ID:

eca-mir-9047

 Coordinate:

chr1:162054092-162054214 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-60.2 -59.9 -59.8 -59.5

Sense Strand Reads

GCCCCGCCCTTCCTTAGCCTTAAGCTCCTCCCCTTCCCCTGAAATTGGGTCGCAATCCCGCCTTCTTTCCTAGCACTTCCTGTTCCCGGCTGACCCTGGCTAGGGGCCCAGGGCCGAAGAGTGACCGTGGCCGGAGTGACCCGGGGCGGCTGCGCGGACTGGGCTGGGCCGTGAAGCCGGACACTAGGCCGGAgggccgcgcgcagcctgcgccgggtcccgg

***********************************((........(((.((((...(((((((....(((..(((....(((.((((((...((.(((((((((((((...)))).........)).))))))).))...))))))))).)))..)))..)))).)))..))))..))).......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
................................................................................TGTTCCCGGCTGACCCTG............................................................................................................................. 18 0 1 2.00 2 2
................................................................................TGTTCCCGGCTGACCCTGGCTAGG....................................................................................................................... 24 0 1 1.00 1 1
............................................................................................................................................................................................CCGGAGGGCCGCGCGCAGCCTGCGCCGGG...... 29 0 1 1.00 1 1

Anti-sense strand reads

CGGGGCGGGAAGGAATCGGAATTCGAGGAGGGGAAGGGGACTTTAACCCAGCGTTAGGGCGGAAGAAAGGATCGTGAAGGACAAGGGCCGACTGGGACCGATCCCCGGGTCCCGGCTTCTCACTGGCACCGGCCTCACTGGGCCCCGCCGACGCGCCTGACCCGACCCGGCACTTCGGCCTGTGATCCGGCCTgggGGgGgGgGTgGGtgGgGGgggtGGGgg

***********************************((........(((.((((...(((((((....(((..(((....(((.((((((...((.(((((((((((((...)))).........)).))))))).))...))))))))).)))..)))..)))).)))..))))..))).......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:33 AM