ID:

eca-mir-9119

 Coordinate:

chr12:25043170-25043302 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.5 -36.2 -36.2

Sense Strand Reads

CAGGAAGGGATGCCCAGGGATCCAGAGCTGACAGGGCAGTGTGAGCAAAGCCACATGTGGGAAGGGGCGAGTGACAGTGTCGCAGGGACCCAAGCAGTAGTCTGGACCTTGTCAGCTGCAAGGTCCGacctgctttgtgactttagcaagatgctcaccctctctgagcctgtgtcctcatctcccaaacaggtttgccacagttgccttgccaggttgccaagatgattcta

************************************************************************.((((..(((.((((....((((((..(((.(((((((((.....)))))))))))))))))).........((((...))))..))))...)))..))))..********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................TGCTTTGTGACTTTAGCAAGATGCTCACCC......................................................................... 30 0 1 2.00 2 2
.......................................................................................ACCCAAGCAGTAGTCTGGACCTTGTCAGC..................................................................................................................... 29 0 1 2.00 2 2
...........................................................................................................................................................CACCCTCTCTGAGCCTGTGTCCTCATC................................................... 27 0 1 2.00 2 2
......................................................................................................................................TTGTGACTTTAGCAAGATGCTCACCCTCTC..................................................................... 30 0 1 1.00 1 1
........................................................................................CCCAAGCAGTAGTCTGGACCTTGTCAGC..................................................................................................................... 28 0 1 1.00 1 1
......................................................................................................................................................................................TCCCAAACAGGTTTGCCACAGTTGCCT........................ 27 0 1 1.00 1 1
..................................................................................................................................TGCTTTGTGACTTTAGCAAGATGCTCACC.......................................................................... 29 0 1 1.00 1 1
...............................................................................................................................................TAGCAAGATGCTCACCCTCTCTGAGCC............................................................... 27 0 1 1.00 1 1
......................................................................................................................................................................................TCCCAAACAGGTTTGCCACAGTTGCCTTGCC.................... 31 0 1 1.00 1 1
............................................................................................................................CCGACCTGCTTTGTGACTTCAGCAAGA.................................................................................. 27 1 1 1.00 1 1
...........................................................................................................................................................................................................TTGCCTTGCCAGGTTGCCAAGATGATTCT. 29 0 1 1.00 1 1
.......................................................................................ACCCAAGCAGTAGTCTGGACCGTGTCAGC..................................................................................................................... 29 1 1 1.00 1 1
...................................................CACATGTGGGAAGGGGCGAGTGACAG............................................................................................................................................................ 26 0 1 1.00 1 1
.......................................................................................CCCCAAGCAGTAGTCTGGACCTTGTCAGCTG................................................................................................................... 31 1 1 1.00 1 1
.......................................................................................................................................TGTGACTTTAGCAAGATGCTCACCCTCTCT.................................................................... 30 0 1 1.00 1 1
......................................................................................................................................TTGTGACTTTAGCAAGATGCTCACCC......................................................................... 26 0 1 1.00 1 1

Anti-sense strand reads

GTCCTTCCCTACGGGTCCCTAGGTCTCGACTGTCCCGTCACACTCGTTTCGGTGTACACCCTTCCCCGCTCACTGTCACAGCGTCCCTGGGTTCGTCATCAGACCTGGAACAGTCGACGTTCCAGGCTGGtgGtttgtgTGtttTgGTTgTtgGtGTGGGtGtGtgTgGGtgtgtGGtGTtGtGGGTTTGTggtttgGGTGTgttgGGttgGGTggttgGGTTgTtgTttGtT

**********************************************************.((((..(((.((((....((((((..(((.(((((((((.....)))))))))))))))))).........((((...))))..))))...)))..))))..************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:37 AM