ID:

eca-mir-9103

 Coordinate:

chr11:24036392-24036536 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.6 -37.6 -37.6 -37.6

Sense Strand Reads

AGGGGGCAAGTCACCACCTCCACTGCTCTCTTTCTCATTTCCAACATGACTGGGAAGTCCTTCTTGATGTCTAACTTCAGTACCTTTCACTAGCCTTTGGGGAACAGCTCTGACTTTGGGTGCTTTAGCACCCAAGTCTTATCTGTCTCAGGTTCCTGACTCAGTACTTTAGGCACTTTACAGATGCAGCTTCTTCTAGACTTTGAAGTCTCCCTGGGACCCACTGTCTCCCATAAAAGCAGCCC

**********************************************************************((..((..(((((...(((..(((((...(((.((((....(((.((((((((....)))))))))))....))))))))))))..)))....)))))..)).........................))********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................................TTCACTAGCCTTTGGGGAACAGCTCTGACT.................................................................................................................................. 30 0 1 45.00 45 45
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGA.......................... 29 0 1 18.00 18 18
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCC....................... 29 0 1 9.00 9 9
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGACC........................ 31 0 1 7.00 7 7
.................................................................................................TGGGGAACAGCTCTGACTTTGGGTGC.......................................................................................................................... 26 0 1 6.00 6 6
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGACT........................ 31 1 1 6.00 6 6
...............................................................................................................................................................................................TCTTCTAGACTTTGAAGTCTCCCTGGGACC........................ 30 0 1 5.00 5 5
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCACT.................... 32 0 1 5.00 5 5
.....................................................................................TTCACTAGCCTTTGGGGAACAGCTCTGAC................................................................................................................................... 29 0 1 4.00 4 4
........................................................................................................................................................TTCCTGACTCAGTACTTTAGGCACTTTACAGT............................................................. 32 1 1 4.00 4 4
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGAA......................... 30 1 1 4.00 4 4
......................................TTCCAACATGACTGGGAAGTCCTTCTTGAT................................................................................................................................................................................. 30 0 1 4.00 4 4
...............................................................................................................................................................................................TCTTCTAGACTTTGAAGTCTCCCTGGGAC......................... 29 0 1 3.00 3 3
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGAAT........................ 31 2 1 3.00 3 3
.....................................................................................TTCACTAGCCTTTGGGGAACAGCTCTGACA.................................................................................................................................. 30 1 1 3.00 3 3
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCAC..................... 30 0 1 3.00 3 3
............................................................TTCTTGATGTCTAACTTCAGTACCTTTCACT.......................................................................................................................................................... 31 0 1 3.00 3 3
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCACT.................... 31 0 1 3.00 3 3
..................................................................................................................................................................................TACAGATGCAGCTTCTTCTAGACTTTGAAGT.................................... 31 0 1 3.00 3 3
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCA...................... 27 0 1 2.00 2 2
.....................................................................................................GAACAGCTCTGACTTTGGGTGCTTTAGCACCCAATT............................................................................................................ 36 1 1 2.00 2 2
................................................ACTGGGAAGTCCTTCTTGATGTCTAACT......................................................................................................................................................................... 28 0 1 2.00 2 2
..................................................................................................................................................................................TACAGATGCAGCTTCTTCTAGACTTTGAAGTT................................... 32 1 1 2.00 2 2
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGATGT.......................................................... 31 1 1 2.00 2 2
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCACTGT.................. 31 0 1 2.00 2 2
......................................TTCCAACATGACTGGGAAGTCCTTCTTGA.................................................................................................................................................................................. 29 0 1 2.00 2 2
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGA............................................................. 28 0 1 2.00 2 2
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGT.......................... 29 1 1 2.00 2 2
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACC........................ 28 0 1 2.00 2 2
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCATA.................... 32 2 1 2.00 2 2
................................................................................................................................................................................................CTTCTAGACTTTGAAGTCTCCCTGGGACCC....................... 30 0 1 2.00 2 2
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGATGC.......................................................... 31 0 1 2.00 2 2
.........................................................................................................................................................................TAGGCACTTTACAGATGCAGCTTCTTC................................................. 27 0 1 2.00 2 2
.....................................................................................TTCACTAGCCTTTGGGGAAGAGCTCTGACT.................................................................................................................................. 30 1 1 2.00 2 2
....................................................................................................................................CAAGTCTTATCTGTCTCAGGTTC.......................................................................................... 23 0 1 2.00 2 2
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCAC..................... 31 0 1 2.00 2 2
.................................................................................................TGGGGAACAGCTCTGACTTTGGGTGCTT........................................................................................................................ 28 0 1 2.00 2 2
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGA.......................... 26 0 1 2.00 2 2
..................................................................................................................................CCCAAGTCTTATCTGTCTCAGGTTC.......................................................................................... 25 0 1 2.00 2 2
................................................................TGATGTCTAACTTCAGTACCTTTCACTAGCCT..................................................................................................................................................... 32 0 1 2.00 2 2
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCT.............................. 25 0 1 2.00 2 2
...............................................................................................................................................................................................TCTTCTAGACTTTGAAGTCTCCCTGGGA.......................... 28 0 1 2.00 2 2
.......................................................................................................................................................................................................ACTTTGAAGTCTCCCTGGGACCCACTGTCT................ 30 0 1 2.00 2 2
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCACGT................... 32 2 1 2.00 2 2
........................................................................................................................................TCTTATCTGTCTCAGGTTCATGACA.................................................................................... 25 2 1 1.00 1 1
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGAA............................................................ 29 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCATT.................... 31 1 1 1.00 1 1
...........................CTCTTTCTCATTTCCAACATGACTGGT............................................................................................................................................................................................... 27 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGA.......................... 25 0 1 1.00 1 1
..................................................................................................................................................................................TATAGATGCAGCTTCTTCTAGACTTTGAAGTA................................... 32 2 1 1.00 1 1
..........................................AACATGACTGGGAAGTCCTTCGTGATGTCT............................................................................................................................................................................. 30 1 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCATT.................... 32 1 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTTTGAGGTCTCCCT.............................. 25 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGAC......................... 26 0 1 1.00 1 1
......................................................................................TCACTAGCCTTTGGGGAACAGCTCTGACTAT................................................................................................................................ 31 1 1 1.00 1 1
...............................TTCTCATTTCCAACATGACTGGGAAGTC.......................................................................................................................................................................................... 28 0 1 1.00 1 1
.............................................................................................................................TAGCACCCAAGTCTTATCTGTCTC................................................................................................ 24 0 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCAATG................... 33 1 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTTTGAGGTCTCCCTGGGAT......................... 30 2 1 1.00 1 1
..........................................................................................TAGCCTTTGGTGAACAGCTCTGACTTTGGGT............................................................................................................................ 31 1 1 1.00 1 1
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCACTGGA................. 32 2 1 1.00 1 1
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCACTG................... 30 0 1 1.00 1 1
.......................................................................................................ACAGCTCTGACTTTGGGTGCTTTAGCACCCAAGT............................................................................................................ 34 0 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGAT......................... 30 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCACTG................... 32 0 1 1.00 1 1
......................................TTCCAACATGACTGGGAAGACCTTCTTGA.................................................................................................................................................................................. 29 1 1 1.00 1 1
.....................................................................................TTCACTAGCCTGTGGGGAACAGCTCTGACA.................................................................................................................................. 30 2 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGAGTTTGAAGTCTCCCTGGGA.......................... 29 1 1 1.00 1 1
...........................................................................................................................TTTAGCACCCAAGTCTTATCTGTCTC................................................................................................ 26 0 1 1.00 1 1
.....................................TTTCCAACATGACTGGGAAGTCCTTCTTGT.................................................................................................................................................................................. 30 1 1 1.00 1 1
....................................................................................TTTCACTAGCCTTTGGGGAACAGCTCTGACT.................................................................................................................................. 31 0 1 1.00 1 1
........................................................................................................................................................................................TGCAGCTTCTTCTAGACTTTGGAGTCTCCCT.............................. 31 1 1 1.00 1 1
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGATGCT......................................................... 32 1 1 1.00 1 1
......................................TTCCAACATGACTGGGAAGTCCTTCTTGATG................................................................................................................................................................................ 31 0 1 1.00 1 1
.......................TGCTCTCTTTCTCATTTCCAACATGACTGGATT............................................................................................................................................................................................. 33 3 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCACTT................... 33 1 1 1.00 1 1
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGAT............................................................ 29 0 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCT...................... 30 1 1 1.00 1 1
...............................................................................................................................................................................................TCTTCTAGACTTTGAAGTCTCCCTGGGACT........................ 30 1 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCACA.................... 32 1 1 1.00 1 1
....................................................................................................................................................CAGGTTCCTGACTCAGTACTTTAGGCACT.................................................................... 29 0 1 1.00 1 1
......................................TTCCAACATGACTGGGAAGGCCTTCTTGAA................................................................................................................................................................................. 30 2 1 1.00 1 1
................................................................TGATGTCTAACTTCAGTACCTTTCACT.......................................................................................................................................................... 27 0 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCAAT.................... 32 1 1 1.00 1 1
........................................................................................................................................................................................TGCAGCTTCTTCTAGACTTTGAAGTCT.................................. 27 0 1 1.00 1 1
..............................TTTCTCATTTCCAACATGACTGGGAAGTC.......................................................................................................................................................................................... 29 0 1 1.00 1 1
.......................................................................................................................................................................................ATGCAGCTTCTTCTAGACTTTGAAGTC................................... 27 0 1 1.00 1 1
..................................................................................................................................CCCAAGTCTTATCTGTCTCAGGTTCCTGACA.................................................................................... 31 1 1 1.00 1 1
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCAC..................... 28 0 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTATGAAGTCTCCCT.............................. 25 1 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCTTTT................... 33 3 1 1.00 1 1
........................................................................................................................................................................................TGCAGCTTCTTCTAGACTTTGAAGTC................................... 26 0 1 1.00 1 1
.......................................TCCAACATGACTGGGAAGTCCTTCTTGATG................................................................................................................................................................................ 30 0 1 1.00 1 1
.....................................TTTCCAACATGACTGGGAAGTCCTTCTTGA.................................................................................................................................................................................. 30 0 1 1.00 1 1
...............................................................................................................................................................................................TCTTCTAGACTTTGAAGTCTCCCTGG............................ 26 0 1 1.00 1 1
.....................................................................................TTCACTAGCCTTTGGGGAACATCTCTGACT.................................................................................................................................. 30 1 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCAAA.................... 32 2 1 1.00 1 1
.......................................................................................................................................................................................ATGCAGCTTCTTCTAGACTTTGAAGTA................................... 27 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCAA..................... 30 1 1 1.00 1 1
..................................................................................................................................................................................TACAGATGCAGCTTCTTCTGGACTTTGAAGTT................................... 32 2 1 1.00 1 1
.........................................CAACATGACTGGGAAGTCCTTCTTGATGTC.............................................................................................................................................................................. 30 0 1 1.00 1 1
...................................................................................................................................CCAAGTCTTATCTGTCTCAGGTTC.......................................................................................... 24 0 1 1.00 1 1
.......................TGCTCTCTTTCTCATTTCCAACATGACTGT................................................................................................................................................................................................ 30 1 1 1.00 1 1
.................................................................................................................................................TCTCAGGTTCCTGACTCAGTACTTTAGGCACT.................................................................... 32 0 1 1.00 1 1
........................................CCAACATGACTGGGAAGTCCTTCTTGATGTCT............................................................................................................................................................................. 32 0 1 1.00 1 1
........................................................................................................................................TCTTATCTGTCTCAGGTTCCTGACT.................................................................................... 25 0 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCCA...................... 30 0 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGAC......................... 30 0 1 1.00 1 1
.......................................TCCAACATGACTGGGAAGTCCTTCTTGATGTT.............................................................................................................................................................................. 32 1 1 1.00 1 1
..................................................................................................................................................................................................TCTAGACTTTGAAGTCTCCCTGGGACCCAT..................... 30 1 1 1.00 1 1
............................................................................................................................................................TGACTCAGTACTTTAGGCACTTTACAGATGCTT........................................................ 33 2 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACATTGAAGTCTCCCTGGGA.......................... 29 1 1 1.00 1 1
.......................................................................................................ACAGCTCTGACGTTGGGTGCTTTAGCACCCAAGT............................................................................................................ 34 1 1 1.00 1 1
..........................................................................................TAGCCTTTGGGGAACAGCTCTGACTTTGGGT............................................................................................................................ 31 0 1 1.00 1 1
.............................................................................................................................TAGCACCCAAGTCTTATCTGTCTCAGG............................................................................................. 27 0 1 1.00 1 1
.....................................TTTCCAACATGACTGGGAAGTCCTTCTTGAA................................................................................................................................................................................. 31 1 1 1.00 1 1
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGACCCAAAT................... 30 3 1 1.00 1 1
..........................................................................................TAGCCTTTGGGGAACAGCTCTGACT.................................................................................................................................. 25 0 1 1.00 1 1
.........................................................................................................................................................TCCTGACTCAGTACTTTAGGCACTTTACAGT............................................................. 31 1 1 1.00 1 1
.................................................................................................................................................................................TTACAGATGCAGCTTCTTCTAGACTTTGAATAT................................... 33 3 1 1.00 1 1
.................................................................................................................................................................................................TTCTAGACTTTGAAGTCTCCCTGGGACCTA...................... 30 1 1 1.00 1 1
..............................................................................................................................................................................................TTCTTCTAGACTTTGAAGTCTCCCTGGGATT........................ 31 2 1 1.00 1 1
....................................................................................................................................................................................................TAGACTTTGAAGTCTCCCTGGGAC......................... 24 0 1 1.00 1 1
............................TCTTTCTCATTTCCAACATGACTGGGAAGTC.......................................................................................................................................................................................... 31 0 1 1.00 1 1

Anti-sense strand reads

TCCCCCGTTCAGTGGTGGAGGTGACGAGAGAAAGAGTAAAGGTTGTACTGACCCTTCAGGAAGAACTACAGATTGAAGTCATGGAAAGTGATCGGAAACCCCTTGTCGAGACTGAAACCCACGAAATCGTGGGTTCAGAATAGACAGAGTCCAAGGACTGAGTCATGAAATCCGTGAAATGTCTACGTCGAAGAAGATCTGAAACTTCAGAGGGACCCTGGGTGACAGAGGGTATTTTCGTCGGG

**********************************************((..((..(((((...(((..(((((...(((.((((....(((.((((((((....)))))))))))....))))))))))))..)))....)))))..)).........................))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:35 AM