ID:

eca-mir-9109

 Coordinate:

chr11:5462806-5462950 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-62.5 -62.5 -62.2 -62.0

Sense Strand Reads

gGggGGggGgTGCAGCTCGCCCTTGGACCCTAATCCCGTTTGCGGGCCCCTCAACCTGGAGCAACAACGTTCTTGGCGCTTTTCCGGGTGTTGGGCTCTCCCCTACTCGGATCGTATCCTAGGAATGTCCTAACTGTGCCCGTGGGGAGAACTTCACCCTGAGCCCGGGATTCCGTTCCAAGAACTGCAAGTTGACAGCTCGGCTGCCTCGCTCCCGGATCTGCCTCCTCCTCTCACCGTCTCGT

***********************************........(((((..........((((..((((((((((((.((..((((((((...(((.(((((((....(((...((((..(((((...)))))...))))))).)))))))......)))...))))))))....)).)))))))).....))))...)))))))....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................TAACTGTGCCCGTGGGGAGAACTTCACCCT..................................................................................... 30 0 1 1.00 1 1
....................................................................................................................TCCTAGGAATGTCCTAACTGTGCCC........................................................................................................ 25 0 1 1.00 1 1
...CGGCCGCTGCAGCTCGCAT............................................................................................................................................................................................................................... 19 2 7 0.14 1 1

Anti-sense strand reads

gCggCCggCgACGTCGAGCGGGAACCTGGGATTAGGGCAAACGCCCGGGGAGTTGGACCTCGTTGTTGCAAGAACCGCGAAAAGGCCCACAACCCGAGAGGGGATGAGCCTAGCATAGGATCCTTACAGGATTGACACGGGCACCCCTCTTGAAGTGGGACTCGGGCCCTAAGGCAAGGTTCTTGACGTTCAACTGTCGAGCCGACGGAGCGAGGGCCTAGACGGAGGAGGAGAGTGGCAGAGCA

***********************************........(((((..........((((..((((((((((((.((..((((((((...(((.(((((((....(((...((((..(((((...)))))...))))))).)))))))......)))...))))))))....)).)))))))).....))))...)))))))....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:35 AM