ID:

eca-mir-9080

Coordinate:

chr29:10893677-10893815 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-66.2 -65.6 -65.5

Sense Strand Reads

tcgtgggattgattccaggacccctgcggatatcaaaatccatggatgctcaagtcccttaGTCGTATCCGGTAGTCTGCATCCAAGATTCAACCTACCATGGATCATAAACATAGTACTGTACAtgatccgaggttggttgaatctgtggatgtggaacatgtggatacagagggctaactgTCTATCTTTTCAAGCTATGTTTCTCCTTAGAATTCTGATTACCAAGTCTTTCTTCA

***********************************......(((((((....((.(((((....(((((((....((((((((((((((((((((.(((.((((((((..(((......)))..)))))))).))).)))))))))).)))))))))).....))))))).)))))))...)))))))................***********************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................ATCCGAGGTTGGTTGAATCTGT.......................................................................................... 22 0 1 9.00 9 9
...............................................................................................................................ATCCGAGGTTGGTTGAATCTG........................................................................................... 21 0 4 5.00 20 20
...............................................................................................................................CTCCGAGGTTGGTTGAATCTGT.......................................................................................... 22 1 1 1.00 1 1
...............................................................................................................................CTCCGAGGTTGGTTGAATCTG........................................................................................... 21 1 5 0.20 1 1

Anti-sense strand reads

tGgtgggTttgTttGGTggTGGGGtgGggTtTtGTTTTtGGTtggTtgGtGTTgtGGGttTCAGCATAGGCCATCAGACGTAGGTTCTAAGTTGGATGGTACCTAGTATTTGTATCATGACATGTtgTtGGgTggttggttgTTtGtgtggTtgtggTTGTtgtggTtTGTgTgggGtTTGtgAGATAGAAAAGTTCGATACAAAGAGGAATCTTAAGACTAATGGTTCAGAAAGAAGT

***********************************......(((((((....((.(((((....(((((((....((((((((((((((((((((.(((.((((((((..(((......)))..)))))))).))).)))))))))).)))))))))).....))))))).)))))))...)))))))................***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:59 AM