ID:

eca-mir-9130

 Coordinate:

chr13:19978978-19979096 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-69.1 -68.8 -68.8

Sense Strand Reads

TCTCTGGGCTCCTGCGTTCTTGCTGCGTTCCCGTGTGGTCTTGGGGGAGACCCCACCCTGCCTTCCTGGAGACTCCTGCTCTTCCTCTGACAGGTACCCAGATTGAGGCTGGGCTGGGTGGCCTGCAGGTGGCAGGGGATGGAGTGGAGAGAGTCTGCAGCTCAGGCTCAGGCGGGGAGAGTTTGAACCCCAGCTCCAGAAGCTGCTTCCTCTCCCCGA

***********************************......(((((....)))))((((((((.(((((((((((((((((((((((((.(((((((((((............)))))).))))).......))))))).)))))))...)))))).....)))))...)))))))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
................................................................................CTTCCTCTGACAGGTACCCAGA..................................................................................................................... 22 0 1 1.00 1 1
.................................................................CTGGAGACTCCTGCTCTTCCTCTGACAGCC............................................................................................................................ 30 2 1 1.00 1 1
...............................................................TCCTGGAGACTCCTGCTCTTCCTCT................................................................................................................................... 25 0 1 1.00 1 1
..................CTTGCTGCGTTCCCGTGTGGTCTTGGA.............................................................................................................................................................................. 27 1 1 1.00 1 1

Anti-sense strand reads

AGAGACCCGAGGACGCAAGAACGACGCAAGGGCACACCAGAACCCCCTCTGGGGTGGGACGGAAGGACCTCTGAGGACGAGAAGGAGACTGTCCATGGGTCTAACTCCGACCCGACCCACCGGACGTCCACCGTCCCCTACCTCACCTCTCTCAGACGTCGAGTCCGAGTCCGCCCCTCTCAAACTTGGGGTCGAGGTCTTCGACGAAGGAGAGGGGCT

***********************************......(((((....)))))((((((((.(((((((((((((((((((((((((.(((((((((((............)))))).))))).......))))))).)))))))...)))))).....)))))...)))))))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:39 AM