ID:

eca-mir-9075

 Coordinate:

chr3:17148088-17148232 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-61.2 -61.2 -61.2 -61.0

Sense Strand Reads

AGCAAGCTGCCAAGGTCTCAGGAGAGCTCCTGAGTGGGGACACTGAGCTTCTAGCCGCAGCCTGGAGCACCTGAGGTAGCTTCCCTCTTGGCTGCTCTCCCCTCCCTGCTCACTCCGAGGTGGTGGGCAATTAGGACCAGGATGAACATGGAGGAGGGAGTGAGAGAACCCGCCTTGCCCTCGGGAAGTGCCCAAGGCAGCCAGACAGGTGGCATGTGCTATACTTTTAGAGGGGGATGGACAGA

***********************************....((........(((.((....((((((.((((((((((((((....(((((....((((((.(((((.((.(((.(((..(((..............))).)))))).)).))))).))))))))))).....))..)))).)))))...)))))).))).)).)))...))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.......TGCCAAGGTCTCAGGAGAGCTCCTGATTT................................................................................................................................................................................................................. 29 2 1 3.00 3 3
....................................GGGACACTGAGCTTCTAGCCGCAGCCTGGAGCA................................................................................................................................................................................ 33 0 1 2.00 2 2
.......TGCCAAGGTCTCAGGAGAGCTCCTGAAT.................................................................................................................................................................................................................. 28 1 1 1.00 1 1
...........................................................................................................................TGGGCAATTAGGACCAGGATGAACA................................................................................................. 25 0 1 1.00 1 1
..................................................................................................................................TTAGGACCAGGATGAACATGGAGGAGT........................................................................................ 27 1 1 1.00 1 1
...................................................................................................................................TAGGACCAGGATGAACATGGAGTGT......................................................................................... 25 3 1 1.00 1 1
.......TGCCAAGGTCTCAGGAGAGCTCCTGAAAT................................................................................................................................................................................................................. 29 3 1 1.00 1 1
...................................................................................................................................TAGGACCAGGATGAACATGGAGGAAT........................................................................................ 26 2 1 1.00 1 1
..........................................................................................................................................................AGGGAGCGAGAGAACCCGCCTTGCCC................................................................. 26 1 1 1.00 1 1
..................................................................................................................................TTAGGACCAGGATGAACATGGAGGAGGTT...................................................................................... 29 2 1 1.00 1 1
........................................................................................................................................................................................................................TGCTATACTTTTAGAGGGGGAGGGAC... 26 1 1 1.00 1 1
..................................................................................................................................TTAGGACCAGGATGAACATGGAGGAT......................................................................................... 26 1 1 1.00 1 1

Anti-sense strand reads

TCGTTCGACGGTTCCAGAGTCCTCTCGAGGACTCACCCCTGTGACTCGAAGATCGGCGTCGGACCTCGTGGACTCCATCGAAGGGAGAACCGACGAGAGGGGAGGGACGAGTGAGGCTCCACCACCCGTTAATCCTGGTCCTACTTGTACCTCCTCCCTCACTCTCTTGGGCGGAACGGGAGCCCTTCACGGGTTCCGTCGGTCTGTCCACCGTACACGATATGAAAATCTCCCCCTACCTGTCT

***********************************....((........(((.((....((((((.((((((((((((((....(((((....((((((.(((((.((.(((.(((..(((..............))).)))))).)).))))).))))))))))).....))..)))).)))))...)))))).))).)).)))...))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:59 AM