ID:

eca-mir-9057

 Coordinate:

chr1:28265739-28265877 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

GGACAGCCCACCTCTTCTCCCTCAACACAACCATGGCACAGTTCCACCCCACCACCCTGGAGTACGCAGGCATCCCCAGTCTCGGGCCTGCAGGAGTAGCTTTGGCCTAGCCGGTGACCATCCTTGGCCCAGGCTGGCCCTACTTTGTGGCCAGGATCACAGGCAGGGAGAGCCTGACATTCCACCCCCCAGACTCCCTCCTATCCTCTCGCATCCCCTAAGAATTGCTCTCAAACAAA

***********************************.....((................(((((...(((((.(((((.(((((.((((.(((.((((((....((((.((((((...(((....))).)).)))))))))))))))))))))..)).....))).))).)))))))................))))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................CAGGAGTAGCTTTGGCCTAGCCATA............................................................................................................................ 25 3 1 1.00 1 1
............................................................................................................................................TACTTTGTGGCCAGGATCACACGCTT......................................................................... 26 3 1 1.00 1 1

Anti-sense strand reads

CCTGTCGGGTGGAGAAGAGGGAGTTGTGTTGGTACCGTGTCAAGGTGGGGTGGTGGGACCTCATGCGTCCGTAGGGGTCAGAGCCCGGACGTCCTCATCGAAACCGGATCGGCCACTGGTAGGAACCGGGTCCGACCGGGATGAAACACCGGTCCTAGTGTCCGTCCCTCTCGGACTGTAAGGTGGGGGGTCTGAGGGAGGATAGGAGAGCGTAGGGGATTCTTAACGAGAGTTTGTTT

***********************************.....((................(((((...(((((.(((((.(((((.((((.(((.((((((....((((.((((((...(((....))).)).)))))))))))))))))))))..)).....))).))).)))))))................))))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:30 AM