ID:

eca-mir-9055

 Coordinate:

chr1:92819756-92819846 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.7 -39.7 -39.4 -39.4

Sense Strand Reads

agaactctctcccacaggtcttcacacagaggaccgccccttgggacttgatgggcagtgtcctgagagagcaccaagggagctgcgtggggctatttatcacagcgtccctccgtgctgtcccatggcttggaaccaaaaccagctcagaaacagcacctcttcccagggccaaaataatgtggtttgaa

***********************************....((((((......(((.....(((.((.((.(((((..(((((((((.(((((....)))))..)))).)))))..))))).)).)).)))......))).......)))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.................................................................AGAGAGCACCAAGGGAGCTGCGAA...................................................................................................... 24 2 1 3.00 3 3
.................................................................AGAGAGCACCAAGGGAGCTGCGAAT..................................................................................................... 25 3 1 2.00 2 2
.................................................................AGAGAGCACCAAGGGAGCTGCGA....................................................................................................... 23 1 1 2.00 2 2
.................................................................AGAGAGCACCAAGGGAGCTGCGT....................................................................................................... 23 0 1 2.00 2 2
.................................................................AGAGAGCACCAAGGGAGCTGCGAAA..................................................................................................... 25 3 1 2.00 2 2
.................................................................AGAGAGCACCAAGGGAGCTGA......................................................................................................... 21 1 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCG........................................................................................................ 22 0 1 1.00 1 1
.................................................................CGAGAGCACCAAGGGAGCTGCG........................................................................................................ 22 1 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCT........................................................................................................ 22 1 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCGTATT.................................................................................................... 26 3 1 1.00 1 1
.................................................................CGAGAGCACCAAGGGAGCTGCGAA...................................................................................................... 24 3 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCGAGA..................................................................................................... 25 2 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGAAT....................................................................................................... 23 2 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCGAT...................................................................................................... 24 2 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGCGAAG..................................................................................................... 25 2 1 1.00 1 1
........................................................................................................................TCCCGCGGCTTGGAACCAAAACCA............................................... 24 2 1 1.00 1 1
.................................................................AGAGAGCACCAAGGGAGCTGAAA....................................................................................................... 23 3 16 0.13 2 2

Anti-sense strand reads

TgTTGtGtGtGGGTGTggtGttGTGTGTgTggTGGgGGGGttgggTGttgTtgggGTgtgtGGtgTgTgTgGTGGTTgggTgGtgGgtggggGtTtttTtGTGTgGgtGGGtGGgtgGtgtGGGTtggGttggTTGGTTTTGGTgGtGTgTTTGTgGTGGtGttGGGTgggGGTTTTtTTtgtggtttgTT

***********************************....((((((......(((.....(((.((.((.(((((..(((((((((.(((((....)))))..)))).)))))..))))).)).)).)))......))).......)))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:31 AM