ID:

eca-mir-9068

 Coordinate:

chr3:32455695-32455839 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-71.5 -71.5 -71.4 -71.4

Sense Strand Reads

GttGtGTGTTgttGGgtGTGtttgtGgtGGTGgtttGGgggtGGGGgtGGTCTGAGGACCAGGGAGAATGCCTGGACCATGCCGTGACAGATCGTGATCACGGGCATCTGGCGCTGCGGGGTGTCCTCTGAGGGGGCCGCAGATGCAGGTTCAGGGTGGGGGTCGTGTGTCATGGGCAGGCGTGTGTGTCCTGGGCTATGTCTCAACTCGTCTGACTCCACGTGTCCCCTTTGCAGGTCTAGGTT

***********************************((.....(((.((((.((.(((((........(((((((..(((((.((((((..(((.(((..((..(((((((((.((.(((((....)))))..)).)))..))))))..))))).)))....))))))...))))).)))))))....))))).)))))).))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................ATCGTGATCACGGGCATCTGGCGCT.................................................................................................................................. 25 0 1 2.00 2 2
.........................................................................................................................................................................................................CTCAACTCGTCTGACTCCACGTGT.................... 24 0 1 1.00 1 1
..........................................................................................................................................................................................................TCAACTCGTCTGACTCCACGTGT.................... 23 0 1 1.00 1 1
..........................................................................................ATCGTGATCACGGGCATCT........................................................................................................................................ 19 0 1 1.00 1 1
..........................................................................................ATCGTGATCACGGGCATCTGGCGCTA................................................................................................................................. 26 1 1 1.00 1 1
....................................................................TGCCTGGACCATGCCGGGACAGATCGTGT.................................................................................................................................................... 29 2 1 1.00 1 1

Anti-sense strand reads

CttCtCACAAgttCCgtCACtttgtCgtCCACgtttCCgggtCCCCgtCCAGACTCCTGGTCCCTCTTACGGACCTGGTACGGCACTGTCTAGCACTAGTGCCCGTAGACCGCGACGCCCCACAGGAGACTCCCCCGGCGTCTACGTCCAAGTCCCACCCCCAGCACACAGTACCCGTCCGCACACACAGGACCCGATACAGAGTTGAGCAGACTGAGGTGCACAGGGGAAACGTCCAGATCCAA

***********************************((.....(((.((((.((.(((((........(((((((..(((((.((((((..(((.(((..((..(((((((((.((.(((((....)))))..)).)))..))))))..))))).)))....))))))...))))).)))))))....))))).)))))).))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................................................................................................................................................................................AGGACCCGATACAGAGTTGAGCAGACT.............................. 27 0 1 2.00 2 2
....................TATGTCGTCCACGTTTCCGGGTCTCCGT..................................................................................................................................................................................................... 28 2 19 0.11 2 2
....................TTTGTCGTCCACGTTTCCGGGTCTCCGT..................................................................................................................................................................................................... 28 1 11 0.09 1 1

Generated: 09/01/2015 at 12:00 PM