ID:

eca-mir-9162

Coordinate:

chr14:34117748-34117886 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.6 -36.1 -36.0

Sense Strand Reads

CCTCACTGGGACCTTAGCAGGTCCTGCTTATTCTAAAATGTCAAGGCTTCTAACCTTAGCAGCAGCCTCCATAAAATAGCCCTAGCACCCAGAGTCCAAGCAGCTGCAGACAGAATCGTAAAGGCCTCCCTGCAGATGACTGGACTCCAGGCGCTCCTGGCTGCAACAGGTTGCCGTGGCTGTGGGGAGCCACATTTTCTGGCTTGCAAAAATAATAAGGCCCTGCCAACTTCTTTGTG

**************************************************************************..(((((..(((.((..(((((((..((.((((((..((..((.....)).))..)))))).))..)))))))..)).)))...))))).***************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................................CAGAGTCCAAGCAGCTGCAGAC................................................................................................................................ 22 0 1 3.00 3 3
...............................................................................................................................CCCTGCAGATGACTGGACTCCA.......................................................................................... 22 0 1 1.00 1 1

Anti-sense strand reads

GGAGTGACCCTGGAATCGTCCAGGACGAATAAGATTTTACAGTTCCGAAGATTGGAATCGTCGTCGGAGGTATTTTATCGGGATCGTGGGTCTCAGGTTCGTCGACGTCTGTCTTAGCATTTCCGGAGGGACGTCTACTGACCTGAGGTCCGCGAGGACCGACGTTGTCCAACGGCACCGACACCCCTCGGTGTAAAAGACCGAACGTTTTTATTATTCCGGGACGGTTGAAGAAACAC

***************************************************************************..(((((..(((.((..(((((((..((.((((((..((..((.....)).))..)))))).))..)))))))..)).)))...))))).**************************************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:41 AM