ID:

eca-mir-9094

 Coordinate:

chr10:15397801-15397945 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-57.3 -57.3 -57.3 -57.3

Sense Strand Reads

AAGGGAGATTATCCTGGCCCTTGAGGACCCAGTATGAGATGCAAAAGGGACGTGGAAAAAGAGCAGGTGACACGGCAGGAGCAAAGACCTGGAGGCAGGGTGGGCGGGTTGAGGGTCTGTGGGCTTGGCCTCACCCGTGTCCTTTCTCTGCCTAGGACCTATACTGCCCCTGTACCCCACCCAAGCCATGGGCCCCCCCTTTCCTCTGCTGAACCTGCCTACACCCCTGTACCCCATGGTGTGCC

***********************************.((........((..(((((..........((((.....(((((.(((.((.(((..((((((((.(((((((.(((.((((.........))))))))))))..))...)))))))))))..))....))).)))))....))))....)))))..))..............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................................................TCACCCGTGTCCTTTCTCTGCCT............................................................................................ 23 0 1 14.00 14 14
..................................................................................................................................TCACCCGTGTCCTTTCTCTGCCTAGT......................................................................................... 26 1 1 5.00 5 5
..................................................................................................................................TCACCCGTGTCCTTTCTCTGCCTT........................................................................................... 24 1 1 2.00 2 2
..................................................................................................................................TCACCCGTGTCCTTTCTCTGCC............................................................................................. 22 0 1 2.00 2 2
..................................................................................................................................TCACCCGTGTGCTTTCTCTGCCT............................................................................................ 23 1 1 1.00 1 1
..................................................................................................................................TCACCCGTGTCCTTTCTCTGA.............................................................................................. 21 1 1 1.00 1 1
..................................................................................................................................TCACCCGTGACTTTTCTCTGCC............................................................................................. 22 2 1 1.00 1 1
..................................................................................................................................TCACCCGTGTCTTTTCTCTGCC............................................................................................. 22 1 1 1.00 1 1
..................................................................................................................................TCACCCGTGTCCTTGCGCTGCAT............................................................................................ 23 3 3 0.33 1 1

Anti-sense strand reads

TTCCCTCTAATAGGACCGGGAACTCCTGGGTCATACTCTACGTTTTCCCTGCACCTTTTTCTCGTCCACTGTGCCGTCCTCGTTTCTGGACCTCCGTCCCACCCGCCCAACTCCCAGACACCCGAACCGGAGTGGGCACAGGAAAGAGACGGATCCTGGATATGACGGGGACATGGGGTGGGTTCGGTACCCGGGGGGGAAAGGAGACGACTTGGACGGATGTGGGGACATGGGGTACCACACGG

***********************************.((........((..(((((..........((((.....(((((.(((.((.(((..((((((((.(((((((.(((.((((.........))))))))))))..))...)))))))))))..))....))).)))))....))))....)))))..))..............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:33 AM