ID:

eca-mir-9146

 Coordinate:

chr15:70755504-70755616 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.3 -51.9 -51.9

Sense Strand Reads

GAGGATCTCTTCCTGTACGCAACAGGTGCAAAGGGCAGGGCAAGGAGTGTGGGCGCCAAGGCTGAGCTGCCTTCCTCCTGGATCCACTCCGTCCACCTGGAAGAGTCTGTCATGCTTCCTCCTGGGCAGGAACTGGGATTCGAGCAGGCGGTTGTGAATGGTGGAGGAGGTACACCTTTCTGGAAGGGGCCCCACCTGCACACCCTTCTGGAT

***********************************..(((..(((((...((((((((....)).)).))))..)))))...))).((((.((((((......((.(((((.(((((..((((((.......))))))...))))))))))))......)))))))))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....TCTCTTCCTGTACGCAACAGGTGCAAAGGGC................................................................................................................................................................................. 31 0 1 3.00 3 3
..........TCCTGTACGCAACAGGTGCAAAGGGC................................................................................................................................................................................. 26 0 1 2.00 2 2
.......................................................................TTCCTCCTGGATCCACTCCGTCCACCTGGATA.............................................................................................................. 32 2 1 1.00 1 1
...................................................................TGCCTTCCTCCTGGATCCACTCCGTCA....................................................................................................................... 27 1 1 1.00 1 1
.................................................................................................TGGAAGAGTCTGTCATGCTTCCTCCTGGGC...................................................................................... 30 0 1 1.00 1 1
......................................................................................................................CTCCTGGGCAGGAACTGGGATTCGAGTA................................................................... 28 1 1 1.00 1 1
..........................................................................................................................TGGGCAGGAACTGGGATTCGAGCAGGC................................................................ 27 0 1 1.00 1 1
.........TTCCTGTACGCAACAGGTGCAAAGGGCAGT.............................................................................................................................................................................. 30 1 1 1.00 1 1
...........................................................................TCCTGGATCCACTCCGTCCACCTGAAA............................................................................................................... 27 1 1 1.00 1 1
.......................................................................................TCCGTCCACCTGGAAGAGTTTGTCATGCT................................................................................................. 29 1 1 1.00 1 1

Anti-sense strand reads

CTCCTAGAGAAGGACATGCGTTGTCCACGTTTCCCGTCCCGTTCCTCACACCCGCGGTTCCGACTCGACGGAAGGAGGACCTAGGTGAGGCAGGTGGACCTTCTCAGACAGTACGAAGGAGGACCCGTCCTTGACCCTAAGCTCGTCCGCCAACACTTACCACCTCCTCCATGTGGAAAGACCTTCCCCGGGGTGGACGTGTGGGAAGACCTA

***********************************..(((..(((((...((((((((....)).)).))))..)))))...))).((((.((((((......((.(((((.(((((..((((((.......))))))...))))))))))))......)))))))))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:43 AM