ID:

eca-mir-9027

 Coordinate:

chr26:26164919-26165045 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-75.1 -75.0 -74.7

Sense Strand Reads

CGAGAGCCCGAATCCTCTGCTCCGAGTTGGTCCTCTGCTCAAGGCTCTTCTTCCTTAAGCACGTTACGCGGCCTCGGCCCGGTACCGCGTTCTCATTGGCTTCCTGTCCTGTCAGTTCCAGGAGCTGGCCAATGAGTTGTCGGTGCTGGCGCCCTTCTCGACGCCGTGGACGCCGCGGTTCCCCCGTGGGTGCGGAGCAGTTGGAAGGGAAGGGGAGGTGTGGCGGG

***********************************((((.((((........)))).))))((((.((((((.((((((((((((((((..((((((((((.....(((((.......)))))...)))))))))).)).))))))))).)))......)).))))))))))((((((.....))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................................TTCTCATTGGCTTCCTGTCCTGT................................................................................................................... 23 0 1 3.00 3 3
.........................................................................................TTCTCATTGGCTTCCTGTCCTGTC.................................................................................................................. 24 0 1 3.00 3 3
.........................................................................................................................GAGCTGGCCAATGAGTTGTCGTA................................................................................... 23 2 1 1.00 1 1
.........................................................................................TTCTCATTGGCTGCCTGTCCTGT................................................................................................................... 23 1 1 1.00 1 1
.........................................................................................................................GAGCTGGCCAATGAGTTGTCGAGA.................................................................................. 24 3 3 0.33 1 1

Anti-sense strand reads

GCTCTCGGGCTTAGGAGACGAGGCTCAACCAGGAGACGAGTTCCGAGAAGAAGGAATTCGTGCAATGCGCCGGAGCCGGGCCATGGCGCAAGAGTAACCGAAGGACAGGACAGTCAAGGTCCTCGACCGGTTACTCAACAGCCACGACCGCGGGAAGAGCTGCGGCACCTGCGGCGCCAAGGGGGCACCCACGCCTCGTCAACCTTCCCTTCCCCTCCACACCGCCC

***********************************((((.((((........)))).))))((((.((((((.((((((((((((((((..((((((((((.....(((((.......)))))...)))))))))).)).))))))))).)))......)).))))))))))((((((.....))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............AGACGAGGCTCAACCAGGAGACGAGT.......................................................................................................................................................................................... 26 0 1 1.00 1 1

Generated: 09/01/2015 at 11:57 AM