ID:

eca-mir-9177

 Coordinate:

chr19:35753045-35753171 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.4 -37.4 -37.0

Sense Strand Reads

GCTGGGTAGAGAGAAGTTCTGCTGGGATTGGCTGCCTTAACTGGTGAGAGATGCAGAAACCGTTACTTACAGGAACACCATCCTGCTTTGCTCCCACTTTGTCCTGTGGCCTGATTACCAGGAGCAGTGGGTGCAGACAGGCTGGCACTCTTGGGATCAGCTTTCTGCTGAAGCTACCTGTTCCGGTGGAAAACAACATCTAACATCCACCACCTCCCAGCCCTCCT

*******************************************************************..(((((...(((.((((.(((((.((((((...(((((............)))))..)))))).))))))))).)))...)))))....********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................CTGCTTTGCTCCCACTTTGTCCTG......................................................................................................................... 24 0 1 2.00 2 2
.........................................................................................................................GAGCAGTGGGTGCAGACAGGC..................................................................................... 21 0 1 2.00 2 2
..................................................................................CTGCTTTGCTCCCACTTTGTCCT.......................................................................................................................... 23 0 1 2.00 2 2

Anti-sense strand reads

CGACCCATCTCTCTTCAAGACGACCCTAACCGACGGAATTGACCACTCTCTACGTCTTTGGCAATGAATGTCCTTGTGGTAGGACGAAACGAGGGTGAAACAGGACACCGGACTAATGGTCCTCGTCACCCACGTCTGTCCGACCGTGAGAACCCTAGTCGAAAGACGACTTCGATGGACAAGGCCACCTTTTGTTGTAGATTGTAGGTGGTGGAGGGTCGGGAGGA

**********************************************************************..(((((...(((.((((.(((((.((((((...(((((............)))))..)))))).))))))))).)))...)))))....******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................CACGTCTGTCCGACC.................................................................................. 15 0 19 0.05 1 1

Generated: 09/01/2015 at 11:47 AM