ID:

eca-mir-9105

 Coordinate:

chr11:6266898-6267034 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-65.6 -65.6 -65.6

Sense Strand Reads

TGGTCGTTCGTTGGTGGAAGTTGTTTTTGTTTCTTGGCCACTGCGGCGTTTCACTGAGCGGTAGAAGCGGTGTGGTGGTCGTGGGAGCGGTCTGAGACTTCGGCATTGGGTAAGCGTTTTTGGGATTTATCCGTGACTTGAGGTCTCGCCAGGCGTTGATGCCGCGAGCCGTGGCCGTTGGGAGCCGAGTTGCCGGCTGGTACGGGCTGCTGGGGGTCGCTGGCGTCGGGCGTGGGA

***********************************((((((((((.(((((((((....))).)))))).)))))))))).(((..(((((..(((((((((((((.(((((((...........)))))))))).)).))))))))((..(((......)))))..)))))..))).....(((((......)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................................TCGTGGGAGCGGTCTGAGACT.......................................................................................................................................... 21 0 1 1.00 1 1
...............................................................................CGTGGGAGCGGTCTGAGACGTCG....................................................................................................................................... 23 1 1 1.00 1 1
........................................................................TGGTGGTCGTGGGAGCGGTCTGAGACTTCGGCATTGGGTG............................................................................................................................. 40 1 1 1.00 1 1
................................CTTGGCCACTGCGGCGTTTCACTGAGCA................................................................................................................................................................................. 28 1 1 1.00 1 1
.................................................................................TGGGAGCGGTCTGAGACTTCGGCATTGG................................................................................................................................ 28 0 1 1.00 1 1
.....................................................................................AGCGGTCTGAGCCTTCGGCAT................................................................................................................................... 21 1 1 1.00 1 1
..........................................................................GTGGTCGTGGGAGCGGTCTGAGACTTCGGCATT.................................................................................................................................. 33 0 1 1.00 1 1
.........................................TGCGGCGTTTCACTGAGCGGTAGAAGC......................................................................................................................................................................... 27 0 1 1.00 1 1
..................................................TCACTGAGCGGTAGAAGCGGTGTGGT................................................................................................................................................................. 26 0 1 1.00 1 1
..............................TTCTTGGCCACTGCGGCGTTTCACTG..................................................................................................................................................................................... 26 0 1 1.00 1 1
.....................TGTTTTTGTTTCTTGGCCACTGCGGCGT............................................................................................................................................................................................ 28 0 1 1.00 1 1
..........................................................................................TCTGAGACTTCGGCATT.................................................................................................................................. 17 0 1 1.00 1 1
..................................................TCACTGAGCGGTAGAAGCGGTGTGGTGGTT............................................................................................................................................................. 30 1 1 1.00 1 1
.........................TTTGTTTCTTGGCCACTGCGGCGTTTCACTG..................................................................................................................................................................................... 31 0 1 1.00 1 1
.................................................................................TGGGAGCGGTCTGAGACTTCGGCATT.................................................................................................................................. 26 0 1 1.00 1 1
..................................................TAACTGAGCGGTAGAAG.......................................................................................................................................................................... 17 1 2 0.50 1 1

Anti-sense strand reads

ACCAGCAAGCAACCACCTTCAACAAAAACAAAGAACCGGTGACGCCGCAAAGTGACTCGCCATCTTCGCCACACCACCAGCACCCTCGCCAGACTCTGAAGCCGTAACCCATTCGCAAAAACCCTAAATAGGCACTGAACTCCAGAGCGGTCCGCAACTACGGCGCTCGGCACCGGCAACCCTCGGCTCAACGGCCGACCATGCCCGACGACCCCCAGCGACCGCAGCCCGCACCCT

***********************************((((((((((.(((((((((....))).)))))).)))))))))).(((..(((((..(((((((((((((.(((((((...........)))))))))).)).))))))))((..(((......)))))..)))))..))).....(((((......)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:35 AM