ID:

emiR_131

 Coordinate:

chr2:111164662-111164885 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-13.4 -12.6 -12.6
mature
  1. chr1:190336807-190336821 +
  2. chr10:26706646-26706660 +
  3. chr11:33422498-33422512 +
  4. chr11:100294020-100294034 +
  5. chr14:71885963-71885977 +
  6. chr17:18203373-18203387 +
  7. chr17:42574753-42574767 +
  8. chr19:57231437-57231451 +
  9. chr2:111164753-111164767 +
  10. chr20:48099226-48099240 +
  11. chr22:45629473-45629487 +
  12. chr3:94627939-94627953 +
  13. chr4:89335700-89335714 +
  14. chr5:1873454-1873468 +
  15. chr6:167320867-167320881 +
  16. chr7:114461727-114461741 +
  17. chr8:72503563-72503577 +
  18. chr9:38447949-38447963 +
  19. chr9:126194577-126194591 +
  20. chrX:152157037-152157051 +
star

Sense Strand Reads

ATTAAAATTTTAAGAACCTACGGCCTATTCTCAGAGGATTATGTAACCCCTGCAGTGGAAACTGAGCCAGCTAACTTAAAAAGCTGCCTTAGTTTATTTTTAGAGATTACAGAATTTTTAAACAGGGAGACGTGTGATATACTCCCTCCCTTCCCTACTATTGCCTCTCTGACCTTTTTAAATTATTTTTAATACCAAAAGAGTTCTTTTGAAATGGAACTGATTAAAAGGGCAGAGGGTCTGTTGCCAGCCTGCATTGATATACCAGTCCCATTTGTAAATATTTACGTACCTTTATAAATTCAGTTGCATCTGTGGCAAAAT
********************************************************************************************........((((((......(((........((((((..((((...))))...))))))........)))...))))))********************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139176
kidney		 SRR553576
testes		 SRR139208
testes		 SRR139211
testes		 SRR139209
testes		 SRR039622
liver		 SRR139210
testes		 SRR039625
liver		 RoviraIPAgo2
breast		 SRR039623
liver		 SRR139201
placenta		 SRR139202
spleen		 SRR139203
spleen		 SRR139216
thymus		 SRR342901
heart		 SRR039620
liver		 SRR342894
heart		 SRR039611
liver		 SRR039616
liver		 SRR039621
liver		 SRR040028
cervix		 SRR094129
uterus		 SRR139180
liver		 SRR139184
lung		 SRR139186
lung		 SRR139195
ovary		 SRR139200
placenta		 SRR139205
spleen		 SRR139217
thymus		 SRR191565
breast		 SRR191590
breast		 SRR191629
breast		 SRR553575
Kidney		 TAX577741
breast		 TAX577745
breast		 TAX577743
breast		 SRR342897
heart
.............................................................................................................................................CTCCCTCCCTTCCCT........................................................................................................................................................................ 15 0 20 28.40 568 568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TACAGAATTTTTAAACAGGGAGACGT............................................................................................................................................................................................... 26 0 1 9.00 9 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCCTACTATTGCCTCTCTGA........................................................................................................................................................ 20 0 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0
....................................................................................TGCCTTAGTTTATTTTTAGAGATTACA..................................................................................................................................................................................................................... 27 0 1 4.00 4 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TACAGAATTTTTAAACAGGGAGACGTG.............................................................................................................................................................................................. 27 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TGTAACCCCTGCAGTGGAAACTGAGCC................................................................................................................................................................................................................................................................ 27 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TAGAGATTACAGAATTTTTAAACAGGG..................................................................................................................................................................................................... 27 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGCAGTGGAAACTGAGCCAGCTAACT........................................................................................................................................................................................................................................................ 26 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TGCCAGCCTGCATTGATATACCAGTCCCAT.................................................. 30 0 1 3.00 3 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGAAATGGAACTGATTAAAAGGGCA.......................................................................................... 25 0 1 3.00 3 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GAGATTACAGAATTTTTAAACAGGGA.................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTTTTGAAATGGAACTGATTAAAAGGGCAGAGGGTC................................................................................... 36 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCATTGATATACCAGT....................................................... 16 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GCAGTGGAAACTGAGCCAGATA........................................................................................................................................................................................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCCTACTATTGCCTCTCT.......................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TTTATAAATTCAGTTGCATCTGTGGC..... 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................ATTGCCTCTCTGACCTTTTT................................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................GCAGTGGAAACTGAGCCAGCTA........................................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GATATACTCCCTCCC.............................................................................................................................................................................. 15 0 4 2.00 8 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TACAGAATTTTTAAACAGGGAGACGTGTGA........................................................................................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................AACCCCTGCAGTGGAAACTGAGCCAGC............................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GGCCTATTCTCAGAGGAT............................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATTCAGTTGCATCTGTGGCAA... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................AACAGGGAGACGTGTGATATA....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TTATGTAACCCCTGCAGTGGAAACTGAGCCAGC............................................................................................................................................................................................................................................................. 33 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................TGGAACTGATTAAAAGGGCAGAGGGTC................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGGAACTGATTAAAAGGGC........................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TAAGAACCTACGGCCTAT........................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GATTAAAAGGGCAGAGGGT.................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGAAATGGAACTGATTAAAAGGGCAGAGGG..................................................................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GCAGTGGAAACTGAGCCAGGTA........................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GAAACTGAGCCAGCTAACTTA...................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................TAACCCCTGCAGTGGAAACTGAGCCAGC............................................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGGAAACTGAGCCAGCTAACTTAAA.................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TATTCTCAGAGGATTATGT........................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................TACGGCCTATTCTCAGAGGATTATGTA....................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CCAGCCTGCATTGATATACCAGTCCCA................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAGTTTATTTTTAGAGATTACAGA................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACGGCCTATTCTCAGAGGATG............................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTAAGAACCTACGGCCTA......................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AACTGAGCCAGCTAACTTAA..................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AATGGAACTGATTAAAA............................................................................................... 17 0 6 1.00 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TACAGAATTTTTAAACAGGGAGAC................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTACAGAATTTTTAAACAGGGAGA.................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TGCCAGCCTGCATTGATATACCAG........................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GGCCTATTCTCAGAGGATT............................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CCTTCCCTACTATTGCCTCT............................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTAAGAACCTACGGCCTATTCT..................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGAGATTACAGAATTTTTA............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AACTGAGCCAGCTAACTTAAA.................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAAGAGTTCTTTTGAAATGGA.......................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................GATATACTCCCTCCCTTC........................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTAAGAACCTACGGCCTAT........................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGGAAACTGAGCCAG.............................................................................................................................................................................................................................................................. 15 0 16 1.00 16 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGATATACCAGTCCCATTT................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CCTGCATTGATATACCAGT....................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TGCATTGATATACCAGTCCCATTTGT.............................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGATTATGTAACCCCTGCAGTGGAAA....................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................ACCTTTATAAATTCAGTTGCAT............ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TGCCAGCCTGCATTGA................................................................ 16 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGGGAGACGTGTGATATA....................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGCAGTGGAAACTGAGCCAGCTAAC......................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GAGATTACAGAATTTTTAAACAGGGAGACGT............................................................................................................................................................................................... 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CAGAGGGTCTGTTGCCAGCCTGCATT.................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CAGAGGATTATGTAACCCCT................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGAGAATTTTTAAACAGGGAGACGT............................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................AGCCTGCATTGATATACCAGTCCC.................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TATTTTTAGAGATTATAGAATTTTTA............................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TCCGGCCTATTCTCATCGGATT............................................................................................................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................ATTGTCAGAGGATTATGTA....................................................................................................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAAAAGGGCAGAGGGTAT.................................................................................. 18 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTAAAAGGGCAGA........................................................................................ 13 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGATTATGTA....................................................................................................................................................................................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................CGTGTGATATA....................................................................................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAATTTTAAAATTCTTGGATGCCGGATAAGAGTCTCCTAATACATTGGGGACGTCACCTTTGACTCGGTCGATTGAATTTTTCGACGGAATCAAATAAAAATCTCTAATGTCTTAAAAATTTGTCCCTCTGCACACTATATGAGGGAGGGAAGGGATGATAACGGAGAGACTGGAAAAATTTAATAAAAATTATGGTTTTCTCAAGAAAACTTTACCTTGACTAATTTTCCCGTCTCCCAGACAACGGTCGGACGTAACTATATGGTCAGGGTAAACATTTATAAATGCATGGAAATATTTAAGTCAACGTAGACACCGTTTTA
*********************************************************************************************************************************************************........((((((......(((........((((((..((((...))))...))))))........)))...))))))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139207
spleen		 SRR139168
brain		 SRR139201
placenta		 SRR139202
spleen		 SRR039623
liver		 SRR363673
fibroblast		 SRR037876
fibroblast		 SRR342899
heart		 GSM450608
brain		 SRR342894
heart		 TAX577743
breast		 SRR342897
heart		 GSM450609
brain		 GSM450610
brain		 SRR330905
skin		 SRR342898
heart		 TAX577741
breast		 TAX577744
breast
.........................................................................................................................................................................ACTGGAAAAATTTAA............................................................................................................................................ 15 0 20 1.50 30 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GTCACCTTTGACTCGGT............................................................................................................................................................................................................................................................... 17 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................GCATGGAAATATTTAA..................... 16 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCCCTCTGCACACTA.......................................................................................................................................................................................... 15 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAAAATATGGTTTTCTCA........................................................................................................................ 19 1 5 0.80 4 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAAAATATGGTTTTCTCA........................................................................................................................ 18 1 20 0.30 6 0 0 0 0 2 0 0 0 0 0 2 0 1 0 0 0 1 0
..........................................................................................................................................TATGCTGGAGGGAAGGGATGTT.................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCTCAAGAAAACTTAAGCTTG........................................................................................................ 22 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CGAAGGGATGCTAACGGAG............................................................................................................................................................. 19 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................GGATGCCGGATA........................................................................................................................................................................................................................................................................................................ 12 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............TGGATGCCGGAT......................................................................................................................................................................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAATTATGGTTTTCTCA........................................................................................................................ 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................GTCTCAAGAAAACTTTAC............................................................................................................ 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................ATAATTATGGTTTTCTCA........................................................................................................................ 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................CCATATGAGGCAGGGAAG........................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................GATAAGAGTCTCCT.............................................................................................................................................................................................................................................................................................. 14 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Generated: 04/21/2015 at 07:53 PM