ID:

eca-mir-9048

 Coordinate:

chr1:40605640-40605768 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-15.82 -15.72 -15.72

Sense Strand Reads

CTAAATCCAGACAGGTAAAGAACTGAAGTGCTTAGAAACTACTGTAgtGTgGGgggTggGTtTgTGTGtGgTgTGgtTgTGgGGGtTTgttggttggGgGGtTgGTGTATGTACTGTGGTTACCtTgTGgtGTTGGgTGtGgggtgGGGTGgtGttTggtggttTtgtGtGGtggTAGTAACACtgTggtGgtTgTGTGGtgTTTGGTttgTtgTtGGGTTggTGGttg

***********************************.((((((((((((((....((((.((...............................................)).))))....((((((((((........)))))))))).................................))))))))))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................................................................................CATCTGCAGTTGGCTGAGCCCT.................................................................................... 22 1 1 3.00 3 3
...........................................................................................................................CATCTGCAGTTGGCTGAGCCC..................................................................................... 21 0 1 2.00 2 2
..........................................................................................................................CCATCTGCAGTTGGCTGAGCCCT.................................................................................... 23 1 1 1.00 1 1
...........................................................................................................................CATCTGCAGTTGGCTGAGCC...................................................................................... 20 0 1 1.00 1 1
..........................................................................................................................CCATCTGCGGTTGGCTGAGCCGT.................................................................................... 23 3 1 1.00 1 1

Anti-sense strand reads

GATTTAGGTCTGTCCATTTCTTGACTTCACGAATCTTTGATGACATgtCAgCCgggAggCAtAgACACtCgAgACgtAgACgCCCtAAgttggttggCgCCtAgCACATACATGACACCAATGGtAgACgtCAACCgACtCgggtgCCCACgtCttAggtggttAtgtCtCCtggATCATTGTGtgAggtCgtAgACACCtgAAACCAttgAtgAtCCCAAggACCttg

***********************************.((((((((((((((....((((.((...............................................)).))))....((((((((((........)))))))))).................................))))))))))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:30 AM