ID:

eca-mir-9039

 Coordinate:

chr25:33546337-33546447 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.3 -29.1 -29.1

Sense Strand Reads

AATaataatacaaagtgacaacagttattgagaagtgccaagagctgtgaatgcaccacatttgttatcgctttacactctcacagcaacgctctgggcagactttactgtcctccgttctgtaggtgaggaagctgaggatgagcaaggaagggtgacctgcccaggcctcgtagctggtgagcggcagagctggtagtcacacgcaggc

*****************************************************..((...((((((.(((((((.(((.((.((((.((((....((((((......))))))..)))))))))))))..))))).)).))))))...)).************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................TGAGAAGTGCCAAGAGCTGTGAATGCACTT......................................................................................................................................................... 30 2 1 3.00 3 3
........................TTATTGAGAAGTGCCAAGAGCGGTGAATGT............................................................................................................................................................. 30 2 1 1.00 1 1
............................TGAGAAGTGCCAAGAGCTGTGAATGCACCAC........................................................................................................................................................ 31 0 1 1.00 1 1
.........................TATTGAGAAGTGCCAAGAGCTGTGAATGCAC........................................................................................................................................................... 31 0 1 1.00 1 1
........................TTATTGAGAAGTGCCAAGAGCTGTGAATGT............................................................................................................................................................. 30 1 1 1.00 1 1
..............................AGAAGTGCCAAGAGCTGTGAATGCACC.......................................................................................................................................................... 27 0 1 1.00 1 1
............................TGAGAAGTGCCAAGAGCTGTGAATGCAC........................................................................................................................................................... 28 0 1 1.00 1 1
............................TGAGAAGTGCCAAGAGCTGTGAATGCA............................................................................................................................................................ 27 0 1 1.00 1 1
............................TGAGAAGTGCCAAGAGCTGTGAATGCACCTT........................................................................................................................................................ 31 2 1 1.00 1 1
....................................................................CGCTTTACACTCTCACAGCAACGCTCTGGGC................................................................................................................ 31 0 1 1.00 1 1
...........................TTGAGAAGTGCCAAGAGCTGTGAATGT............................................................................................................................................................. 27 1 1 1.00 1 1
.................................................................................................................TCCGTTCTGTAGGTGAGGAAGCT........................................................................... 23 0 1 1.00 1 1

Anti-sense strand reads

TTATTtTTtTGTTTgtgTGTTGTgttTttgTgTTgtgGGTTgTgGtgtgTTtgGTGGTGTtttgttTtGgGtttTGTGtGtGTGTgGTTGgGtGtgggGTgTGtttTGtgtGGtGGgttGtgtTggtgTggTTgGtgTggTtgTgGTTggTTgggtgTGGtgGGGTggGGtGgtTgGtggtgTgGggGTgTgGtggtTgtGTGTGgGTggG

************************************************************..((...((((((.(((((((.(((.((.((((.((((....((((((......))))))..)))))))))))))..))))).)).))))))...)).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:56 AM