ID:

eca-mir-9092

 Coordinate:

chr10:14584039-14584183 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.9 -49.9 -49.5

Sense Strand Reads

GCCTTTGCTCACAGAGTGCCCTCCTCTATTTCTGCTACTTTGACGCCATCTCTGGTTTGGTCCTGCGTGACGTCTCTGCCCTCACGCCAATGGCGATCGTGCCAGAGGTGGTATCTGAGAAAGCAAGACCCACTTTTGTTTGCATGGCTCTGTCCATTGGGGAGTGCTGATTGTGTTTATGTAGTTATAGGCCAGCACTCTTGGGTGTCACGTCTACTTTTTGGGGTGGTTGCCTTTTAAATCGT

***************************************************************************..((((.....(((((((.(((((((((((((((((..(((.........))).)))))))))...)))))).))...)))))))(((((((((.....(((((((....)))))))))))))))).))))..************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TGGCGATCGTGCCAGAGGTGGTATCTGAGA............................................................................................................................. 30 0 1 2.00 2 2
................................TGCTACTTTGACGCCATCTCTGGTTTGGTC....................................................................................................................................................................................... 30 0 1 2.00 2 2
............................................................................TGCCCTCACGCCAATGGCGATCGTG................................................................................................................................................ 25 0 1 1.00 1 1
....................................................................................................................................................................TGCTGATTGTGTTTATGTAGTTATAGGCC.................................................... 29 0 1 1.00 1 1
...............................................................................................................................ACCCACTTTTGTTTGCATGGCTCTGTC........................................................................................... 27 0 1 1.00 1 1
............................................................TCCTGCGTGACGTCTCTGCCCTCACT............................................................................................................................................................... 26 1 1 1.00 1 1
...............................................................TGCGTGACGTCTCTGCCCTCACG............................................................................................................................................................... 23 0 1 1.00 1 1
.......................................................TTTGGTCCTGCGTGACGTCTCTGCCC.................................................................................................................................................................... 26 0 1 1.00 1 1
..................................................TCTGGTTTGGTCCTGCGTGACGTCTCTGCCT.................................................................................................................................................................... 31 1 1 1.00 1 1
......................................................................................................................................TTTGTTTGCATGGCTCTGTCCATTGGGGAG................................................................................. 30 0 1 1.00 1 1
..........................TATTTCTGCTACTTTGACGCCATCTC................................................................................................................................................................................................. 26 0 1 1.00 1 1
...................................................................TGACGTCTCTGCCCTCACGCCAATGGCGAACT.................................................................................................................................................. 32 2 1 1.00 1 1
.....................TCCTCTATTTCTTCTACTTTGACGCC...................................................................................................................................................................................................... 26 1 1 1.00 1 1

Anti-sense strand reads

CGGAAACGAGTGTCTCACGGGAGGAGATAAAGACGATGAAACTGCGGTAGAGACCAAACCAGGACGCACTGCAGAGACGGGAGTGCGGTTACCGCTAGCACGGTCTCCACCATAGACTCTTTCGTTCTGGGTGAAAACAAACGTACCGAGACAGGTAACCCCTCACGACTAACACAAATACATCAATATCCGGTCGTGAGAACCCACAGTGCAGATGAAAAACCCCACCAACGGAAAATTTAGCA

*************************************..((((.....(((((((.(((((((((((((((((..(((.........))).)))))))))...)))))).))...)))))))(((((((((.....(((((((....)))))))))))))))).))))..*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:33 AM