ID:

eca-mir-9081

 Coordinate:

chr4:44746996-44747136 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

tTGtTTGTtTGgGGTGggTGTGTTgTgTggtTTtGtgTGTttGggtGTGgGTTTgttTTgtGTGgGTtgTTTgtttTtTgTTGGGtGgTTTTtGtgttTtgTGtTGggTGGGgTggtTTTGgTtGtttTGTggtGTttTTGGggTTGGGTttGGgggtGGTtTgtGTtTTGTTTtGtttTTggggtGtgttTGGTttgTgtgtGgtGTGTTGtGGtGgTgTGCCCTGAGCGACAGGAGGGT

***********************************...........................................................................................................................................................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TTAGACAATACTGATGCCTGGGC................................................................................................................................ 23 0 1 4.00 4 4
..........................................................................................TTAGACAATACTGATGCCTGGGA................................................................................................................................ 23 1 1 3.00 3 3
..........................................................................................TTAGACAATACTGATGCCTGGG................................................................................................................................. 22 0 1 2.00 2 2
..........................................................................................TTAGACAATACTGATGCCTGG.................................................................................................................................. 21 0 1 1.00 1 1
..........................................................................................TTAGACAATACTGATGCCTGGA................................................................................................................................. 22 1 1 1.00 1 1
...........................................................................................TAGACAATACTGATGCCTGG.................................................................................................................................. 20 0 1 1.00 1 1
..........................................................................................TTAGACAATACTGATGCCTGGGCAT.............................................................................................................................. 25 2 1 1.00 1 1
..........................................................................................TTAGACAATACTGATGCCTGGGAT............................................................................................................................... 24 1 1 1.00 1 1
..........................................................................................TTAGACAATACTGATGCCTGGGT................................................................................................................................ 23 1 2 0.50 1 1

Anti-sense strand reads

tACtAACAtACgCCACggACACAAgAgAggtAAtCtgACAttCggtCACgCAAAgttAAgtCACgCAtgAAAgtttAtAgAACCCtCgAAAAtCtgttAtgACtACggACCCgAggtAAACgAtCtttACAggtCAttAACCggAACCCAttCCgggtCCAtAgtCAtAACAAAtCtttAAggggtCtgttACCAttgAgtgtCgtCACAACtCCtCgAgACGGGACTCGCTGTCCTCCCA

***********************************...........................................................................................................................................................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:01 PM