ID:

eca-mir-9142

 Coordinate:

chrX:115885618-115885738 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-20.8 -20.8 -20.8

Sense Strand Reads

TTACGTTATGATAATATAATACCTTTGCTTCTCTGTTGCTTTTCAGGATCCAAAGTATCTTCATTTGTCTTCTTGCTGATCCTCAGGACAAATCTATGTTGATGAATTAGTAAGGGATTCAGTAAgtgGGtTTTGTgtTGtGGGTtttTGtGttttTgTtgtTtGttGgggggtGTttttTtTtTGgTtTtTtttTttGGtGCAGAGTATCGTGTCGTATT

*********************************************************************........(((((.(((.((((((((((.....((((((.......))))))....))))).))))).))).)))))..........***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................................AGGACAAATCTATGTTGATGAA................................................................................................................... 22 0 1 1.00 1 1
.......................................................................................................................CAGTAACACGGATTTGTCATGA................................................................................ 22 0 1 1.00 1 1
......................................................................................................................TCAGTAACACGGATTTGTCAT.................................................................................. 21 0 1 1.00 1 1
.......................................................................................................................CAGTAACACGGATTTGTCATGAA............................................................................... 23 1 1 1.00 1 1

Anti-sense strand reads

AATGCAATACTATTATATTATGGAAACGAAGAGACAACGAAAAGTCCTAGGTTTCATAGAAGTAAACAGAAGAACGACTAGGAGTCCTGTTTAGATACAACTACTTAATCATTCCCTAAGTCATTgtgCCtAAACAgtACtCCCAtttACtCttttAgAtgtAtCttCgggggtCAttttAtAtACgAtAtAtttAttCCtCGTCTCATAGCACAGCATAA

*****************************************************************........(((((.(((.((((((((((.....((((((.......))))))....))))).))))).))).)))))..........********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:17 PM