ID:

eca-mir-9064

 Coordinate:

chr2:51290808-51290946 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TCATGGGCTCGCTGTCTGTCCAGGTTAGTGGGCCGTCTCATGCTTGGTGGGGCCTTTAAGCAGTAATGGCTTGGATGACTCAGGCCTACTTTGAAGGTCCATTGTCCACTGTTTGACTTAGGGGCTGTGGGCCTGGGCTTTCTTGTAGGACCTGCAGGCTTCCCAAAGCGCCTGTTACTGGCTGAAAGGTGTCCGCTACTCTGATATCGGCACTCTGGCATGGATGATCACCCTGAGCG

***********************************..(((....(((((((((((((.((((((((((((((((....(((((((((((...(((((((((..((((((.((((.......)))).)))))).)))))))))..))))).)))).)).....))))...))).)))))).))).)))))).)))))))...)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................................................................................................................................AAGGTGTCCGCTACTCTGATATCGGCA........................... 27 0 1 1.00 1 1
....................................................................................................................................................................................................TACTCTGATATCGGCACTCTGGCATG................. 26 0 1 1.00 1 1
.......................................................................................................................................................................................................TCTGATATCGGCACTCTGGCATGGATGATCT......... 31 1 1 1.00 1 1
..............................................................................................................................................................................................................TCGGCACTCTGGCATGGATGATCACCC...... 27 0 1 1.00 1 1
..........................................................................................TTGAAGGTCCATTGTCCACTGTAA............................................................................................................................. 24 2 1 1.00 1 1
...............................................................................................................................................................................................TCCGCTACTCTGATATCGGCACT......................... 23 0 1 1.00 1 1
...............................................................................................................................................TCCAGGACCTGCAGGCTTCCCAAAGCGCCTGT................................................................ 32 2 1 1.00 1 1
..............................................................................................................................................................................................................TCGGCACTCTGGAATGGATGATCACCCTGT... 30 2 1 1.00 1 1
....................................................................................................................................................................................................TACTCTGATATCGGCACTCTGGCAT.................. 25 0 1 1.00 1 1
...........................................................................................TGAAGGTCCATTGTCCACTGTAA............................................................................................................................. 23 2 2 0.50 1 1

Anti-sense strand reads

AGTACCCGAGCGACAGACAGGTCCAATCACCCGGCAGAGTACGAACCACCCCGGAAATTCGTCATTACCGAACCTACTGAGTCCGGATGAAACTTCCAGGTAACAGGTGACAAACTGAATCCCCGACACCCGGACCCGAAAGAACATCCTGGACGTCCGAAGGGTTTCGCGGACAATGACCGACTTTCCACAGGCGATGAGACTATAGCCGTGAGACCGTACCTACTAGTGGGACTCGC

***********************************..(((....(((((((((((((.((((((((((((((((....(((((((((((...(((((((((..((((((.((((.......)))).)))))).)))))))))..))))).)))).)).....))))...))).)))))).))).)))))).)))))))...)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............CAGACAGGTCCAATCACCCGGCAGAGT....................................................................................................................................................................................................... 27 0 1 1.00 1 1

Generated: 09/01/2015 at 11:49 AM