ID:

eca-mir-9091

 Coordinate:

chr10:8611271-8611401 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-54.9 -54.9 -54.7

Sense Strand Reads

GTtttgtGTTttgtTGGCAGTTATTAAGGATGAAATCAATCAGGAAGTTGAATTGCATGCCTGAGAGCCAGCTGCTCATGGGAGACAGAACTGTAACTTCAGCGCCTGTGTCCTGCCTCCCAGTATATGGACGGAGTCTGAAACAGTGCGCTCCCAGCCCCGCTCTCTGATGCTGGGATGGGAACTGCGGCTCCAGAGTTGGTCAGACTGTTCGGATATTTGAGGCTGTTA

***********************************....(((((..((......))...)))))(((((..((((((....))).))).(((((...(((((...((.((((((((......)))...))))).)).))))))))))(((.(((((.(((.((........)).))).)))))..))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
......................................ATCAGGAAGTTGAATTGCATGTCTGAGAGCCT................................................................................................................................................................. 32 2 1 2.00 2 2
..................................................................................................TCAGCGCCTGTGTCCTGCCTCCCAGTA.......................................................................................................... 27 0 1 1.00 1 1
...........................................................................................................................TATATGGACGGAGTCTGAAACAGCGC.................................................................................. 26 1 1 1.00 1 1
......................................CTCAGGAAGTTGAATTGCATGTCTGAGAGCCT................................................................................................................................................................. 32 3 1 1.00 1 1
........................................................................TGCTCATGGGAGACAGAACTGTAAC...................................................................................................................................... 25 0 1 1.00 1 1
............................GATGAAATCAATCAGGAAGATGAATTGC............................................................................................................................................................................... 28 1 1 1.00 1 1

Anti-sense strand reads

CAtttgtCAAttgtACCGTCAATAATTCCTACTTTAGTTAGTCCTTCAACTTAACGTACGGACTCTCGGTCGACGAGTACCCTCTGTCTTGACATTGAAGTCGCGGACACAGGACGGAGGGTCATATACCTGCCTCAGACTTTGTCACGCGAGGGTCGGGGCGAGAGACTACGACCCTACCCTTGACGCCGAGGTCTCAACCAGTCTGACAAGCCTATAAACTCCGACAAT

***********************************....(((((..((......))...)))))(((((..((((((....))).))).(((((...(((((...((.((((((((......)))...))))).)).))))))))))(((.(((((.(((.((........)).))).)))))..))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:33 AM