................................................................... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATAAGATCCCCAATGTTGACGT..................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTTGACGTTTTGGTAGGCTATGCAGACATCCATG........................................................................................... 34 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCAAGTTTGGAGCTGAATTTCGTCGGT.......................................................................................................................................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGTTCATAAGATCCCCAATGTTG......................................................................................................................... 24 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AAATTTGAGGAGTTTTATGGAT.......................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AGTTTGGAGCTGAATTTCGTCGGTTTTCGCTGG................................................................................................................................................................................................. 33 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGAATTTCGTCGGTTTTCGCTGGAAA.............................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TATGGAGTTTGGAGCTGAATTTCGTCGGT.......................................................................................................................................................................................................... 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TTCAACGGCCAATCCACTGCTTAGGAT.................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGGAAAGATCAAAACCTGGAAAATTTGAGGAGTTT................................................................................................................................................................. 35 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AACCTGGAAAATTTGAGGAGTTTTATGGATT......................................................................................................................................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AGTTTGGAGCTGAATTTCGTCG............................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAGGAGTTTTATGGATTACT...................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TACAACATGTTCATAAGATCCCCAAT............................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................CTTACTACCTATAAATAATGATGAT.............................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGAGTTTTATGGATTACTACA................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AAGATCAAAACCTGGAAAAT............................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CGTTTATAGTTTGGAGCTGAATTTCGTCGGTTTT....................................................................................................................................................................................................... 34 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATGTTGACGTTTTGGTAGGCTATGCAGA................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATCAAAACCTGGAAAATTTGA........................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGAGTTTTATGGATTACTACAACATGT............................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGATTACTACAACATGTTCATAAGATC................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CCAATGTTGACGTTTTGGTAGGC........................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATGGATTACTACAACATGTTCAT......................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CAACATGTTCATAAGATCCCCAATGT........................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCTGAATTTCGTCGGTTTTCG..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGAATTTCGTCGGTTTT....................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GTCGGTTTTCGCTGG................................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGGAGCTGAATTTCGTCGGTTTTCGCTGGAA............................................................................................................................................................................................... 33 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAATGTTGACGTTTTGGTAGGCTATGCAGAC.................................................................................................. 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................CCACTGCTTAGGATATTTATACAAAAG..... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................CCACTGCTTAGGATATTT.............. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ATGATGATAATTATCACAAAGCTGTT............................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGGTAGGCTATGCAGACATCCATGGAGA....................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGAGTTTTATGGATTACTACAACATGTT............................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGACATCCATGGAGACTTACTA................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................ATCACAAAGCTGTTTCAACGG..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGTTGACGTTTTGGCAGGCTATGCAGA................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTTCGCTGGAAAGATCAAAACCTGGA................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGCTGAATTTCGTCGGTTTT....................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TCGCTGGAAAGATCAAAACCTG.................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAGTTTTATGGATTACT...................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TGTTCATAAGATCCCCAA.............................................................................................................................. 18 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCAAGTTTGGAGCTGAATTTCGTCGG........................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TACTACAACATGTTCATAAGATCCCC................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGTTGACGTTTTGGTAGGCTATGCAGA................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AAGATCAAAACCTGGAAAATTTGAGGA..................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCAAGTTTGGAGCTGAATTTCGTCGGTTTT....................................................................................................................................................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCTATGCAGACATCCATGGAGACTTA................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GGAGCTGAATTTCGTCGGTTTTCGCT................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TACAACATGTTCATAAGATCCCCAATGT........................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATTTGAGGAGTTTTATGGATT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTTTCGCTGGAAAGATCAAAACCTG.................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TAAGATCCCCAATGTTGACGTTTTGGTAGA............................................................................................................ 30 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CATAAGATCCCCAATGTTGACGTTT................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGCTGAATTTCGTCGGTTTTCGCTGGA................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGGGATCTGAATTTCGTCGGTTGT....................................................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................AGGATATTTATACAAAAG..... 18 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CCTATAAATAATGATGATAATTT......................................................... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................ATAATTATCACAAAGCTGTTTA.......................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AAAGTTGAGGGGTTTTATGGTTTA........................................................................................................................................................ 24 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................TTCGTCGGTTTTCGG.................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................TGGGAGCTGAATTCCGTGGGTTT........................................................................................................................................................................................................ 23 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TGAGTAATTTGTTTGTTGCGTTT.................................................................................................................................................................................................................................... 23 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................TTGAGGAGGATGATGGATTACT...................................................................................................................................................... 22 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................TGAATGTCGTCGGTT......................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................AGATCAAAACC.................................................................................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGAAGTTCGTCGGTT......................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TGAGTAATTAGTTTGTTACGT...................................................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTATGAACGAGACGAGCAATTAAAAAGATACCGTACGTAAAAGTTTAACCCAGGAAAATGAAAAAAAAAAAAAAAATTCATTATACAAACAATGCAAATATCAAACCTCGACTTAAAGCAGCCAAAAGCGACCTTTCTAGTTTTGGACCTTTTAAACTCCTCAAAATACCTAATGATGTTGTACAAGTATTCTAGGGGTTACAACTGCAAAACCATCCGATACGTCTGTAGGTACCTCTGAATGATGGATATTTATTACTACTATTAATAGTGTTTCGACAAAGTTGCCGGTTAGGTGACGAATCCTATAAATATGTTTTCTTCCC
**************************************************************************************************************.....((((((((((...........................((((((....)))))).....((((..((((((((......)))))))).))))............(((.((....)).))).(((((((((((...........))))))))))).)))))).))))..........************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR342894
heart		 TAX577744
breast		 SRR330911
skin		 TAX577589
breast		 SRR342898
heart		 TAX577579
breast		 SRR330916
skin		 GSM450610
brain		 SRR039619
liver		 SRR039621
liver		 SRR039622
liver		 SRR330923
skin		 SRR342897
heart		 SRR553575
Kidney		 TAX577738
breast
....................................................GGAAAATGAAAAAAA................................................................................................................................................................................................................................................................... 15 0 20 1.85 37 26 0 6 0 4 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................AGCGGTTACAACTGCACAACCAT.............................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCGGTTACAACTGCACGACCAT.............................................................................................................. 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCGGTTATAACTGCACAACCAT.............................................................................................................. 22 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................GGAAAATGAAAAAAAAAAA............................................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0
..................................................................................................................................................................................................GGGGTTATAACTGCACAACGAT.............................................................................................................. 22 3 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CCAAGTTGCCGGTTAGC.............................. 17 2 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................TGCCTGTTAGGTGTCGAAGC..................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................GTTAGGTGACGA........................ 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................TCTGATACGTCTGAAGGAACCT......................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................GAAAATGAAAAAAAAAAA............................................................................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................GGAAAATGAAAAAAAAAAAAGGAATAC....................................................................................................................................................................................................................................................... 27 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Generated: 04/21/2015 at 07:59 PM