ID:

eca-mir-95

 Coordinate:

chr3:115690378-115690458 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-11.1 -10.8 -10.8

Sense Strand Reads

ATGGGACGTCCGGCTGTAGCGCGCCCGAGGAAGGTAGGATTGTGACGCTCAtgtgtGTGGGgGgTgttTtttTGTTTGTTGttTTGAGATGCGTTAAtTTgttgGGGTgTTTtTTGtGgttggtgTgTGTGggtGtgGgTGTGgGGGGgGggGtGGGGGtGtggtgGttGtgttGtGgtGg

***********************************........(((((((..........((.(((((((...............))))))).)).........)))))))...................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................TTCAACGGGTCTTTATTGAGC.............................................................. 21 0 1 277.00 277 277
..................................................................................................TTCAACGGGTCTTTATTGAGCA............................................................. 22 0 1 37.00 37 37
..................................................................................................TTCAACGGGTCTTTATTGAGCT............................................................. 22 1 1 36.00 36 36
..................................................................................................TTCAACGGGTCTTTATTGAGCAT............................................................ 23 1 1 15.00 15 15
..................................................................................................TTCAACGGGTCTTTATTGAGCAA............................................................ 23 0 1 11.00 11 11
..................................................................................................TTCAACGGGTCTTTAT................................................................... 16 0 1 6.00 6 6
...................................................................................................TCAACGGGTCTTTATTGAGC.............................................................. 20 0 1 2.00 2 2
..................................................................................................TTCAACGGGTCTTTATGGAGC.............................................................. 21 1 1 2.00 2 2
..................................................................................................TTCAACGGGTCTTTATTGAGA.............................................................. 21 1 1 2.00 2 2
.................................................................................................ATTCAACGGGTCTTTATTGAGC.............................................................. 22 0 1 2.00 2 2
..................................................................................................TTCAACGGGTCTTTATTGAGCTT............................................................ 23 2 4 1.75 7 7
..................................................................................................TTCAACGGGTCTTTTTTGAGC.............................................................. 21 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCGTTATTGAGC.............................................................. 21 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATAGAGCT............................................................. 22 2 1 1.00 1 1
..................................................................................................TTCAACGGGGCTTTATTGACC.............................................................. 21 2 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTA.................................................................... 15 0 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATT.................................................................. 17 0 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATTGAGCAC............................................................ 23 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATTGAGCAG............................................................ 23 1 1 1.00 1 1
..................................................................................................TTCAACGGGGCTTTATTGAGC.............................................................. 21 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATTGAGT.............................................................. 21 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTGTATTGAGC.............................................................. 21 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATTGA................................................................ 19 0 1 1.00 1 1
..................................................................................................TTCAACGGGTCGTTATTGAGCA............................................................. 22 1 1 1.00 1 1
..................................................................................................TTCAACGGGTCTTTATTGATC.............................................................. 21 1 1 1.00 1 1
........TCCGGCTGTAGCGCGCCCGAGGAAGGTAGGT.............................................................................................................................................. 31 1 1 1.00 1 1
..................................................................................................TTCAACGGGCCTTTATTGAGCAT............................................................ 23 2 3 0.33 1 1
..................................................................................................TTCAACTGGGCTTTATTGAGC.............................................................. 21 2 6 0.17 1 1
..................................................................................................TTCAACGGGTCTTTATGGAGCTT............................................................ 23 3 7 0.14 1 1
..................................................................................................TTCAACCGGGCTTTATTGAGC.............................................................. 21 2 7 0.14 1 1
..................................................................................................TTCAACGGGTGTTTATTGAGC.............................................................. 21 1 11 0.09 1 1
..................................................................................................TTCAACGGGTATTTATTGAGC.............................................................. 21 1 13 0.08 1 1

Anti-sense strand reads

TACCCTGCAGGCCGACATCGCGCGGGCTCCTTCCATCCTAACACTGCGAGTtgtgtCACCCgCgAgttAtttACAAACAACttAACTCTACGCAATTtAAgttgCCCAgAAAtAACtCgttggtgAgACACggtCtgCgACACgCCCCgCggCtCCCCCtCtggtgCttCtgttCtCgtCg

***********************************........(((((((..........((.(((((((...............))))))).)).........)))))))...................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:00 PM