ID:

eca-mir-9067

 Coordinate:

chr2:34018527-34018671 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-72.5 -72.4 -72.0

Sense Strand Reads

GGGAGGAGCTGTGTCCCTTTTTGCGGGTGAGGGAACAGAGGCAGCGGTCAGGGAGGGCTGTTGCCCATGGCCACTGCACAAGGTCTCAGCTACACTCGGGCTGATCTTTCCAGGCCAGGCTGAGTGGAGGGACAGCGACGGAGAGAGCTCAGGCTGCACGTCGGTGGGCTGCTGGTCAGTCTTGTTCCACTGTAGTCCCAGCCCTCCCGTGCATTTCAACCATCTGGGTTGTGCCAAGACAGCAC

***********************************.....((((.(((((....((((....)))).))))).)))).....(((((.....(((((((.(((.(((....))).))).)))))))..)))))....((((.(((.(((..(((((((.((.((.((((((.....))))))....)))))))))))..))).)))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................................................................................................................................................................TGGTCAGTCTTGTTCCACTGTAGTCCCAGCC.......................................... 31 0 1 3.00 3 3
............................................................................................................................................................................TGGTCAGTCTTGTTCCACTGTAGTCCCAGCCT......................................... 32 1 1 3.00 3 3
...............................................................................................................................................................................TCAGTCTTGTTCCACTGTAGTCCCAGCCCTA....................................... 31 1 1 1.00 1 1
..........................................................................TGCACAAGGTCTCAGCTACACTCGGGC................................................................................................................................................ 27 0 1 1.00 1 1
..........................................................................TGCACAAGGTCTCAGCTACACTCGGGCTGTA............................................................................................................................................ 31 2 1 1.00 1 1
............................................................................................................................................................................TGGTCAGTCTTGTTCCACTGTAGTCCCAGT........................................... 30 1 1 1.00 1 1
..........................................................................................TACACTCGGGCTGATCTTTCCAGGCCAGG.............................................................................................................................. 29 0 1 1.00 1 1
..........................................................................TGCACAAGGTCTCAGCTACACTCGGGCTGATC........................................................................................................................................... 32 0 1 1.00 1 1
..........................................................................TGCACAAGGTCTCAGCTACACTCGGGCT............................................................................................................................................... 28 0 1 1.00 1 1
..........................................................................................TACACTCGGGCTGATCTTTCCAGC................................................................................................................................... 24 1 1 1.00 1 1
............................................................................CACAAGGTCTCAGCTACACTCGGGCTGA............................................................................................................................................. 28 0 1 1.00 1 1

Anti-sense strand reads

CCCTCCTCGACACAGGGAAAAACGCCCACTCCCTTGTCTCCGTCGCCAGTCCCTCCCGACAACGGGTACCGGTGACGTGTTCCAGAGTCGATGTGAGCCCGACTAGAAAGGTCCGGTCCGACTCACCTCCCTGTCGCTGCCTCTCTCGAGTCCGACGTGCAGCCACCCGACGACCAGTCAGAACAAGGTGACATCAGGGTCGGGAGGGCACGTAAAGTTGGTAGACCCAACACGGTTCTGTCGTG

***********************************.....((((.(((((....((((....)))).))))).)))).....(((((.....(((((((.(((.(((....))).))).)))))))..)))))....((((.(((.(((..(((((((.((.((.((((((.....))))))....)))))))))))..))).)))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:48 AM