ID:

eca-mir-9141

 Coordinate:

chr13:40697020-40697164 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.5 -45.4 -45.4

Sense Strand Reads

CGCCACTGAGCTTCCACTGGGCCTGCGTGGCCTCAACACAGGTCAGCTGTGTGGCAGCACAGGGGGCTGTCCTCCCTCCCCTCAGTCATTGGACTAATGAGCCCAGCAGGGTCCTGGGGTCCACCTGATGTCTGAGTGCTTTGTGGGCTTGGTCCCAGCAGGAGGAGGGGGTCTCCCCAGCTGTCCCCTGGCCAGGCTCTGCTTTGAGGCCAGGCTGGCTTCTCACCACCCCCTTGTTGTGGGCT

******************************************************************.....(((((((((((..((....(((((...(((((((.((((((.((.(((((.....)))..)).)).))))))))))))))))))..))))).)))))))).....********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................TCTGAGTGCTTTGTGGGCTTGGTCCCAGCAG.................................................................................... 31 0 1 1.00 1 1
.................................................................................TCAGTCATTGGACTAATGAGCCCAGC.......................................................................................................................................... 26 0 1 1.00 1 1

Anti-sense strand reads

GCGGTGACTCGAAGGTGACCCGGACGCACCGGAGTTGTGTCCAGTCGACACACCGTCGTGTCCCCCGACAGGAGGGAGGGGAGTCAGTAACCTGATTACTCGGGTCGTCCCAGGACCCCAGGTGGACTACAGACTCACGAAACACCCGAACCAGGGTCGTCCTCCTCCCCCAGAGGGGTCGACAGGGGACCGGTCCGAGACGAAACTCCGGTCCGACCGAAGAGTGGTGGGGGAACAACACCCGA

*********************************************************************.....(((((((((((..((....(((((...(((((((.((((((.((.(((((.....)))..)).)).))))))))))))))))))..))))).)))))))).....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
........................................................................................................TCGTCCCAGGACCCCAGGTGGACTACAGAC............................................................................................................... 30 0 1 1.00 1 1
....................................GTGTCCAGTCGACACACCGTCGTGTCCCC.................................................................................................................................................................................... 29 0 1 1.00 1 1
...............................................................................................................AGGACCCCAGGTGGACTACAGACTCACGA......................................................................................................... 29 0 1 1.00 1 1

Generated: 09/01/2015 at 11:40 AM