ID:

eca-mir-9137

 Coordinate:

chr13:19076028-19076168 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-24.8 -24.6 -24.5

Sense Strand Reads

ACATAGCCCCCCAGACCTTTTGTACATTTTTACAGGGGTGCCCCTCCCAATAATCCCCCTTTCTGGTTAATTAAATCCTCAGACTGGTGCTGTGTTCCTAGCCTCTGGCCTCTCTGTGGGGAGGGGGGACTACCGGGGGAAGGTAGGAACCCAGGGCTTATCCCTGGGAATGTGGGGTCCAGCAGGAGGCAGACCAGCAGAGGAAGGGACCTGGGTACCTAGGCTGGAAAGAAGGGCAAAT

********************************************..........(((((((((.............((.((((..(((((((......)))).....)))..)))).)))))))))))***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................TTTCTGGTTAATTAAATCCTCAGACT............................................................................................................................................................ 26 0 1 13.00 13 13
...................................................................TAATTAAATCCTCAGACTGGTGCTG..................................................................................................................................................... 25 0 1 12.00 12 12
..............................................................................TCAGACTGGTGCTGTGTTCCTAGCCT......................................................................................................................................... 26 0 1 12.00 12 12
....................................................................................TGGTGCTGTGTTCCTAGCCTCTGGCCTC................................................................................................................................. 28 0 1 11.00 11 11
....................................................................................TGGTGCTGTGTTCCTAGCCTCTGGCCT.................................................................................................................................. 27 0 1 11.00 11 11
...................................................................TAATTAAATCCTCAGACTGGTGCTGT.................................................................................................................................................... 26 0 1 5.00 5 5
..............................................................................TCAGACTGGTGCTGTGTTCCTAGCC.......................................................................................................................................... 25 0 1 5.00 5 5
...............................................................TGGTTAATTAAATCCTCAGACTGGTGC....................................................................................................................................................... 27 0 1 5.00 5 5
...............................................................................CAGACTGGTGCTGTGTTCCTAGCCTCTGGCCT.................................................................................................................................. 32 0 1 4.00 4 4
...................................................................TAATTAAATCCTCAGACTGGTGCT...................................................................................................................................................... 24 0 1 4.00 4 4
............................................................TTCTGGTTAATTAAATCCTCAGACT............................................................................................................................................................ 25 0 1 3.00 3 3
.......................................................................................TGCTGTGTTCCTAGCCTCTGGCCT.................................................................................................................................. 24 0 1 3.00 3 3
...........................................................................TCCTCAGACTGGTGCTGTGTTCCTAGCC.......................................................................................................................................... 28 0 1 3.00 3 3
.............................................................TCTGGTTAATTAAATCCTCAGACTGGTGC....................................................................................................................................................... 29 0 1 3.00 3 3
.......................................................................TAAATCCTCAGACTGGTGCTGTGTTCCTAGCCT......................................................................................................................................... 33 0 1 2.00 2 2
..............................................................................TCAGACTGGTGCTGTGGTCCTAGCCTCTGGCCT.................................................................................................................................. 33 1 1 2.00 2 2
....................................................................................TGGTGCTGTGTTCCTAGCCTCTGGCC................................................................................................................................... 26 0 1 2.00 2 2
............................................................................CCTCAGACTGGTGCTGTGTTCCTAGCC.......................................................................................................................................... 27 0 1 2.00 2 2
...................................................................................CTGGTGCTGTGTTCCTAGCCTCTGGCCTC................................................................................................................................. 29 0 1 2.00 2 2
...........................................................................................................................................................................................GGCAGACCAGCAGAGGAAGGGACCT............................. 25 0 1 2.00 2 2
..................TTTGTACATTTTTACAGGGGTGCC....................................................................................................................................................................................................... 24 0 1 1.00 1 1
..............................................................................TCAGACTGGTGCTGGGTTCCTAGCCTCTGGCCT.................................................................................................................................. 33 1 1 1.00 1 1
.......................................................................TAAATCCTCAGACTGGTGCTGTGTTCCTAGC........................................................................................................................................... 31 0 1 1.00 1 1
............................................................................CCTCAGACTGGTGCTGTGTTCCTAGCCT......................................................................................................................................... 28 0 1 1.00 1 1
.................................................................................GACTGGTGCTGTGTTCCTAGCCTCTGGCC................................................................................................................................... 29 0 1 1.00 1 1
..................................................................TTAATTAAATCCTCAGACTGGTGCTG..................................................................................................................................................... 26 0 1 1.00 1 1
...........................................................................TCCTCAGACTGGTGCTGTGTTCCTAGCCT......................................................................................................................................... 29 0 1 1.00 1 1
............................................................TTCTGGTTAATTAAATCCTCAGACTGGTGC....................................................................................................................................................... 30 0 1 1.00 1 1
...........................................................TTTCTGGTTAATTAAATCCTCAGACTGGTGCT...................................................................................................................................................... 32 0 1 1.00 1 1
...................................................................................CTGGTGCTGTGTTCCTAGCCTCTGGCC................................................................................................................................... 27 0 1 1.00 1 1
.......................................................................................TGCTGTGTTCCTAGCCTCTGGCCTA................................................................................................................................. 25 1 1 1.00 1 1
.................................................................................GACTGGTGCTGTGTTCCTAGCCTCTGGCCTC................................................................................................................................. 31 0 1 1.00 1 1
..............................................................................TCAGACTGGTGCTGTGTTCCTAGC........................................................................................................................................... 24 0 1 1.00 1 1
....................................................................................TGGTGCTGTGTTCCTAGCCTCTGGCCTCT................................................................................................................................ 29 0 1 1.00 1 1
..............................................................................TCAGACTGGTGCTGTGTTCCTAGCCTCTGGCCT.................................................................................................................................. 33 0 1 1.00 1 1
..............................................................................TCAGACCGGGGCTGTGTTCCTAGCCTCTGT..................................................................................................................................... 30 3 1 1.00 1 1
..............................................................................................................TCTCTGTGGGGAGGGGGGACTACCGA......................................................................................................... 26 1 1 1.00 1 1
..............................................................CTGGTTAATTAAATTCTCAGACTGGTGC....................................................................................................................................................... 28 1 1 1.00 1 1
.......................................................................................TGCTGTGTTCCTAGCCTCTGGCCTC................................................................................................................................. 25 0 1 1.00 1 1
...............................................................................................................................................................................................................GACCTGGGTACCTAGGCTAGAAAGAAGGGC.... 30 1 1 1.00 1 1
............................................................TTCTGGTTAATTAAATCCTCAGACTGGTGCT...................................................................................................................................................... 31 0 1 1.00 1 1
..........................................................................................TGTGTTCCTAGCCTCTGGCCTCT................................................................................................................................ 23 0 1 1.00 1 1
...............................................................................CAGACTGGTGCTGTGTTCCTAGCCTCTGGCCG.................................................................................................................................. 32 1 1 1.00 1 1
...................................................................TAATTAAATCCTCAGACTGGTGCTGTGTT................................................................................................................................................. 29 0 1 1.00 1 1
...................................................................TAATTAGATACTCAGACTGGTGCTGT.................................................................................................................................................... 26 2 1 1.00 1 1
.....................................................................................................................................................................................................CAGAGGAAGGGACCTGGGTACCTAGGCT................ 28 0 1 1.00 1 1
..................................................................................................TAGCCTCTGGCCTCTCTGTGGGGAGGGGG.................................................................................................................. 29 0 1 1.00 1 1
.......................................................................................TGCTGTGTTCCTAGCCTCTGGCCTCTCTGTGG.......................................................................................................................... 32 0 1 1.00 1 1
.............................................................TCTGGTTAATTAAATCCTCAGACTGGTA........................................................................................................................................................ 28 1 1 1.00 1 1
..................................................................................ACTGGTGCTGTGTTCCTAGGCTCTGGCCT.................................................................................................................................. 29 1 1 1.00 1 1
............................................................................CCTCAGACTGGTGCTGTGTTCCTAGCCTC........................................................................................................................................ 29 0 1 1.00 1 1
..................................................................TTAATTAAATCCTCAGACTGGTGCT...................................................................................................................................................... 25 0 1 1.00 1 1
.......................................................................................................TCTGGCCTCTCTGTGGGGAGGGGGGACT.............................................................................................................. 28 0 1 1.00 1 1
..............................................................CTGGTTAATTAAATCCTCAGACTGGTGCTGT.................................................................................................................................................... 31 0 1 1.00 1 1
..........................................................................ATCCTCAGACTGGTGCTGTGTTCCT.............................................................................................................................................. 25 0 1 1.00 1 1

Anti-sense strand reads

TGTATCGGGGGGTCTGGAAAACATGTAAAAATGTCCCCACGGGGAGGGTTATTAGGGGGAAAGACCAATTAATTTAGGAGTCTGACCACGACACAAGGATCGGAGACCGGAGAGACACCCCTCCCCCCTGATGGCCCCCTTCCATCCTTGGGTCCCGAATAGGGACCCTTACACCCCAGGTCGTCCTCCGTCTGGTCGTCTCCTTCCCTGGACCCATGGATCCGACCTTTCTTCCCGTTTA

*****************************************************************************************************************..........(((((((((.............((.((((..(((((((......)))).....)))..)))).)))))))))))******************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:39 AM