ID:

eca-mir-9095

 Coordinate:

chr11:43019767-43019911 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-59.0 -58.9 -58.9

Sense Strand Reads

GACACAGGGGCAGAAGAGATTTAGATCAGAGCGTGAGCTGGTCTCTAGGTGGATGGACATCTCTAACCCCAGGGGTCTTTTGATAGGGTGGCTGCATATCAGTTGGAACGTTCTGCCTGGCGACAGTGCATGAAGGACAAGTTGGTTTCTGGCCATCCCTCTCTCCCAACTGTGGGTTTTAAGACTGTCCAGATCTGGTCCCTGCAACCTAACCAGTGCACAGCCTCTCCAGGACCTTTCAGCAC

***********************************.((.((...((((((...(((((((((..(((((((((((......((..(((((((((...((((((((.....(((((((((....))).))).)))...))).)))))...))))))))).))...)))..))).)))))...))).)))))).))))))..)).)).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................TGAAGGACAAGTTGGTTTCTGGCCATC........................................................................................ 27 0 1 2.00 2 2
..........................................................................................................................................................................TGTGGGTTTTAAGACTGTCCAGATCTGGTCT............................................ 31 1 1 2.00 2 2
..........................................................................................................................................................................TGTGGGTTTTAAGACTGTCCAGATCTGGTCCCTGCAACC.................................... 39 0 1 1.00 1 1
................................................................................................TATCAGTTGGAACGTTCTGCCTGGCGACT........................................................................................................................ 29 1 1 1.00 1 1
................................................................................................TATCAGTTGGAACGTTCTGCCTGGCGT.......................................................................................................................... 27 1 1 1.00 1 1
..............................................................................................................................TGCATGAAGGACAAGTTGGTTTCTGGCCATC........................................................................................ 31 0 1 1.00 1 1
...................................................................................................................................................................................TAAGACTGTCCAGATCTGGTCCCTGCAACC.................................... 30 0 1 1.00 1 1
...................................................................................................................................................................................TAAGACTGTCCAGATCTGGTCCCTGCAACCTAACC............................... 35 0 1 1.00 1 1
..............................................................................................................................TGCATGAAGGACAAGTTGGTTTCTGGCCATT........................................................................................ 31 1 1 1.00 1 1

Anti-sense strand reads

CTGTGTCCCCGTCTTCTCTAAATCTAGTCTCGCACTCGACCAGAGATCCACCTACCTGTAGAGATTGGGGTCCCCAGAAAACTATCCCACCGACGTATAGTCAACCTTGCAAGACGGACCGCTGTCACGTACTTCCTGTTCAACCAAAGACCGGTAGGGAGAGAGGGTTGACACCCAAAATTCTGACAGGTCTAGACCAGGGACGTTGGATTGGTCACGTGTCGGAGAGGTCCTGGAAAGTCGTG

***********************************.((.((...((((((...(((((((((..(((((((((((......((..(((((((((...((((((((.....(((((((((....))).))).)))...))).)))))...))))))))).))...)))..))).)))))...))).)))))).))))))..)).)).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:36 AM