ID:

eca-mir-9025

 Coordinate:

chr26:39986726-39986870 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.1 -36.7 -36.7 -36.6

Sense Strand Reads

TTGGGAATTGTTCAAGGAAGCAAGAGATCCCGCTCCTAAGCTTCGCTGGTCAGTATGGCTAGATGCACCATAGTGGTAAGAGCCCTCCCCTGGCTTGGTAGGAGCAGTACTGGGATCAGCTGCTGATGTCTGCTGTGTGACTGTTGGGCTTTGGAGTGTTTGACACGGGGGAGGTGTCTGCCATCTTTGATGTTCTTCAGGGCCCCCACATCGTTTACTGGGTCATGTTTCTCCACTGTCCCACA

********************************************...............(((((((.((.........(((((((.......((..(((((...((((((((....))).)))))....)))))..)).......))))))))).))))))).********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................................................................................................................................TGTCTGCCATCTTTGATGTTCTTCAGGGC.......................................... 29 0 1 24.00 24 24
..................................................................................................................................................................................TGCCATCTTTGATGTTCTTCAGGGC.......................................... 25 0 1 9.00 9 9
.................................TCCTAAGCTTCGCTGGTCAGTATGGCTAG....................................................................................................................................................................................... 29 0 1 4.00 4 4
...........................................................TAGATGCACCATAGTGGTAAGAGCCCTCCCCT.......................................................................................................................................................... 32 0 1 3.00 3 3
....................................TAAGCTTCGCTGGTCAGTATGGCTAGA...................................................................................................................................................................................... 27 0 1 3.00 3 3
.......TTGTTCAAGGAAGCAAGAGATCCCGCTCCT................................................................................................................................................................................................................ 30 0 1 3.00 3 3
....................................TAAGCTTCGCTGGTCAGTATGGCTAG....................................................................................................................................................................................... 26 0 1 2.00 2 2
...........................................................................................................................TGATGTCTGCTGTGTGACTGTTGGGGTTTG............................................................................................ 30 1 1 2.00 2 2
........................................................................................................................TGCTGATGTCTGCTGTGTGACTGTTGGGGTT.............................................................................................. 31 1 1 2.00 2 2
TTGGGAATTGTTCAAGGAAGCAAGAGAT......................................................................................................................................................................................................................... 28 0 1 2.00 2 2
......................................................................TAGTGGTAAGAGCCCTCCCCTGGCTTGGTAG................................................................................................................................................ 31 0 1 2.00 2 2
...........................................................................................................................TGATGTCTGCTGTGTGACTGTTGGGGTTTA............................................................................................ 30 2 1 2.00 2 2
...........................................................................................................................TGATGTCTGCTGTGTGACTGTGGGGT................................................................................................ 26 2 1 1.00 1 1
.................................TCCTAAGCTTCGCTGGTCAGTATGGCTATT...................................................................................................................................................................................... 30 2 1 1.00 1 1
.................................TCCTAAGCTTCGCTGGTCAGTATGGCTAGATG.................................................................................................................................................................................... 32 0 1 1.00 1 1
.................................TCCTAAGCTTCGCTGGTCAGTATGGCTAGA...................................................................................................................................................................................... 30 0 1 1.00 1 1
....................................TAAGCTTCGCTGGTCAGTATGGCTAGATGCACC................................................................................................................................................................................ 33 0 1 1.00 1 1
.......................................................................................................................................................................................TCTTTGATGTTCTTCAGGGCCC........................................ 22 0 1 1.00 1 1
...........................................................TAGATGCACCATAGTGGTAAGAGCCCT............................................................................................................................................................... 27 0 1 1.00 1 1
..................................................................................................................................................................................TGCCATCTTTGATGTTCTTCACGGC.......................................... 25 1 1 1.00 1 1
...........................................................TAGATGCACCATAGTGGTAAGAGCCCTCCCC........................................................................................................................................................... 31 0 1 1.00 1 1
.TGGGAATTGTTCAAGGAAGCAAGAGATCC....................................................................................................................................................................................................................... 29 0 1 1.00 1 1
...........................................................................................................................TGATGTCTGCTGTGTGACTGTTGGGGT............................................................................................... 27 1 1 1.00 1 1
..................................................................................................................................................................................................................TCGTTTACTGGGTCATGTTTCTCCACTGTCT.... 31 1 1 1.00 1 1
.......TTGTTCAAGGAAGCAAGAGATCCCGCTCCTT............................................................................................................................................................................................................... 31 1 1 1.00 1 1
...................................CTAAGCTTCGCTGGTCAGTATGGCT......................................................................................................................................................................................... 25 0 1 1.00 1 1
......................................................................TAGTGGTAAGAGCCCTCCCCTGGCTTGGTAGGT.............................................................................................................................................. 33 1 1 1.00 1 1
..............................................................................................................................................................................TGTCTGCCATCTTTGATGTTCTTCAGGGCCT........................................ 31 1 1 1.00 1 1
.....................................................................................................................................................................................................................TTTACTGGGTCATGTTTCTCCACT........ 24 0 1 1.00 1 1
......CTTGTTCAAGGAAGCAAGAGATCCCGCTCC................................................................................................................................................................................................................. 30 1 1 1.00 1 1
..........................................................................................TGGCTTGGTAGGAGCAGTACTGGGATCTA.............................................................................................................................. 29 2 1 1.00 1 1
..................................................................................................................................................................................................................TCGTTTACTGGGTCATGTTTCTCCACTGT...... 29 0 1 1.00 1 1
.........................................................................................................................................TGACTGTTGGGGTTTGGAGTGTTTGACACGT............................................................................. 31 2 1 1.00 1 1
...........................................................................................................................TGATGTCTGCTGTGTGACTGTTGGGT................................................................................................ 26 1 1 1.00 1 1
..............................................................................................................................................................................TGTCTGCCATCTTTGATGTTCATCAGGGC.......................................... 29 1 1 1.00 1 1
..................................................................................................................................................................................TGCCATCTTTGATGTTGTTCAGGGC.......................................... 25 1 1 1.00 1 1
..............................................................................................................................TGTCTGCTGTGTGACTGTTGGGGTTT............................................................................................. 26 1 1 1.00 1 1
..........................................................................................TGGCTTGGTAGGAGCAGTACTGGGATCAGT............................................................................................................................. 30 1 1 1.00 1 1
........................................................................................................................TGCTGATGTCTGCTGTGTGACTGTTGGG................................................................................................. 28 0 1 1.00 1 1
.............................................................................................................................................................................GTGTCTGCCATCTTTGATGTTCTTCAG............................................. 27 0 1 1.00 1 1
......................................................................................................................................................TTGGAGTGTTTGACACGGGGGAGGGGTCT.................................................................. 29 1 1 1.00 1 1
..............................................................................................................................................................................................TGTTCTTCAGGGCCCCCACATCGTTTACTG......................... 30 0 1 1.00 1 1
..............................................................................................................................................................................TGTCTGCCATCTTTGATGTTCTTCAGGGCTT........................................ 31 2 1 1.00 1 1

Anti-sense strand reads

AACCCTTAACAAGTTCCTTCGTTCTCTAGGGCGAGGATTCGAAGCGACCAGTCATACCGATCTACGTGGTATCACCATTCTCGGGAGGGGACCGAACCATCCTCGTCATGACCCTAGTCGACGACTACAGACGACACACTGACAACCCGAAACCTCACAAACTGTGCCCCCTCCACAGACGGTAGAAACTACAAGAAGTCCCGGGGGTGTAGCAAATGACCCAGTACAAAGAGGTGACAGGGTGT

**********************************************************************************...............(((((((.((.........(((((((.......((..(((((...((((((((....))).)))))....)))))..)).......))))))))).))))))).******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................................................................................................................................................AGTCCCGGGGGTGTAGCAAATGACCCAGTACA................. 32 0 1 1.00 1 1

Generated: 09/01/2015 at 11:58 AM