ID:

eca-mir-9059

 Coordinate:

chr2:23588281-23588385 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-53.9 -53.8 -53.8

Sense Strand Reads

ATCCTGTGAAACATCCCCTTACCTCCATTTTGATCCCATTCTTCCTTTAGACGTCCCTTACCCCCCCACATCTTAGCAGCAAACAGCAGCCTCTGCCATAGAGGTTGGTGCTACGTGCAGTGGGAGGTCAGGGGAGTCTGGGATGGCAGACACTTTTGTCGTCTTCCCCACAGCTCCTAGCCCCCAACACCGGTATGACCACTAG

***********************************.............((((.(((((.(((..(((((......(((.....((.(((((((((...))))))))).)).....))).))))).))).))))).))))((((.(((.((((....))))))).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................TTTGATCCCATTCTTCCTTTAGACGTC...................................................................................................................................................... 27 0 1 1.00 1 1
......................................................................TCTTAGCAGCAAACAGCAGCCTC................................................................................................................ 23 0 1 1.00 1 1
......................................................................TCTTAGCAGCAAACAGCAGCCTCTGT............................................................................................................. 26 1 1 1.00 1 1
...........................................................................................................................................................TTGTCGTCTTCCCCACAGCTCCTAGCCT...................... 28 1 1 1.00 1 1
.........................................................................................................................................................TTTTGTCGTCTTCCCCACAGCTCCTAGC........................ 28 0 1 1.00 1 1
.......................................................................................................................................................ACTTTTGTCGTCTTCCCCACAGCTCCTAGCCT...................... 32 1 1 1.00 1 1

Anti-sense strand reads

TAGGACACTTTGTAGGGGAATGGAGGTAAAACTAGGGTAAGAAGGAAATCTGCAGGGAATGGGGGGGTGTAGAATCGTCGTTTGTCGTCGGAGACGGTATCTCCAACCACGATGCACGTCACCCTCCAGTCCCCTCAGACCCTACCGTCTGTGAAAACAGCAGAAGGGGTGTCGAGGATCGGGGGTTGTGGCCATACTGGTGATC

***********************************.............((((.(((((.(((..(((((......(((.....((.(((((((((...))))))))).)).....))).))))).))).))))).))))((((.(((.((((....))))))).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:48 AM