ID:

eca-mir-9098

 Coordinate:

chr11:979994-980128 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.4

Sense Strand Reads

CCAAGGGAATCCACTCTGAAGTGCGAAGAAGCGGGGGACTTGCATGACCTGATCATCCAGCAGGGTGTGGTGTCATGCACTCTCATGACCTTGGTCGGGACGTAGTGAACCCCAGAGGTCAAGAAGTGGGGTGGCGCTGAGTCTTGCCACAAAGATCCTGAGGTGGCCAGGCTCCTGGGGGTTTTCCTGAGATGCTCTTCACTCCTCCCTTCACCCTTGTCTTGTAACAGAGGCA

**********************************************************************.((((((......))))))..(((.((((((.(((((.((((((............))))))..))))).))))))))).......(((.(((.(((...)))))).)))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................................TGACCTTGGTCGGGACGTAGTGAACCCCAGA....................................................................................................................... 31 0 1 2.00 2 2
.....................................................................................TGACCTTGGTCGGGACGTAGTGA............................................................................................................................... 23 0 1 1.00 1 1
...........................................................................................................................................................................................TGAGATGCTCTTCACTCCTCCCTTCACCCT.................. 30 0 1 1.00 1 1
........................................................................................CCTTGGTCGGGACGTAGTGGACCC........................................................................................................................... 24 1 1 1.00 1 1
...........................................................................................TGGTCGGGACGTAGTGAACCCCAGAGGTCAT................................................................................................................. 31 1 1 1.00 1 1
.........................................................................................................................................TGAGTCTTGCCACAAAGATCCTGAGGTG...................................................................... 28 0 1 1.00 1 1
.........TCCACTCTGAAGTGCGAAGAAGCGGG........................................................................................................................................................................................................ 26 0 1 1.00 1 1
..AAGGGAATCCACTCTGAAGTGCGAA................................................................................................................................................................................................................ 25 0 1 1.00 1 1

Anti-sense strand reads

GGTTCCCTTAGGTGAGACTTCACGCTTCTTCGCCCCCTGAACGTACTGGACTAGTAGGTCGTCCCACACCACAGTACGTGAGAGTACTGGAACCAGCCCTGCATCACTTGGGGTCTCCAGTTCTTCACCCCACCGCGACTCAGAACGGTGTTTCTAGGACTCCACCGGTCCGAGGACCCCCAAAAGGACTCTACGAGAAGTGAGGAGGGAAGTGGGAACAGAACATTGTCTCCGT

*******************************************************.((((((......))))))..(((.((((((.(((((.((((((............))))))..))))).))))))))).......(((.(((.(((...)))))).)))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................................................................................................................................................................AGGGAAGTGGGAACA............... 15 0 20 0.05 1 1

Generated: 09/01/2015 at 11:34 AM