ID:

eca-mir-9143

 Coordinate:

chrX:115803288-115803408 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-21.2 -21.1 -21.0

Sense Strand Reads

TTTGTCATAATAAGATGGATTATGTTTTCTGACCAATTTTAGATCACCAAACTATTTCCTCTTTGGTTGGTACATTTGACCCTGAAGACAAtTgTGTGtTGgtGtTGTttTgtTtTTgTgTGgtggGTtGGTTTGTTGTgtGGGTTtttTGGGgTtgTTTtgtTGGtttgttgTtGgttGTTGgTtGgTGGtgtTGgtttTttGgtgtgtGTGtttGTTtt

***********************************....(((((((.((((..((..((((.........((((((((((((..((((((((...........)))))))).............)))))))......)))))........))))..)))))).)))))))................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
........................................................................................................................TGCACCGTAGGTTTGTTGTCA................................................................................ 21 0 1 8.00 8 8
......................................................................................................................TCTGCACCGTAGGTTTGTTGTC................................................................................. 22 0 1 8.00 8 8
........................................................................................................................TGCACCGTAGGTTTGTTGTC................................................................................. 20 0 1 7.00 7 7
....................................................................................AAGACAAATCTATGATGCAGA.................................................................................................................... 21 1 2 3.00 6 6
........................................................................................................................TGCACCGTAGGTTTGTTGTCT................................................................................ 21 1 1 2.00 2 2
....................................................................................AAGACAAATCTATGATGCAGAT................................................................................................................... 22 1 1 2.00 2 2
...........................................................................................................TAATCATATTCTCTGCACCGTAGGTTTGTTGTC................................................................................. 33 0 1 1.00 1 1
....................................................................................AAGACAAATCTATGATGCAGATGT................................................................................................................. 24 1 1 1.00 1 1
......................................................................................................................TCTGCACCGGAGGTTTGTTGTC................................................................................. 22 1 1 1.00 1 1
....................................................................................CAGACAAATCTATGATGCAGATG.................................................................................................................. 23 2 2 0.50 1 1
........................................................................................................................TGCACCGTAGGTTTGTTGTAC................................................................................ 21 2 2 0.50 1 1
....................................................................................AAGACAAATCTATGATGCAGAA................................................................................................................... 22 2 13 0.15 2 2
....................................................................................AAGACAAATCTATGATGCAGT.................................................................................................................... 21 2 9 0.11 1 1

Anti-sense strand reads

AAACAGTATTATTCTACCTAATACAAAAGACTGGTTAAAATCTAGTGGTTTGATAAAGGAGAAACCAACCATGTAAACTGGGACTTCTGTTtAgACACtACgtCtACAttAgtAtAAgAgACgtggCAtCCAAACAACAgtCCCAAtttACCCgAtgAAAtgtACCtttgttgAtCgttCAACgAtCgACCtgtACgtttAttCgtgtgtCACtttCAAtt

***********************************....(((((((.((((..((..((((.........((((((((((((..((((((((...........)))))))).............)))))))......)))))........))))..)))))).)))))))................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:14 PM