ID:

eca-mir-9160

Coordinate:

chr14:47959181-47959319 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-71.9 -71.5 -71.4
mature

  1. eca-mir-9160  chr14:47959221-47959242 -
  2. chr14:47959258-47959279 +
star

Sense Strand Reads

CCGAGTTTGAGGGAGCTCACTTCTGCGTCCACCACCCTGGCTGGCCTCCGTTTGTTCTCTCCATTCCCTCTTTGACCAAGGTCATACATAAGCACGATAACAGGCTCTTGGAAAACTAGATCAGTTTTCCAAGAGCCTGTTATCGTGCTTATGTACTAACACCATCCTAGACCCTATGGTCAATAGAAAAATCAATAAGGATTCTCACCCCACCCTAGAGCTCTCACACTGAAGAGCTA

***********************************..................(((((..........((((((((((.((((.(((((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))))))..............))))...))))))).)))..........)))))..***********************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................TCCAAGAGCCTGTTATCGTGCT.......................................................................................... 22 0 2 1.00 2 2

Anti-sense strand reads

GGCTCAAACTCCCTCGAGTGAAGACGCAGGTGGTGGGACCGACCGGAGGCAAACAAGAGAGGTAAGGGAGAAACTGGTTCCAGTATGTATTCGTGCTATTGTCCGAGAACCTTTTGATCTAGTCAAAAGGTTCTCGGACAATAGCACGAATACATGATTGTGGTAGGATCTGGGATACCAGTTATCTTTTTAGTTATTCCTAAGAGTGGGGTGGGATCTCGAGAGTGTGACTTCTCGAT

***********************************..................(((((..........((((((((((.((((.(((((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))))))..............))))...))))))).)))..........)))))..***********************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TCGTGCTATTGTCCGAGAACCT............................................................................................................................... 22 0 2 1.00 2 2

Generated: 09/01/2015 at 11:43 AM