ID:

eca-mir-9032

 Coordinate:

chr25:2529347-2529441 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.4 -32.3 -32.3

Sense Strand Reads

ACCTCGACCTCTTGAGATAAGGCCGACGCCAGGGCTGGGACCAAAACTGAAATCTCTCTCGGTTGGTATTAATGCCGTTGAGGTTGAGGCTGCCCAGTGGCTCTCTGCAGATTCCGTTGATACTAAGTGGAGAGCTAGTGTGCGTAGTGCTCGTGCTGCTGCGTTTCTGAGTGACGTGCACGCTTTCAGAGAGGA

***************************************************..((((((((..(((((....))))).)))))..)))(((((.((.(((((((((((((..((....))..))..))))))))))).))...)))))..********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................................................TGCAGATTCCGTTGATACTAAGTGGAGAGC............................................................ 30 0 1 24.00 24 24
..................................................................TATTAATGCCGTTGAGGTTGAGGCTGCCC.................................................................................................... 29 0 1 7.00 7 7
..................................................................TATTAATGCCGTTGAGGTTGAGGCTGCCCT................................................................................................... 30 1 1 3.00 3 3
..................................................................TATTAATGCCGTTGAGGTTGAGGCTGCC..................................................................................................... 28 0 1 3.00 3 3
.........................................................................................CTGCCCAGTGGCTCTCTGCAGATTCCGTTAT........................................................................... 31 2 1 3.00 3 3
.....................................................................TAATGCCGTTGAGGTTGAGGCTGCCT.................................................................................................... 26 1 1 2.00 2 2
.........................................................................................................TGCAGATTCCGTTGATACTAAGTG.................................................................. 24 0 1 2.00 2 2
...................................TGGGACCAAAACTGAAATCTCTCTCGGTT................................................................................................................................... 29 0 1 2.00 2 2
...TCGACCTCTTGAGATAAGGCCGACGCCAGGGC................................................................................................................................................................ 32 0 1 2.00 2 2
.........................................................................................................TGCAGATTCCGTTGATACTAAGTGGAGAGT............................................................ 30 1 1 2.00 2 2
..............................................................TTGGTATTAATGCCGTTGAGGTTGAGGCT........................................................................................................ 29 0 1 1.00 1 1
....................................................................TTAATGCCGTTGAGGTTGAGGCTGCTT.................................................................................................... 27 2 1 1.00 1 1
..................................................................TATTAATGTCGTTGAGGTTGAGGCTGCC..................................................................................................... 28 1 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAAGTGG................................................................. 25 0 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAAG.................................................................... 22 0 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAAGTGGAGAG............................................................. 29 0 1 1.00 1 1
..................................................................TATTAATGCCGTTGAGGTTGAGGCT........................................................................................................ 25 0 1 1.00 1 1
...............................................................................................................................................................TGCGTTTCTGAGTGACGTGCACGCTTTCAGT..... 31 1 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAAGGGAAGAGC............................................................ 30 2 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAATTGGAGAGC............................................................ 30 1 1 1.00 1 1
.........................................................................................................TGCAGATTCCGTTGATACTAAGTGGT................................................................ 26 1 1 1.00 1 1
...................................TGGGACCAAAACTGAAATCTCTCTCGGTTG.................................................................................................................................. 30 0 1 1.00 1 1
...........................................................................................................................TAAGTGGAGAGCTAGTGTGCGTAGTGCTC........................................... 29 0 1 1.00 1 1

Anti-sense strand reads

TGGAGCTGGAGAACTCTATTCCGGCTGCGGTCCCGACCCTGGTTTTGACTTTAGAGAGAGCCAACCATAATTACGGCAACTCCAACTCCGACGGGTCACCGAGAGACGTCTAAGGCAACTATGATTCACCTCTCGATCACACGCATCACGAGCACGACGACGCAAAGACTCACTGCACGTGCGAAAGTCTCTCCT

*********************************************..((((((((..(((((....))))).)))))..)))(((((.((.(((((((((((((..((....))..))..))))))))))).))...)))))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:55 AM