ID:

eca-mir-9053

Coordinate:

chr1:36440087-36440229 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TTTTAAAAGTTAAAATACAAAACACGACATTCAAAAGTCGCTCTGTAAATATCAAGTTTTCCTTGGGTTTTCCACCTTAAGTGAGAGTTTTAATTGATGAGATGTAACTGGgtGTGgTggTgtttgTtgTtgtgtTgTGtTgtggTGGGgGTgTTGTGtttGGGTGGtTTTGtgggtGgtTTgTGGtGTGGGGgggttGtTTgTTGGtGTTgTtGGttGgTgggtGGTGtTGgTgtTTgTTTG

************************************************************************(((((..(((....((((((.....))))))...))))))))......................................................***************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.................................................................................................................................TACACATCTGATCACCTGGGCGTC.......................................................................................... 24 0 1 1.00 1 1
........................................................................................................................TCAAACTACTACACATCTGATCACCT................................................................................................. 26 0 1 1.00 1 1
.......................................................................................TTTTAATTGATGAGATGTAACTGGCAGT................................................................................................................................ 28 0 1 1.00 1 1
........................................................................................TTTAATTGATGAGATGTAACTGGCAGTGC.............................................................................................................................. 29 0 1 1.00 1 1

Anti-sense strand reads

AAAATTTTCAATTTTATGTTTTGTGCTGTAAGTTTTCAGCGAGACATTTATAGTTCAAAAGGAACCCAAAAGGTGGAATTCACTCTCAAAATTAACTACTCTACATTGACCgtCACgAggAgtttgAtgAtgtgtAgACtAgtggACCCgCAgAACACtttCCCACCtAAACtgggtCgtAAgACCtCACCCCgggttCtAAgAACCtCAAgAtCCttCgAgggtCCACtACgAgtAAgAAAC

***************************************************************************(((((..(((....((((((.....))))))...))))))))......................................................************************************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:29 AM